RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 MRPS6P82932 125 aaKnown RBP10.61□□□□□ -0.71
TMEM39A-208ENST00000486159 CAMK1Q14012 370 aa10.61□□□□□ -0.71
TMEM39A-208ENST00000486159 CLUL1Q15846 466 aa10.61□□□□□ -0.71
TMEM39A-208ENST00000486159 PKN1Q16512 942 aa10.61□□□□□ -0.71
TMEM39A-208ENST00000486159 LEXMQ3ZCV2 418 aa10.61□□□□□ -0.71
TMEM39A-208ENST00000486159 PAN2Q504Q3 1202 aaKnown RBP10.61□□□□□ -0.71
TMEM39A-208ENST00000486159 CEP55Q53EZ4 464 aa10.61□□□□□ -0.71
TMEM39A-208ENST00000486159 FOXD4L5Q5VV16 416 aaPredicted RBP10.61□□□□□ -0.71
TMEM39A-208ENST00000486159 TAF2Q6P1X5 1199 aa10.61□□□□□ -0.71
TMEM39A-208ENST00000486159 POTEBQ6S5H4 581 aa10.61□□□□□ -0.71
TMEM39A-208ENST00000486159 RPAINQ86UA6 219 aa10.61□□□□□ -0.71
TMEM39A-208ENST00000486159 CRIPAKQ8N1N5 446 aa10.61□□□□□ -0.71
TMEM39A-208ENST00000486159 FIBCD1Q8N539 461 aa10.61□□□□□ -0.71
TMEM39A-208ENST00000486159 FOXD4L4Q8WXT5 416 aaPredicted RBP10.61□□□□□ -0.71
TMEM39A-208ENST00000486159 APBB2Q92870 758 aa10.61□□□□□ -0.71
TMEM39A-208ENST00000486159 ZNF689Q96CS4 500 aaPredicted RBP10.61□□□□□ -0.71
TMEM39A-208ENST00000486159 CDHR1Q96JP9 859 aa10.61□□□□□ -0.71
TMEM39A-208ENST00000486159 ALG13Q9NP73 1137 aaKnown RBP10.61□□□□□ -0.71
TMEM39A-208ENST00000486159 HCSTQ9UBK5 93 aa10.61□□□□□ -0.71
TMEM39A-208ENST00000486159 PCDHGC5Q9Y5F6 944 aa10.61□□□□□ -0.71
TMEM39A-208ENST00000486159 MRPL42Q9Y6G3 142 aaKnown RBP10.61□□□□□ -0.71
TMEM39A-208ENST00000486159 RALGAPA2Q2PPJ7 1873 aa10.61□□□□□ -0.71
TMEM39A-208ENST00000486159 TTC3P53804 2025 aa10.6□□□□□ -0.71
TMEM39A-208ENST00000486159 EVPLQ92817 2033 aa10.6□□□□□ -0.71
TMEM39A-208ENST00000486159 C5orf42Q9H799 3197 aa10.6□□□□□ -0.71
TMEM39A-208ENST00000486159 MYO7AQ13402 2215 aa10.6□□□□□ -0.71
TMEM39A-208ENST00000486159 IGLV3-22A0A075B6J6 115 aa10.6□□□□□ -0.71
TMEM39A-208ENST00000486159 MEIS1O00470 390 aa10.6□□□□□ -0.71
TMEM39A-208ENST00000486159 JAK2O60674 1132 aa10.6□□□□□ -0.71
TMEM39A-208ENST00000486159 DGKIO75912 1065 aa10.6□□□□□ -0.71
TMEM39A-208ENST00000486159 ATG7O95352 703 aa10.6□□□□□ -0.71
TMEM39A-208ENST00000486159 KLRC1P26715 233 aa10.6□□□□□ -0.71
TMEM39A-208ENST00000486159 BMPR1AP36894 532 aa10.6□□□□□ -0.71
TMEM39A-208ENST00000486159 STAT5BP51692 787 aa10.6□□□□□ -0.71
TMEM39A-208ENST00000486159 ZNF445P59923 1031 aa10.6□□□□□ -0.71
TMEM39A-208ENST00000486159 CCT2P78371 535 aaKnown RBP10.6□□□□□ -0.71
TMEM39A-208ENST00000486159 HYAL1Q12794 435 aa10.6□□□□□ -0.71
TMEM39A-208ENST00000486159 PTCRAQ6ISU1 281 aaPredicted RBP10.6□□□□□ -0.71
TMEM39A-208ENST00000486159 MTHFD1LQ6UB35 978 aa10.6□□□□□ -0.71
TMEM39A-208ENST00000486159 ABHD15Q6UXT9 468 aa10.6□□□□□ -0.71
TMEM39A-208ENST00000486159 TSHZ1Q6ZSZ6 1077 aa10.6□□□□□ -0.71
TMEM39A-208ENST00000486159 CCDC60Q8IWA6 550 aaPredicted RBP10.6□□□□□ -0.71
TMEM39A-208ENST00000486159 NEK9Q8TD19 979 aa10.6□□□□□ -0.71
TMEM39A-208ENST00000486159 TMEM40Q8WWA1 233 aa10.6□□□□□ -0.71
TMEM39A-208ENST00000486159 PHKBQ93100 1093 aa10.6□□□□□ -0.71
TMEM39A-208ENST00000486159 GJA10Q969M2 543 aa10.6□□□□□ -0.71
TMEM39A-208ENST00000486159 ZNF396Q96N95 335 aaPredicted RBP10.6□□□□□ -0.71
TMEM39A-208ENST00000486159 IGFLR1Q9H665 355 aa10.6□□□□□ -0.71
TMEM39A-208ENST00000486159 RBM28Q9NW13 759 aaKnown RBP10.6□□□□□ -0.71
TMEM39A-208ENST00000486159 BARHL2Q9NY43 387 aa10.6□□□□□ -0.71
TMEM39A-208ENST00000486159 PADI3Q9ULW8 664 aa10.6□□□□□ -0.71
TMEM39A-208ENST00000486159 TRPV2Q9Y5S1 764 aa10.6□□□□□ -0.71
TMEM39A-208ENST00000486159 NFASCO94856 1347 aa10.59□□□□□ -0.71
TMEM39A-208ENST00000486159 ADGRA3Q8IWK6 1321 aa10.59□□□□□ -0.71
TMEM39A-208ENST00000486159 IGKV6D-21A0A0A0MT36 114 aa10.59□□□□□ -0.71
TMEM39A-208ENST00000486159 GRXCR2A6NFK2 248 aa10.59□□□□□ -0.71
TMEM39A-208ENST00000486159 ZBTB42B2RXF5 422 aa10.59□□□□□ -0.71
TMEM39A-208ENST00000486159 MAFGO15525 162 aa10.59□□□□□ -0.71
TMEM39A-208ENST00000486159 IRS1P35568 1242 aa10.59□□□□□ -0.71
TMEM39A-208ENST00000486159 ZNF76P36508 570 aa10.59□□□□□ -0.71
TMEM39A-208ENST00000486159 SREBF1P36956 1147 aa10.59□□□□□ -0.71
TMEM39A-208ENST00000486159 MRE11P49959 708 aa10.59□□□□□ -0.71
TMEM39A-208ENST00000486159 RESTQ13127 1097 aa10.59□□□□□ -0.71
TMEM39A-208ENST00000486159 BTG3Q14201 252 aaPredicted RBP10.59□□□□□ -0.71
TMEM39A-208ENST00000486159 SWSAP1Q6NVH7 229 aa10.59□□□□□ -0.71
TMEM39A-208ENST00000486159 PLPPR4Q7Z2D5 763 aa10.59□□□□□ -0.71
TMEM39A-208ENST00000486159 BRAPQ7Z569 592 aa10.59□□□□□ -0.71
TMEM39A-208ENST00000486159 ADGRD2Q7Z7M1 963 aa10.59□□□□□ -0.71
TMEM39A-208ENST00000486159 PLA2G4DQ86XP0 818 aa10.59□□□□□ -0.71
TMEM39A-208ENST00000486159 FAM178BQ8IXR5 827 aa10.59□□□□□ -0.71
TMEM39A-208ENST00000486159 CRYGNQ8WXF5 182 aa10.59□□□□□ -0.71
TMEM39A-208ENST00000486159 SLC39A7Q92504 469 aa10.59□□□□□ -0.71
TMEM39A-208ENST00000486159 ZNF668Q96K58 619 aaPredicted RBP10.59□□□□□ -0.71
TMEM39A-208ENST00000486159 SDF4Q9BRK5 362 aa10.59□□□□□ -0.71
TMEM39A-208ENST00000486159 CELF4Q9BZC1 486 aaKnown RBP10.59□□□□□ -0.71
TMEM39A-208ENST00000486159 CLDND1Q9NY35 253 aa10.59□□□□□ -0.71
TMEM39A-208ENST00000486159 ORC3Q9UBD5 711 aaPredicted RBP10.59□□□□□ -0.71
TMEM39A-208ENST00000486159 GINS2Q9Y248 185 aa10.59□□□□□ -0.71
TMEM39A-208ENST00000486159 NOC2LQ9Y3T9 749 aaKnown RBP10.59□□□□□ -0.71
TMEM39A-208ENST00000486159 PCDHA2Q9Y5H9 948 aa10.59□□□□□ -0.71
TMEM39A-208ENST00000486159 BRWD1Q9NSI6 2320 aa10.59□□□□□ -0.71
TMEM39A-208ENST00000486159 MYH15Q9Y2K3 1946 aa10.58□□□□□ -0.72
TMEM39A-208ENST00000486159 PLXNA4Q9HCM2 1894 aa10.58□□□□□ -0.72
TMEM39A-208ENST00000486159 RRN3P2A6NIE6 340 aa10.58□□□□□ -0.72
TMEM39A-208ENST00000486159 C5orf67F2Z3F1 127 aa10.58□□□□□ -0.72
TMEM39A-208ENST00000486159 IFNAR1P17181 557 aa10.58□□□□□ -0.72
TMEM39A-208ENST00000486159 RBM10P98175 930 aaKnown RBP10.58□□□□□ -0.72
TMEM39A-208ENST00000486159 DNM1Q05193 864 aaKnown RBP10.58□□□□□ -0.72
TMEM39A-208ENST00000486159 NFX1Q12986 1120 aaKnown RBP10.58□□□□□ -0.72
TMEM39A-208ENST00000486159 NTRK3Q16288 839 aa10.58□□□□□ -0.72
TMEM39A-208ENST00000486159 PTPROQ16827 1216 aa10.58□□□□□ -0.72
TMEM39A-208ENST00000486159 PFKFB3Q16875 520 aaPredicted RBP10.58□□□□□ -0.72
TMEM39A-208ENST00000486159 FAM102BQ5T8I3 360 aa10.58□□□□□ -0.72
TMEM39A-208ENST00000486159 RSPH3Q86UC2 560 aa10.58□□□□□ -0.72
TMEM39A-208ENST00000486159 TRIM22Q8IYM9 498 aa10.58□□□□□ -0.72
TMEM39A-208ENST00000486159 KIAA0319LQ8IZA0 1049 aa10.58□□□□□ -0.72
TMEM39A-208ENST00000486159 GJD3Q8N144 294 aa10.58□□□□□ -0.72
TMEM39A-208ENST00000486159 FBXO18Q8NFZ0 1043 aa10.58□□□□□ -0.72
TMEM39A-208ENST00000486159 GPT2Q8TD30 523 aa10.58□□□□□ -0.72
TMEM39A-208ENST00000486159 CLP1Q92989 425 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms