RNA–Protein interactions for RNA: ENST00000484552.5

CAST-210, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 1,767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-210ENST00000484552 WDR43Q15061 677 aaKnown RBP eCLIP8.9□□□□□ -0.98
CAST-210ENST00000484552 CCDC40Q4G0X9 1142 aa8.9□□□□□ -0.98
CAST-210ENST00000484552 CEP78Q5JTW2 689 aa8.9□□□□□ -0.98
CAST-210ENST00000484552 IQUBQ8NA54 791 aa8.9□□□□□ -0.98
CAST-210ENST00000484552 PLBD2Q8NHP8 589 aa8.9□□□□□ -0.98
CAST-210ENST00000484552 FBF1Q8TES7 1133 aa8.9□□□□□ -0.98
CAST-210ENST00000484552 CCT6BQ92526 530 aa8.9□□□□□ -0.98
CAST-210ENST00000484552 LPIN2Q92539 896 aa8.9□□□□□ -0.98
CAST-210ENST00000484552 BAP1Q92560 729 aa8.9□□□□□ -0.98
CAST-210ENST00000484552 GPRASP2Q96D09 838 aa8.9□□□□□ -0.98
CAST-210ENST00000484552 SNF8Q96H20 258 aa8.9□□□□□ -0.98
CAST-210ENST00000484552 RBM41Q96IZ5 413 aaKnown RBP8.9□□□□□ -0.98
CAST-210ENST00000484552 CAAP1Q9H8G2 361 aa8.9□□□□□ -0.98
CAST-210ENST00000484552 GRPEL1Q9HAV7 217 aa8.9□□□□□ -0.98
CAST-210ENST00000484552 XAB2Q9HCS7 855 aaKnown RBP8.9□□□□□ -0.98
CAST-210ENST00000484552 MYO6Q9UM54 1294 aa8.9□□□□□ -0.98
CAST-210ENST00000484552 CLEC4AQ9UMR7 237 aa8.9□□□□□ -0.98
CAST-210ENST00000484552 SCAF8Q9UPN6 1271 aaKnown RBP8.9□□□□□ -0.98
CAST-210ENST00000484552 PLAAQ9Y263 795 aa8.9□□□□□ -0.98
CAST-210ENST00000484552 GPR52Q9Y2T5 361 aa8.9□□□□□ -0.98
CAST-210ENST00000484552 PCDHB3Q9Y5E6 796 aa8.9□□□□□ -0.98
CAST-210ENST00000484552 PCDHB12Q9Y5F1 795 aa8.9□□□□□ -0.98
CAST-210ENST00000484552 CPS1P31327 1500 aa8.89□□□□□ -0.99
CAST-210ENST00000484552 WASLO00401 505 aaPredicted RBP8.89□□□□□ -0.99
CAST-210ENST00000484552 DPYSL4O14531 572 aa8.89□□□□□ -0.99
CAST-210ENST00000484552 RIPK2O43353 540 aa8.89□□□□□ -0.99
CAST-210ENST00000484552 CTNND1O60716 968 aaKnown RBP8.89□□□□□ -0.99
CAST-210ENST00000484552 HSPA4LO95757 839 aa8.89□□□□□ -0.99
CAST-210ENST00000484552 FESP07332 822 aa8.89□□□□□ -0.99
CAST-210ENST00000484552 ARF4P18085 180 aaPredicted RBP8.89□□□□□ -0.99
CAST-210ENST00000484552 ABCG1P45844 678 aa8.89□□□□□ -0.99
CAST-210ENST00000484552 MTIF2P46199 727 aaKnown RBP8.89□□□□□ -0.99
CAST-210ENST00000484552 IFNAR2P48551 515 aa8.89□□□□□ -0.99
CAST-210ENST00000484552 RPIAP49247 311 aa8.89□□□□□ -0.99
CAST-210ENST00000484552 VPS41P49754 854 aa8.89□□□□□ -0.99
CAST-210ENST00000484552 ARFIP1P53367 373 aa8.89□□□□□ -0.99
CAST-210ENST00000484552 AP3M2P53677 418 aa8.89□□□□□ -0.99
CAST-210ENST00000484552 CASP7P55210 303 aa8.89□□□□□ -0.99
CAST-210ENST00000484552 GNA13Q14344 377 aa8.89□□□□□ -0.99
CAST-210ENST00000484552 TCEA2Q15560 299 aa8.89□□□□□ -0.99
CAST-210ENST00000484552 ZRSR1Q15695 479 aaKnown RBP8.89□□□□□ -0.99
CAST-210ENST00000484552 USH1GQ495M9 461 aa8.89□□□□□ -0.99
CAST-210ENST00000484552 MMEL1Q495T6 779 aa8.89□□□□□ -0.99
CAST-210ENST00000484552 FUT11Q495W5 492 aa8.89□□□□□ -0.99
CAST-210ENST00000484552 ZBTB41Q5SVQ8 909 aa8.89□□□□□ -0.99
CAST-210ENST00000484552 NUP54Q7Z3B4 507 aa8.89□□□□□ -0.99
CAST-210ENST00000484552 LUZP1Q86V48 1076 aa8.89□□□□□ -0.99
CAST-210ENST00000484552 CAND1Q86VP6 1230 aaKnown RBP8.89□□□□□ -0.99
CAST-210ENST00000484552 ANKLE2Q86XL3 938 aa8.89□□□□□ -0.99
CAST-210ENST00000484552 SLC15A3Q8IY34 581 aa8.89□□□□□ -0.99
CAST-210ENST00000484552 CCDC170Q8IYT3 715 aa8.89□□□□□ -0.99
CAST-210ENST00000484552 TRMT2AQ8IZ69 625 aaKnown RBP8.89□□□□□ -0.99
CAST-210ENST00000484552 UBR7Q8N806 425 aa8.89□□□□□ -0.99
CAST-210ENST00000484552 C7orf57Q8NEG2 295 aa8.89□□□□□ -0.99
CAST-210ENST00000484552 CTCFLQ8NI51 663 aaPredicted RBP8.89□□□□□ -0.99
CAST-210ENST00000484552 NSUN6Q8TEA1 469 aaKnown RBP8.89□□□□□ -0.99
CAST-210ENST00000484552 SNX27Q96L92 541 aa8.89□□□□□ -0.99
CAST-210ENST00000484552 TTC25Q96NG3 672 aa8.89□□□□□ -0.99
CAST-210ENST00000484552 SLC26A6Q9BXS9 759 aa8.89□□□□□ -0.99
CAST-210ENST00000484552 FAM217BQ9NTX9 383 aaPredicted RBP8.89□□□□□ -0.99
CAST-210ENST00000484552 INTS10Q9NVR2 710 aaKnown RBP8.89□□□□□ -0.99
CAST-210ENST00000484552 ADGRE2Q9UHX3 823 aa8.89□□□□□ -0.99
CAST-210ENST00000484552 PCDHB2Q9Y5E7 798 aa8.89□□□□□ -0.99
CAST-210ENST00000484552 ATAD2Q6PL18 1390 aa8.89□□□□□ -0.99
CAST-210ENST00000484552 UNC13BO14795 1591 aa8.89□□□□□ -0.99
CAST-210ENST00000484552 NPHP4O75161 1426 aaPredicted RBP8.89□□□□□ -0.99
CAST-210ENST00000484552 VWA5AO00534 786 aa8.89□□□□□ -0.99
CAST-210ENST00000484552 FRS3O43559 492 aa8.89□□□□□ -0.99
CAST-210ENST00000484552 TLR5O60602 858 aa8.89□□□□□ -0.99
CAST-210ENST00000484552 SIN3BO75182 1162 aa8.89□□□□□ -0.99
CAST-210ENST00000484552 GOSR1O95249 250 aa8.89□□□□□ -0.99
CAST-210ENST00000484552 AKR1B1P15121 316 aa8.89□□□□□ -0.99
CAST-210ENST00000484552 GCLCP48506 637 aaPredicted RBP8.89□□□□□ -0.99
CAST-210ENST00000484552 MAPKAPK2P49137 400 aa8.89□□□□□ -0.99
CAST-210ENST00000484552 PMS1P54277 932 aaKnown RBP8.89□□□□□ -0.99
CAST-210ENST00000484552 OXCT1P55809 520 aa8.89□□□□□ -0.99
CAST-210ENST00000484552 NLRP6P59044 892 aa8.89□□□□□ -0.99
CAST-210ENST00000484552 COG7P83436 770 aa8.89□□□□□ -0.99
CAST-210ENST00000484552 CETN1Q12798 172 aa8.89□□□□□ -0.99
CAST-210ENST00000484552 TRIM32Q13049 653 aa8.89□□□□□ -0.99
CAST-210ENST00000484552 FRG1Q14331 258 aaKnown RBP8.89□□□□□ -0.99
CAST-210ENST00000484552 MAPRE2Q15555 327 aa8.89□□□□□ -0.99
CAST-210ENST00000484552 TMEM53Q6P2H8 277 aa8.89□□□□□ -0.99
CAST-210ENST00000484552 KLC3Q6P597 504 aa8.89□□□□□ -0.99
CAST-210ENST00000484552 FAM47EQ6ZV65 393 aa8.89□□□□□ -0.99
CAST-210ENST00000484552 HS2ST1Q7LGA3 356 aa8.89□□□□□ -0.99
CAST-210ENST00000484552 OR52K1Q8NGK4 314 aa8.89□□□□□ -0.99
CAST-210ENST00000484552 CABLES1Q8TDN4 633 aa8.89□□□□□ -0.99
CAST-210ENST00000484552 HS6ST2Q96MM7 605 aa8.89□□□□□ -0.99
CAST-210ENST00000484552 CGREF1Q99674 301 aa8.89□□□□□ -0.99
CAST-210ENST00000484552 OXCT2Q9BYC2 517 aaPredicted RBP8.89□□□□□ -0.99
CAST-210ENST00000484552 PRKD2Q9BZL6 878 aa8.89□□□□□ -0.99
CAST-210ENST00000484552 KIAA1683Q9H0B3 1180 aa8.89□□□□□ -0.99
CAST-210ENST00000484552 LIN28AQ9H9Z2 209 aaKnown RBP8.89□□□□□ -0.99
CAST-210ENST00000484552 KIF9Q9HAQ2 790 aa8.89□□□□□ -0.99
CAST-210ENST00000484552 USP40Q9NVE5 1235 aa8.89□□□□□ -0.99
CAST-210ENST00000484552 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.89□□□□□ -0.99
CAST-210ENST00000484552 HESX1Q9UBX0 185 aa8.89□□□□□ -0.99
CAST-210ENST00000484552 GJD2Q9UKL4 321 aa8.89□□□□□ -0.99
CAST-210ENST00000484552 L1RE1Q9UN81 338 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms