RNA–Protein interactions for RNA: ENST00000484822.1

RXRA-203, Transcript of retinoid X receptor alpha, humanhuman

TSL 2

Gene RXRA, Length 5,215 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-203ENST00000484822 PNMA3Q9UL41 463 aa16.24■□□□□ 0.19
RXRA-203ENST00000484822 CLRN2A0PK11 232 aa16.23■□□□□ 0.19
RXRA-203ENST00000484822 SH2B2O14492 632 aaPredicted RBP16.23■□□□□ 0.19
RXRA-203ENST00000484822 ALAS1P13196 640 aa16.23■□□□□ 0.19
RXRA-203ENST00000484822 CHMP6Q96FZ7 201 aa16.23■□□□□ 0.19
RXRA-203ENST00000484822 CFAP36Q96G28 342 aa16.23■□□□□ 0.19
RXRA-203ENST00000484822 DDX47Q9H0S4 455 aaKnown RBP16.23■□□□□ 0.19
RXRA-203ENST00000484822 POLD4Q9HCU8 107 aa16.23■□□□□ 0.19
RXRA-203ENST00000484822 MINPP1Q9UNW1 487 aa16.23■□□□□ 0.19
RXRA-203ENST00000484822 ORC6Q9Y5N6 252 aa16.23■□□□□ 0.19
RXRA-203ENST00000484822 NBPF26B4DH59 902 aa16.23■□□□□ 0.19
RXRA-203ENST00000484822 TEX33O43247 280 aa16.23■□□□□ 0.19
RXRA-203ENST00000484822 EPHB1P54762 984 aa16.23■□□□□ 0.19
RXRA-203ENST00000484822 TXNRD1Q16881 649 aa16.23■□□□□ 0.19
RXRA-203ENST00000484822 RESP18Q5W5W9 173 aa16.23■□□□□ 0.19
RXRA-203ENST00000484822 EP400NLQ6ZTU2 488 aa16.23■□□□□ 0.19
RXRA-203ENST00000484822 MYLK4Q86YV6 388 aaPredicted RBP16.23■□□□□ 0.19
RXRA-203ENST00000484822 NBPF15Q8N660 670 aa16.23■□□□□ 0.19
RXRA-203ENST00000484822 TRIM11Q96F44 468 aa16.23■□□□□ 0.19
RXRA-203ENST00000484822 NUDCD1Q96RS6 583 aa16.23■□□□□ 0.19
RXRA-203ENST00000484822 OSBPL9Q96SU4 736 aa16.23■□□□□ 0.19
RXRA-203ENST00000484822 SAYSD1Q9NPB0 183 aa16.23■□□□□ 0.19
RXRA-203ENST00000484822 MEIS1O00470 390 aa16.23■□□□□ 0.19
RXRA-203ENST00000484822 HNRNPCP07910 306 aaKnown RBP eCLIP16.23■□□□□ 0.191e-5■□□□□ 9.8
RXRA-203ENST00000484822 KRT10P13645 584 aa16.23■□□□□ 0.19
RXRA-203ENST00000484822 MCAMP43121 646 aa16.23■□□□□ 0.19
RXRA-203ENST00000484822 ATG16L1Q676U5 607 aa16.23■□□□□ 0.19
RXRA-203ENST00000484822 PDIK1LQ8N165 341 aa16.23■□□□□ 0.19
RXRA-203ENST00000484822 LRRIQ4A6NIV6 560 aa16.23■□□□□ 0.19
RXRA-203ENST00000484822 RASSF10A6NK89 507 aa16.23■□□□□ 0.19
RXRA-203ENST00000484822 FAM160B1Q5W0V3 765 aa16.23■□□□□ 0.19
RXRA-203ENST00000484822 SPOPLQ6IQ16 392 aa16.23■□□□□ 0.19
RXRA-203ENST00000484822 DARS2Q6PI48 645 aaKnown RBP16.23■□□□□ 0.19
RXRA-203ENST00000484822 DNAAF3Q8N9W5 541 aa16.23■□□□□ 0.19
RXRA-203ENST00000484822 TEKT3Q9BXF9 490 aa16.23■□□□□ 0.19
RXRA-203ENST00000484822 SPDYE16A6NNV3 312 aaPredicted RBP16.22■□□□□ 0.19
RXRA-203ENST00000484822 PRKAB2O43741 272 aa16.22■□□□□ 0.19
RXRA-203ENST00000484822 SPDYE2Q495Y8 402 aa16.22■□□□□ 0.19
RXRA-203ENST00000484822 CENPUQ71F23 418 aa16.22■□□□□ 0.19
RXRA-203ENST00000484822 CRLF3Q8IUI8 442 aa16.22■□□□□ 0.19
RXRA-203ENST00000484822 FMR1NBQ8N0W7 255 aaPredicted RBP16.22■□□□□ 0.19
RXRA-203ENST00000484822 METTL13Q8N6R0 699 aa16.22■□□□□ 0.19
RXRA-203ENST00000484822 AMNQ9BXJ7 453 aa16.22■□□□□ 0.19
RXRA-203ENST00000484822 PI4KBQ9UBF8 816 aa16.22■□□□□ 0.19
RXRA-203ENST00000484822 WARS2Q9UGM6 360 aaKnown RBP16.22■□□□□ 0.19
RXRA-203ENST00000484822 GGT7Q9UJ14 662 aa16.22■□□□□ 0.19
RXRA-203ENST00000484822 TLK1Q9UKI8 766 aa16.22■□□□□ 0.19
RXRA-203ENST00000484822 ATF5Q9Y2D1 282 aaPredicted RBP16.22■□□□□ 0.19
RXRA-203ENST00000484822 HAUS5O94927 633 aa16.22■□□□□ 0.19
RXRA-203ENST00000484822 MTF1Q14872 753 aa16.22■□□□□ 0.19
RXRA-203ENST00000484822 NCAPG2Q86XI2 1143 aa16.22■□□□□ 0.19
RXRA-203ENST00000484822 ADPGKQ9BRR6 497 aa16.22■□□□□ 0.19
RXRA-203ENST00000484822 ADD3Q9UEY8 706 aaKnown RBP16.22■□□□□ 0.19
RXRA-203ENST00000484822 PODXLO00592 558 aa16.22■□□□□ 0.19
RXRA-203ENST00000484822 RWDD2BP57060 319 aa16.22■□□□□ 0.19
RXRA-203ENST00000484822 RGS9BPQ6ZS82 235 aa16.22■□□□□ 0.19
RXRA-203ENST00000484822 BARGINQ6ZT62 677 aa16.22■□□□□ 0.19
RXRA-203ENST00000484822 EXOC8Q8IYI6 725 aa16.22■□□□□ 0.19
RXRA-203ENST00000484822 ANO3Q9BYT9 981 aa16.22■□□□□ 0.19
RXRA-203ENST00000484822 UPF3AQ9H1J1 476 aaKnown RBP16.22■□□□□ 0.19
RXRA-203ENST00000484822 SUGCTQ9HAC7 445 aa16.22■□□□□ 0.19
RXRA-203ENST00000484822 IQANK1A0A1B0GTG1 560 aa16.22■□□□□ 0.19
RXRA-203ENST00000484822 LGALS16A8MUM7 142 aa16.22■□□□□ 0.19
RXRA-203ENST00000484822 MDM2Q00987 491 aaPredicted RBP16.22■□□□□ 0.19
RXRA-203ENST00000484822 CDR2Q01850 454 aa16.22■□□□□ 0.19
RXRA-203ENST00000484822 GFPT1Q06210 699 aaPredicted RBP16.22■□□□□ 0.19
RXRA-203ENST00000484822 RC3H1Q5TC82 1133 aaKnown RBP16.22■□□□□ 0.19
RXRA-203ENST00000484822 CIAPIN1Q6FI81 312 aa16.22■□□□□ 0.19
RXRA-203ENST00000484822 EPM2AIP1Q7L775 607 aaPredicted RBP16.22■□□□□ 0.19
RXRA-203ENST00000484822 SH2D3CQ8N5H7 860 aa16.22■□□□□ 0.19
RXRA-203ENST00000484822 CCNYQ8ND76 341 aa16.22■□□□□ 0.19
RXRA-203ENST00000484822 IL17RAQ96F46 866 aa16.22■□□□□ 0.19
RXRA-203ENST00000484822 FAM161BQ96MY7 647 aa16.22■□□□□ 0.19
RXRA-203ENST00000484822 MIS12Q9H081 205 aa16.22■□□□□ 0.19
RXRA-203ENST00000484822 ZSWIM5Q9P217 1185 aa16.22■□□□□ 0.19
RXRA-203ENST00000484822 RAD17O75943 681 aa16.22■□□□□ 0.19
RXRA-203ENST00000484822 BRAFP15056 766 aa16.22■□□□□ 0.19
RXRA-203ENST00000484822 ELF1P32519 619 aa16.22■□□□□ 0.19
RXRA-203ENST00000484822 RFX8Q6ZV50 586 aa16.22■□□□□ 0.19
RXRA-203ENST00000484822 KRT26Q7Z3Y9 468 aa16.22■□□□□ 0.19
RXRA-203ENST00000484822 NUDCD3Q8IVD9 361 aa16.22■□□□□ 0.19
RXRA-203ENST00000484822 DHX40Q8IX18 779 aaKnown RBP16.22■□□□□ 0.19
RXRA-203ENST00000484822 MED10Q9BTT4 135 aa16.22■□□□□ 0.19
RXRA-203ENST00000484822 USP32Q8NFA0 1604 aa16.21■□□□□ 0.19
RXRA-203ENST00000484822 TOB2Q14106 344 aaPredicted RBP16.21■□□□□ 0.19
RXRA-203ENST00000484822 BRIP1Q9BX63 1249 aa16.21■□□□□ 0.19
RXRA-203ENST00000484822 LRRC53A6NM62 1247 aa16.21■□□□□ 0.19
RXRA-203ENST00000484822 hCG_1984214I3L0E3 225 aa16.21■□□□□ 0.19
RXRA-203ENST00000484822 ATP1A1P05023 1023 aaKnown RBP16.21■□□□□ 0.19
RXRA-203ENST00000484822 PCYT1AP49585 367 aa16.21■□□□□ 0.19
RXRA-203ENST00000484822 ERFP50548 548 aa16.21■□□□□ 0.19
RXRA-203ENST00000484822 ZNF713Q8N859 430 aaPredicted RBP16.21■□□□□ 0.19
RXRA-203ENST00000484822 CFAP73A6NFT4 308 aa16.21■□□□□ 0.19
RXRA-203ENST00000484822 PPP1R37O75864 691 aa16.21■□□□□ 0.19
RXRA-203ENST00000484822 MCF2P10911 925 aa16.21■□□□□ 0.19
RXRA-203ENST00000484822 PMS2P54278 862 aa16.21■□□□□ 0.19
RXRA-203ENST00000484822 DEUP1Q05D60 604 aa16.21■□□□□ 0.19
RXRA-203ENST00000484822 WDR75Q8IWA0 830 aaKnown RBP16.21■□□□□ 0.19
RXRA-203ENST00000484822 ANKRD7Q92527 254 aa16.21■□□□□ 0.19
RXRA-203ENST00000484822 TGS1Q96RS0 853 aaKnown RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms