RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 HBP1O60381 514 aa22.65■■□□□ 1.22
VCPKMT-203ENST00000484763 RFC5P40937 340 aa22.65■■□□□ 1.22
VCPKMT-203ENST00000484763 MRE11P49959 708 aa22.65■■□□□ 1.22
VCPKMT-203ENST00000484763 POLGP54098 1239 aaPredicted RBP22.65■■□□□ 1.22
VCPKMT-203ENST00000484763 KLHL10Q6JEL2 608 aa22.65■■□□□ 1.22
VCPKMT-203ENST00000484763 MAEAQ7L5Y9 396 aa22.65■■□□□ 1.22
VCPKMT-203ENST00000484763 DHX40Q8IX18 779 aaKnown RBP22.65■■□□□ 1.22
VCPKMT-203ENST00000484763 DAW1Q8N136 415 aa22.65■■□□□ 1.22
VCPKMT-203ENST00000484763 MYCT1Q8N699 235 aa22.65■■□□□ 1.22
VCPKMT-203ENST00000484763 AOPEPQ8N6M6 819 aa22.65■■□□□ 1.22
VCPKMT-203ENST00000484763 CEP89Q96ST8 783 aa22.65■■□□□ 1.22
VCPKMT-203ENST00000484763 POLD4Q9HCU8 107 aa22.65■■□□□ 1.22
VCPKMT-203ENST00000484763 OLFML3Q9NRN5 406 aa22.65■■□□□ 1.22
VCPKMT-203ENST00000484763 H3BRB1 525 aa22.64■■□□□ 1.22
VCPKMT-203ENST00000484763 RARBP10826 455 aa22.64■■□□□ 1.22
VCPKMT-203ENST00000484763 CCND3P30281 292 aaPredicted RBP22.64■■□□□ 1.22
VCPKMT-203ENST00000484763 EMC2Q15006 297 aa22.64■■□□□ 1.22
VCPKMT-203ENST00000484763 FAM102BQ5T8I3 360 aa22.64■■□□□ 1.22
VCPKMT-203ENST00000484763 SLC7A3Q8WY07 619 aa22.64■■□□□ 1.22
VCPKMT-203ENST00000484763 TUT1Q9H6E5 874 aaKnown RBP22.64■■□□□ 1.22
VCPKMT-203ENST00000484763 DHX33Q9H6R0 707 aaKnown RBP22.64■■□□□ 1.22
VCPKMT-203ENST00000484763 PDLIM7Q9NR12 457 aa22.64■■□□□ 1.22
VCPKMT-203ENST00000484763 TBC1D7Q9P0N9 293 aa22.64■■□□□ 1.22
VCPKMT-203ENST00000484763 CTNND2Q9UQB3 1225 aa22.64■■□□□ 1.22
VCPKMT-203ENST00000484763 MAPK8IP1Q9UQF2 711 aa22.64■■□□□ 1.22
VCPKMT-203ENST00000484763 CEP350Q5VT06 3117 aa22.64■■□□□ 1.21
VCPKMT-203ENST00000484763 SFI1A8K8P3 1242 aa22.64■■□□□ 1.21
VCPKMT-203ENST00000484763 PSMA7O14818 248 aa22.64■■□□□ 1.21
VCPKMT-203ENST00000484763 IKBKBO14920 756 aa22.64■■□□□ 1.21
VCPKMT-203ENST00000484763 GJA9P57773 515 aa22.64■■□□□ 1.21
VCPKMT-203ENST00000484763 MYL5Q02045 173 aa22.64■■□□□ 1.21
VCPKMT-203ENST00000484763 PAK1Q13153 545 aa22.64■■□□□ 1.21
VCPKMT-203ENST00000484763 FSCN1Q16658 493 aaKnown RBP22.64■■□□□ 1.21
VCPKMT-203ENST00000484763 KIFAP3Q92845 792 aa22.64■■□□□ 1.21
VCPKMT-203ENST00000484763 XPNPEP1Q9NQW7 623 aa22.64■■□□□ 1.21
VCPKMT-203ENST00000484763 LARSQ9P2J5 1176 aaKnown RBP22.64■■□□□ 1.21
VCPKMT-203ENST00000484763 SYNRGQ9UMZ2 1314 aa22.64■■□□□ 1.21
VCPKMT-203ENST00000484763 SMTNL1A8MU46 457 aa22.63■■□□□ 1.21
VCPKMT-203ENST00000484763 EXOC8Q8IYI6 725 aa22.63■■□□□ 1.21
VCPKMT-203ENST00000484763 GUF1Q8N442 669 aaKnown RBP22.63■■□□□ 1.21
VCPKMT-203ENST00000484763 UPF3AQ9H1J1 476 aaKnown RBP22.63■■□□□ 1.21
VCPKMT-203ENST00000484763 RNPEPQ9H4A4 650 aa22.63■■□□□ 1.21
VCPKMT-203ENST00000484763 MRPL44Q9H9J2 332 aaKnown RBP22.63■■□□□ 1.21
VCPKMT-203ENST00000484763 SPC25Q9HBM1 224 aa22.63■■□□□ 1.21
VCPKMT-203ENST00000484763 PTCH2Q9Y6C5 1203 aa22.63■■□□□ 1.21
VCPKMT-203ENST00000484763 GOLGA6L19H0YKK7 550 aa22.62■■□□□ 1.21
VCPKMT-203ENST00000484763 INHAP05111 366 aa22.62■■□□□ 1.21
VCPKMT-203ENST00000484763 GRK4P32298 578 aa22.62■■□□□ 1.21
VCPKMT-203ENST00000484763 TBC1D8BQ0IIM8 1120 aa22.62■■□□□ 1.21
VCPKMT-203ENST00000484763 UVSSAQ2YD98 709 aa22.62■■□□□ 1.21
VCPKMT-203ENST00000484763 ODR4Q5SWX8 454 aa22.62■■□□□ 1.21
VCPKMT-203ENST00000484763 DHTKD1Q96HY7 919 aaPredicted RBP22.62■■□□□ 1.21
VCPKMT-203ENST00000484763 GPRC5CQ9NQ84 441 aa22.62■■□□□ 1.21
VCPKMT-203ENST00000484763 HTTP42858 3142 aa22.62■■□□□ 1.21
VCPKMT-203ENST00000484763 COL1A2P08123 1366 aa22.62■■□□□ 1.21
VCPKMT-203ENST00000484763 ZBTB42B2RXF5 422 aa22.61■■□□□ 1.21
VCPKMT-203ENST00000484763 MAFO75444 373 aaPredicted RBP22.61■■□□□ 1.21
VCPKMT-203ENST00000484763 KIF20AO95235 890 aa22.61■■□□□ 1.21
VCPKMT-203ENST00000484763 F2P00734 622 aa22.61■■□□□ 1.21
VCPKMT-203ENST00000484763 C6orf222P0C671 652 aaPredicted RBP22.61■■□□□ 1.21
VCPKMT-203ENST00000484763 PLS3P13797 630 aa22.61■■□□□ 1.21
VCPKMT-203ENST00000484763 BEX3Q00994 111 aa22.61■■□□□ 1.21
VCPKMT-203ENST00000484763 L1TD1Q5T7N2 865 aaKnown RBP22.61■■□□□ 1.21
VCPKMT-203ENST00000484763 FAM178BQ8IXR5 827 aa22.61■■□□□ 1.21
VCPKMT-203ENST00000484763 MYOCDQ8IZQ8 938 aa22.61■■□□□ 1.21
VCPKMT-203ENST00000484763 GLIS3Q8NEA6 775 aa22.61■■□□□ 1.21
VCPKMT-203ENST00000484763 ENOX1Q8TC92 643 aaKnown RBP22.61■■□□□ 1.21
VCPKMT-203ENST00000484763 NELFBQ8WX92 580 aa22.61■■□□□ 1.21
VCPKMT-203ENST00000484763 FGFBP2Q9BYJ0 223 aa22.61■■□□□ 1.21
VCPKMT-203ENST00000484763 RWDD2AQ9UIY3 292 aa22.61■■□□□ 1.21
VCPKMT-203ENST00000484763 IRX5P78411 483 aaPredicted RBP22.61■■□□□ 1.21
VCPKMT-203ENST00000484763 LRRC41Q15345 812 aa22.61■■□□□ 1.21
VCPKMT-203ENST00000484763 ZNF484Q5JVG2 852 aa22.61■■□□□ 1.21
VCPKMT-203ENST00000484763 C17orf75Q9HAS0 396 aa22.61■■□□□ 1.21
VCPKMT-203ENST00000484763 GAS2O43903 313 aaKnown RBP22.6■■□□□ 1.21
VCPKMT-203ENST00000484763 MYL3P08590 195 aa22.6■■□□□ 1.21
VCPKMT-203ENST00000484763 RTP1P59025 263 aa22.6■■□□□ 1.21
VCPKMT-203ENST00000484763 NKX3-2P78367 333 aa22.6■■□□□ 1.21
VCPKMT-203ENST00000484763 FIZ1Q96SL8 496 aa22.6■■□□□ 1.21
VCPKMT-203ENST00000484763 JPH2Q9BR39 696 aaPredicted RBP22.6■■□□□ 1.21
VCPKMT-203ENST00000484763 XPNPEP3Q9NQH7 507 aa22.6■■□□□ 1.21
VCPKMT-203ENST00000484763 KPNA6O60684 536 aa22.59■■□□□ 1.21
VCPKMT-203ENST00000484763 GCNT3O95395 438 aa22.59■■□□□ 1.21
VCPKMT-203ENST00000484763 MAPTP10636 758 aaKnown RBP22.59■■□□□ 1.21
VCPKMT-203ENST00000484763 INSRRP14616 1297 aa22.59■■□□□ 1.21
VCPKMT-203ENST00000484763 CASP5P51878 434 aa22.59■■□□□ 1.21
VCPKMT-203ENST00000484763 SOX10P56693 466 aa22.59■■□□□ 1.21
VCPKMT-203ENST00000484763 STX17P56962 302 aa22.59■■□□□ 1.21
VCPKMT-203ENST00000484763 NCAPHQ15003 741 aa22.59■■□□□ 1.21
VCPKMT-203ENST00000484763 EPM2AIP1Q7L775 607 aaPredicted RBP22.59■■□□□ 1.21
VCPKMT-203ENST00000484763 KAT2BQ92831 832 aa22.59■■□□□ 1.21
VCPKMT-203ENST00000484763 MED15Q96RN5 788 aa22.59■■□□□ 1.21
VCPKMT-203ENST00000484763 POLR3FQ9H1D9 316 aaPredicted RBP22.59■■□□□ 1.21
VCPKMT-203ENST00000484763 DDX20Q9UHI6 824 aaKnown RBP22.59■■□□□ 1.21
VCPKMT-203ENST00000484763 MYADML2A6NDP7 307 aa22.59■■□□□ 1.21
VCPKMT-203ENST00000484763 CCNE1P24864 410 aa22.59■■□□□ 1.21
VCPKMT-203ENST00000484763 TPM4P67936 248 aa22.59■■□□□ 1.21
VCPKMT-203ENST00000484763 DMP1Q13316 513 aaPredicted RBP22.59■■□□□ 1.21
VCPKMT-203ENST00000484763 STXBP4Q6ZWJ1 553 aa22.59■■□□□ 1.21
VCPKMT-203ENST00000484763 SLC17A8Q8NDX2 589 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms