RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 RPUSD2Q8IZ73 545 aaKnown RBP8□□□□□ -1.13
SMC4-217ENST00000485867 SHISA5Q8N114 240 aa8□□□□□ -1.13
SMC4-217ENST00000485867 FBXL6Q8N531 539 aa8□□□□□ -1.13
SMC4-217ENST00000485867 MSL3Q8N5Y2 521 aaKnown RBP8□□□□□ -1.13
SMC4-217ENST00000485867 SLC43A3Q8NBI5 491 aa8□□□□□ -1.13
SMC4-217ENST00000485867 FBLIM1Q8WUP2 373 aa8□□□□□ -1.13
SMC4-217ENST00000485867 NEUROD6Q96NK8 337 aa8□□□□□ -1.13
SMC4-217ENST00000485867 TUT1Q9H6E5 874 aaKnown RBP8□□□□□ -1.13
SMC4-217ENST00000485867 UBE2ZQ9H832 354 aaPredicted RBP8□□□□□ -1.13
SMC4-217ENST00000485867 LIN7BQ9HAP6 207 aa8□□□□□ -1.13
SMC4-217ENST00000485867 ZHX1Q9UKY1 873 aaPredicted RBP8□□□□□ -1.13
SMC4-217ENST00000485867 MYO7AQ13402 2215 aa8□□□□□ -1.13
SMC4-217ENST00000485867 USP34Q70CQ2 3546 aa8□□□□□ -1.13
SMC4-217ENST00000485867 TRIP12Q14669 1992 aaPredicted RBP7.99□□□□□ -1.13
SMC4-217ENST00000485867 WNT11O96014 354 aa7.99□□□□□ -1.13
SMC4-217ENST00000485867 CTSBP07858 339 aa7.99□□□□□ -1.13
SMC4-217ENST00000485867 UQCRFS1P1P0C7P4 283 aa7.99□□□□□ -1.13
SMC4-217ENST00000485867 IL9P15248 144 aa7.99□□□□□ -1.13
SMC4-217ENST00000485867 ARHGAP4P98171 946 aa7.99□□□□□ -1.13
SMC4-217ENST00000485867 CPSF6Q16630 551 aaKnown RBP eCLIP7.99□□□□□ -1.13
SMC4-217ENST00000485867 LEXMQ3ZCV2 418 aa7.99□□□□□ -1.13
SMC4-217ENST00000485867 CCDC184Q52MB2 194 aa7.99□□□□□ -1.13
SMC4-217ENST00000485867 GORABQ5T7V8 394 aa7.99□□□□□ -1.13
SMC4-217ENST00000485867 B4GALNT3Q6L9W6 998 aa7.99□□□□□ -1.13
SMC4-217ENST00000485867 KMT2EQ8IZD2 1858 aa7.99□□□□□ -1.13
SMC4-217ENST00000485867 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.99□□□□□ -1.13
SMC4-217ENST00000485867 EZH1Q92800 747 aaPredicted RBP7.99□□□□□ -1.13
SMC4-217ENST00000485867 SCLYQ96I15 445 aa7.99□□□□□ -1.13
SMC4-217ENST00000485867 SPC25Q9HBM1 224 aa7.99□□□□□ -1.13
SMC4-217ENST00000485867 BRPF3Q9ULD4 1205 aa7.99□□□□□ -1.13
SMC4-217ENST00000485867 ZFHX2Q9C0A1 2572 aaPredicted RBP7.99□□□□□ -1.13
SMC4-217ENST00000485867 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.98□□□□□ -1.13
SMC4-217ENST00000485867 PAX4O43316 350 aa7.98□□□□□ -1.13
SMC4-217ENST00000485867 PFKMP08237 780 aa7.98□□□□□ -1.13
SMC4-217ENST00000485867 ADH5P11766 374 aa7.98□□□□□ -1.13
SMC4-217ENST00000485867 MAOBP27338 520 aa7.98□□□□□ -1.13
SMC4-217ENST00000485867 COPB2P35606 906 aa7.98□□□□□ -1.13
SMC4-217ENST00000485867 USP11P51784 963 aa7.98□□□□□ -1.13
SMC4-217ENST00000485867 NKX3-2P78367 333 aa7.98□□□□□ -1.13
SMC4-217ENST00000485867 BEX3Q00994 111 aa7.98□□□□□ -1.13
SMC4-217ENST00000485867 GABPAQ06546 454 aa7.98□□□□□ -1.13
SMC4-217ENST00000485867 NFKBIBQ15653 356 aa7.98□□□□□ -1.13
SMC4-217ENST00000485867 MSMPQ1L6U9 139 aa7.98□□□□□ -1.13
SMC4-217ENST00000485867 CCDC144BQ3MJ40 725 aa7.98□□□□□ -1.13
SMC4-217ENST00000485867 KIAA0319Q5VV43 1072 aa7.98□□□□□ -1.13
SMC4-217ENST00000485867 PAOXQ6QHF9 649 aa7.98□□□□□ -1.13
SMC4-217ENST00000485867 CXCL17Q6UXB2 119 aa7.98□□□□□ -1.13
SMC4-217ENST00000485867 MAMDC4Q6UXC1 1216 aa7.98□□□□□ -1.13
SMC4-217ENST00000485867 TTC6Q86TZ1 520 aa7.98□□□□□ -1.13
SMC4-217ENST00000485867 SPICE1Q8N0Z3 855 aa7.98□□□□□ -1.13
SMC4-217ENST00000485867 PRSS33Q8NF86 280 aa7.98□□□□□ -1.13
SMC4-217ENST00000485867 GIMAP7Q8NHV1 300 aa7.98□□□□□ -1.13
SMC4-217ENST00000485867 GDPD5Q8WTR4 605 aa7.98□□□□□ -1.13
SMC4-217ENST00000485867 SLC9A7Q96T83 725 aa7.98□□□□□ -1.13
SMC4-217ENST00000485867 TRPV6Q9H1D0 765 aa7.98□□□□□ -1.13
SMC4-217ENST00000485867 GOLGA2P5Q9HBQ8 144 aa7.98□□□□□ -1.13
SMC4-217ENST00000485867 LMCD1Q9NZU5 365 aa7.98□□□□□ -1.13
SMC4-217ENST00000485867 ZNF214Q9UL59 606 aaPredicted RBP7.98□□□□□ -1.13
SMC4-217ENST00000485867 ADAMTS5Q9UNA0 930 aa7.98□□□□□ -1.13
SMC4-217ENST00000485867 GRIN2DO15399 1336 aa7.98□□□□□ -1.13
SMC4-217ENST00000485867 DNAJC25-GNG10A0A024R161 153 aa7.97□□□□□ -1.13
SMC4-217ENST00000485867 WDR46O15213 610 aaKnown RBP7.97□□□□□ -1.13
SMC4-217ENST00000485867 B4GALT4O60513 344 aa7.97□□□□□ -1.13
SMC4-217ENST00000485867 FOSL1P15407 271 aa7.97□□□□□ -1.13
SMC4-217ENST00000485867 KCNA5P22460 613 aa7.97□□□□□ -1.13
SMC4-217ENST00000485867 STAT3P40763 770 aa7.97□□□□□ -1.13
SMC4-217ENST00000485867 PLCD1P51178 756 aa7.97□□□□□ -1.13
SMC4-217ENST00000485867 ITGA7Q13683 1181 aa7.97□□□□□ -1.13
SMC4-217ENST00000485867 ACVR2BQ13705 512 aa7.97□□□□□ -1.13
SMC4-217ENST00000485867 GLYCTKQ8IVS8 523 aa7.97□□□□□ -1.13
SMC4-217ENST00000485867 HERC6Q8IVU3 1022 aa7.97□□□□□ -1.13
SMC4-217ENST00000485867 REPS2Q8NFH8 660 aa7.97□□□□□ -1.13
SMC4-217ENST00000485867 FAM129BQ96TA1 746 aa7.97□□□□□ -1.13
SMC4-217ENST00000485867 TRIM56Q9BRZ2 755 aaKnown RBP7.97□□□□□ -1.13
SMC4-217ENST00000485867 OSBPL1AQ9BXW6 950 aa7.97□□□□□ -1.13
SMC4-217ENST00000485867 FBXO28Q9NVF7 368 aa7.97□□□□□ -1.13
SMC4-217ENST00000485867 ACTL7BQ9Y614 415 aa7.97□□□□□ -1.13
SMC4-217ENST00000485867 PLXNA3P51805 1871 aa7.97□□□□□ -1.13
SMC4-217ENST00000485867 BAZ2AQ9UIF9 1905 aaKnown RBP7.97□□□□□ -1.13
SMC4-217ENST00000485867 ASTN1O14525 1302 aa7.97□□□□□ -1.13
SMC4-217ENST00000485867 ZNF536O15090 1300 aa7.97□□□□□ -1.13
SMC4-217ENST00000485867 SCN10AQ9Y5Y9 1956 aa7.97□□□□□ -1.13
SMC4-217ENST00000485867 ATG2AQ2TAZ0 1938 aa7.96□□□□□ -1.13
SMC4-217ENST00000485867 TRIOO75962 3097 aa7.96□□□□□ -1.14
SMC4-217ENST00000485867 VWA5AO00534 786 aa7.96□□□□□ -1.14
SMC4-217ENST00000485867 MPHOSPH10O00566 681 aaKnown RBP7.96□□□□□ -1.14
SMC4-217ENST00000485867 IGSF3O75054 1194 aa7.96□□□□□ -1.14
SMC4-217ENST00000485867 CABYRO75952 493 aa7.96□□□□□ -1.14
SMC4-217ENST00000485867 B3GALT4O96024 378 aa7.96□□□□□ -1.14
SMC4-217ENST00000485867 CYP11A1P05108 521 aa7.96□□□□□ -1.14
SMC4-217ENST00000485867 CYP7A1P22680 504 aa7.96□□□□□ -1.14
SMC4-217ENST00000485867 ADMP35318 185 aa7.96□□□□□ -1.14
SMC4-217ENST00000485867 POU4F3Q15319 338 aa7.96□□□□□ -1.14
SMC4-217ENST00000485867 TMEM179Q6ZVK1 233 aa7.96□□□□□ -1.14
SMC4-217ENST00000485867 DEFB128Q7Z7B8 93 aa7.96□□□□□ -1.14
SMC4-217ENST00000485867 SIAH1Q8IUQ4 282 aa7.96□□□□□ -1.14
SMC4-217ENST00000485867 MIGA1Q8NAN2 632 aa7.96□□□□□ -1.14
SMC4-217ENST00000485867 PHOSPHO2Q8TCD6 241 aa7.96□□□□□ -1.14
SMC4-217ENST00000485867 SSH1Q8WYL5 1049 aa7.96□□□□□ -1.14
SMC4-217ENST00000485867 GATA6Q92908 595 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms