RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 ZCCHC8Q6NZY4 707 aaKnown RBP6.14□□□□□ -1.43
SMC4-215ENST00000484799 LARP4Q71RC2 724 aaKnown RBP eCLIP6.14□□□□□ -1.43
SMC4-215ENST00000484799 NME9Q86XW9 330 aa6.14□□□□□ -1.43
SMC4-215ENST00000484799 JMYQ8N9B5 988 aa6.14□□□□□ -1.43
SMC4-215ENST00000484799 GCDHQ92947 438 aaPredicted RBP6.14□□□□□ -1.43
SMC4-215ENST00000484799 GFM2Q969S9 779 aaKnown RBP6.14□□□□□ -1.43
SMC4-215ENST00000484799 DRC1Q96MC2 740 aa6.14□□□□□ -1.43
SMC4-215ENST00000484799 TUBGCP5Q96RT8 1024 aa6.14□□□□□ -1.43
SMC4-215ENST00000484799 PLA2G12BQ9BX93 195 aa6.14□□□□□ -1.43
SMC4-215ENST00000484799 IFT57Q9NWB7 429 aa6.14□□□□□ -1.43
SMC4-215ENST00000484799 ZKSCAN5Q9Y2L8 839 aa6.14□□□□□ -1.43
SMC4-215ENST00000484799 HS3ST3A1Q9Y663 406 aa6.14□□□□□ -1.43
SMC4-215ENST00000484799 PTPDC1A2A3K4 754 aa6.13□□□□□ -1.43
SMC4-215ENST00000484799 DAPK3O43293 454 aa6.13□□□□□ -1.43
SMC4-215ENST00000484799 HMGA2P52926 109 aa6.13□□□□□ -1.43
SMC4-215ENST00000484799 SLC6A3Q01959 620 aa6.13□□□□□ -1.43
SMC4-215ENST00000484799 GRM7Q14831 915 aa6.13□□□□□ -1.43
SMC4-215ENST00000484799 CDSNQ15517 529 aa6.13□□□□□ -1.43
SMC4-215ENST00000484799 CFAP100Q494V2 611 aa6.13□□□□□ -1.43
SMC4-215ENST00000484799 TRIM68Q6AZZ1 485 aa6.13□□□□□ -1.43
SMC4-215ENST00000484799 TIGD7Q6NT04 549 aaPredicted RBP6.13□□□□□ -1.43
SMC4-215ENST00000484799 KLHDC10Q6PID8 442 aa6.13□□□□□ -1.43
SMC4-215ENST00000484799 EDAQ92838 391 aa6.13□□□□□ -1.43
SMC4-215ENST00000484799 LPPQ93052 612 aa6.13□□□□□ -1.43
SMC4-215ENST00000484799 WWC2-AS2Q96NR7 200 aa6.13□□□□□ -1.43
SMC4-215ENST00000484799 ZNF747Q9BV97 191 aa6.13□□□□□ -1.43
SMC4-215ENST00000484799 TRIM39Q9HCM9 518 aa6.13□□□□□ -1.43
SMC4-215ENST00000484799 PLA2G3Q9NZ20 509 aa6.13□□□□□ -1.43
SMC4-215ENST00000484799 MPIG6BO95866 241 aa6.12□□□□□ -1.43
SMC4-215ENST00000484799 KCNA6P17658 529 aa6.12□□□□□ -1.43
SMC4-215ENST00000484799 MSX2P35548 267 aaPredicted RBP6.12□□□□□ -1.43
SMC4-215ENST00000484799 ALDH6A1Q02252 535 aaKnown RBP6.12□□□□□ -1.43
SMC4-215ENST00000484799 TTC38Q5R3I4 469 aa6.12□□□□□ -1.43
SMC4-215ENST00000484799 PIK3R6Q5UE93 754 aa6.12□□□□□ -1.43
SMC4-215ENST00000484799 KANK2Q63ZY3 851 aa6.12□□□□□ -1.43
SMC4-215ENST00000484799 TMEM200BQ69YZ2 307 aa6.12□□□□□ -1.43
SMC4-215ENST00000484799 C1orf210Q8IVY1 113 aa6.12□□□□□ -1.43
SMC4-215ENST00000484799 THEMISQ8N1K5 641 aaPredicted RBP6.12□□□□□ -1.43
SMC4-215ENST00000484799 D2HGDHQ8N465 521 aa6.12□□□□□ -1.43
SMC4-215ENST00000484799 CHST14Q8NCH0 376 aa6.12□□□□□ -1.43
SMC4-215ENST00000484799 SHCBP1Q8NEM2 672 aa6.12□□□□□ -1.43
SMC4-215ENST00000484799 RPGRQ92834 1020 aaKnown RBP6.12□□□□□ -1.43
SMC4-215ENST00000484799 TMEM176AQ96HP8 235 aa6.12□□□□□ -1.43
SMC4-215ENST00000484799 FOXB1Q99853 325 aa6.12□□□□□ -1.43
SMC4-215ENST00000484799 VWA7Q9Y334 891 aa6.12□□□□□ -1.43
SMC4-215ENST00000484799 TNPO3Q9Y5L0 923 aaKnown RBP6.12□□□□□ -1.43
SMC4-215ENST00000484799 A0A1W2PRX2 142 aa6.11□□□□□ -1.43
SMC4-215ENST00000484799 UBA6A0AVT1 1052 aaPredicted RBP6.11□□□□□ -1.43
SMC4-215ENST00000484799 CYR61O00622 381 aa6.11□□□□□ -1.43
SMC4-215ENST00000484799 CYP27B1O15528 508 aa6.11□□□□□ -1.43
SMC4-215ENST00000484799 SLC26A4O43511 780 aa6.11□□□□□ -1.43
SMC4-215ENST00000484799 ASMTLO95671 621 aa6.11□□□□□ -1.43
SMC4-215ENST00000484799 FNTBP49356 437 aa6.11□□□□□ -1.43
SMC4-215ENST00000484799 NEK4P51957 841 aa6.11□□□□□ -1.43
SMC4-215ENST00000484799 ADAM15Q13444 863 aa6.11□□□□□ -1.43
SMC4-215ENST00000484799 FOXE3Q13461 319 aa6.11□□□□□ -1.43
SMC4-215ENST00000484799 DGKDQ16760 1214 aa6.11□□□□□ -1.43
SMC4-215ENST00000484799 CATSPEREQ5SY80 951 aa6.11□□□□□ -1.43
SMC4-215ENST00000484799 PRAMEF9Q5VWM5 478 aa6.11□□□□□ -1.43
SMC4-215ENST00000484799 KRT40Q6A162 431 aa6.11□□□□□ -1.43
SMC4-215ENST00000484799 SLFN12LQ6IEE8 588 aa6.11□□□□□ -1.43
SMC4-215ENST00000484799 ABHD17CQ6PCB6 329 aa6.11□□□□□ -1.43
SMC4-215ENST00000484799 ADGRE4PQ86SQ3 457 aa6.11□□□□□ -1.43
SMC4-215ENST00000484799 PASD1Q8IV76 773 aa6.11□□□□□ -1.43
SMC4-215ENST00000484799 GSPT2Q8IYD1 628 aaKnown RBP6.11□□□□□ -1.43
SMC4-215ENST00000484799 SH3TC2Q8TF17 1288 aa6.11□□□□□ -1.43
SMC4-215ENST00000484799 MAGEL2Q9UJ55 1249 aa6.11□□□□□ -1.43
SMC4-215ENST00000484799 DENND2AQ9ULE3 1009 aa6.11□□□□□ -1.43
SMC4-215ENST00000484799 RASSF10A6NK89 507 aa6.1□□□□□ -1.43
SMC4-215ENST00000484799 APOL3O95236 402 aa6.1□□□□□ -1.43
SMC4-215ENST00000484799 JMJD7P0C870 316 aa6.1□□□□□ -1.43
SMC4-215ENST00000484799 ZBTB48P10074 688 aaPredicted RBP6.1□□□□□ -1.43
SMC4-215ENST00000484799 ATP2C1P98194 919 aaPredicted RBP6.1□□□□□ -1.43
SMC4-215ENST00000484799 ADCY1Q08828 1119 aa6.1□□□□□ -1.43
SMC4-215ENST00000484799 CRHR2Q13324 411 aa6.1□□□□□ -1.43
SMC4-215ENST00000484799 SART3Q15020 963 aaKnown RBP6.1□□□□□ -1.43
SMC4-215ENST00000484799 TBR1Q16650 682 aa6.1□□□□□ -1.43
SMC4-215ENST00000484799 CRIP3Q6Q6R5 217 aa6.1□□□□□ -1.43
SMC4-215ENST00000484799 ZFPM1Q8IX07 1006 aa6.1□□□□□ -1.43
SMC4-215ENST00000484799 KIAA1958Q8N8K9 716 aa6.1□□□□□ -1.43
SMC4-215ENST00000484799 EXTL1Q92935 676 aa6.1□□□□□ -1.43
SMC4-215ENST00000484799 MAML3Q96JK9 1138 aa6.1□□□□□ -1.43
SMC4-215ENST00000484799 CLUHP3Q96NS8 147 aa6.1□□□□□ -1.43
SMC4-215ENST00000484799 MRIQ9BWK5 157 aa6.1□□□□□ -1.43
SMC4-215ENST00000484799 SLC30A1Q9Y6M5 507 aa6.1□□□□□ -1.43
SMC4-215ENST00000484799 CAPN14A8MX76 684 aa6.09□□□□□ -1.43
SMC4-215ENST00000484799 GAS7O60861 476 aa6.09□□□□□ -1.43
SMC4-215ENST00000484799 GLRX3O76003 335 aaKnown RBP6.09□□□□□ -1.43
SMC4-215ENST00000484799 FOXL1Q12952 345 aa6.09□□□□□ -1.43
SMC4-215ENST00000484799 R3HDM1Q15032 1099 aaKnown RBP6.09□□□□□ -1.43
SMC4-215ENST00000484799 TM4SF20Q53R12 229 aa6.09□□□□□ -1.43
SMC4-215ENST00000484799 CDCA2Q69YH5 1023 aaPredicted RBP6.09□□□□□ -1.43
SMC4-215ENST00000484799 RNF207Q6ZRF8 634 aa6.09□□□□□ -1.43
SMC4-215ENST00000484799 OTOP1Q7RTM1 612 aa6.09□□□□□ -1.43
SMC4-215ENST00000484799 SYNPOQ8N3V7 929 aa6.09□□□□□ -1.43
SMC4-215ENST00000484799 UBXN4Q92575 508 aa6.09□□□□□ -1.43
SMC4-215ENST00000484799 SORCS2Q96PQ0 1159 aa6.09□□□□□ -1.43
SMC4-215ENST00000484799 PLEKHG4BQ96PX9 1271 aa6.09□□□□□ -1.43
SMC4-215ENST00000484799 AURKAIP1Q9NWT8 199 aaPredicted RBP6.09□□□□□ -1.43
SMC4-215ENST00000484799 RBM8AQ9Y5S9 174 aaKnown RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms