RNA–Protein interactions for RNA: ENST00000483448.1

SYPL1-206, Transcript of synaptophysin like 1, humanhuman

TSL 4

Gene SYPL1, Length 478 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-206ENST00000483448 SLC37A4O43826 429 aa24.23■■□□□ 1.47
SYPL1-206ENST00000483448 GPR32O75388 356 aa24.23■■□□□ 1.47
SYPL1-206ENST00000483448 LARGE1O95461 756 aa24.23■■□□□ 1.47
SYPL1-206ENST00000483448 RB1P06400 928 aa24.23■■□□□ 1.47
SYPL1-206ENST00000483448 BMP1P13497 986 aa24.23■■□□□ 1.47
SYPL1-206ENST00000483448 NLRP11P59045 1033 aaKnown RBP24.23■■□□□ 1.47
SYPL1-206ENST00000483448 PAN2Q504Q3 1202 aaKnown RBP24.23■■□□□ 1.47
SYPL1-206ENST00000483448 GTF3C6Q969F1 213 aa24.23■■□□□ 1.47
SYPL1-206ENST00000483448 SCLT1Q96NL6 688 aa24.23■■□□□ 1.47
SYPL1-206ENST00000483448 NAP1L4Q99733 375 aaKnown RBP24.23■■□□□ 1.47
SYPL1-206ENST00000483448 BRMS1Q9HCU9 246 aa24.23■■□□□ 1.47
SYPL1-206ENST00000483448 SEPT9Q9UHD8 586 aaPredicted RBP24.23■■□□□ 1.47
SYPL1-206ENST00000483448 EVPLQ92817 2033 aa24.23■■□□□ 1.47
SYPL1-206ENST00000483448 GCFC2P16383 781 aaKnown RBP24.22■■□□□ 1.47
SYPL1-206ENST00000483448 KRT2P35908 639 aa24.22■■□□□ 1.47
SYPL1-206ENST00000483448 SARSP49591 514 aaKnown RBP24.22■■□□□ 1.47
SYPL1-206ENST00000483448 MTERF2Q49AM1 385 aa24.22■■□□□ 1.47
SYPL1-206ENST00000483448 XKR3Q5GH77 459 aa24.22■■□□□ 1.47
SYPL1-206ENST00000483448 ZNF668Q96K58 619 aaPredicted RBP24.22■■□□□ 1.47
SYPL1-206ENST00000483448 C11orf84Q9BUA3 381 aaPredicted RBP24.22■■□□□ 1.47
SYPL1-206ENST00000483448 RNF216Q9NWF9 866 aaPredicted RBP24.22■■□□□ 1.47
SYPL1-206ENST00000483448 MGEA5O60502 916 aa24.21■■□□□ 1.47
SYPL1-206ENST00000483448 FDPSP14324 419 aaKnown RBP24.21■■□□□ 1.47
SYPL1-206ENST00000483448 FOSBP53539 338 aa24.21■■□□□ 1.47
SYPL1-206ENST00000483448 PPP4R3AQ6IN85 833 aa24.21■■□□□ 1.47
SYPL1-206ENST00000483448 FAM43BQ6ZT52 329 aaPredicted RBP24.21■■□□□ 1.47
SYPL1-206ENST00000483448 FAM228AQ86W67 206 aa24.21■■□□□ 1.47
SYPL1-206ENST00000483448 CMTR2Q8IYT2 770 aaKnown RBP24.21■■□□□ 1.47
SYPL1-206ENST00000483448 BANK1Q8NDB2 785 aa24.21■■□□□ 1.47
SYPL1-206ENST00000483448 FAM20AQ96MK3 541 aa24.21■■□□□ 1.47
SYPL1-206ENST00000483448 RC3H2Q9HBD1 1191 aaKnown RBP24.21■■□□□ 1.47
SYPL1-206ENST00000483448 RGS18Q9NS28 235 aa24.21■■□□□ 1.47
SYPL1-206ENST00000483448 C1orf112Q9NSG2 853 aa24.21■■□□□ 1.47
SYPL1-206ENST00000483448 TTC3P53804 2025 aa24.21■■□□□ 1.47
SYPL1-206ENST00000483448 LOXHD1Q8IVV2 1947 aa24.2■■□□□ 1.46
SYPL1-206ENST00000483448 TRIM29Q14134 588 aa24.2■■□□□ 1.46
SYPL1-206ENST00000483448 TIGD5Q53EQ6 642 aa24.2■■□□□ 1.46
SYPL1-206ENST00000483448 SLC24A5Q71RS6 500 aa24.2■■□□□ 1.46
SYPL1-206ENST00000483448 ZNF710Q8N1W2 664 aa24.2■■□□□ 1.46
SYPL1-206ENST00000483448 CLP1Q92989 425 aaKnown RBP24.2■■□□□ 1.46
SYPL1-206ENST00000483448 NIFKQ9BYG3 293 aaKnown RBP24.2■■□□□ 1.46
SYPL1-206ENST00000483448 MRPL42Q9Y6G3 142 aaKnown RBP24.2■■□□□ 1.46
SYPL1-206ENST00000483448 VCANP13611 3396 aa24.19■■□□□ 1.46
SYPL1-206ENST00000483448 TMEM150BA6NC51 233 aa24.19■■□□□ 1.46
SYPL1-206ENST00000483448 C5orf67F2Z3F1 127 aa24.19■■□□□ 1.46
SYPL1-206ENST00000483448 CSPG5O95196 566 aa24.19■■□□□ 1.46
SYPL1-206ENST00000483448 BAG4O95429 457 aaKnown RBP24.19■■□□□ 1.46
SYPL1-206ENST00000483448 GATMP50440 423 aa24.19■■□□□ 1.46
SYPL1-206ENST00000483448 DNM2P50570 870 aa24.19■■□□□ 1.46
SYPL1-206ENST00000483448 PSMC5P62195 406 aa24.19■■□□□ 1.46
SYPL1-206ENST00000483448 NR5A1Q13285 461 aa24.19■■□□□ 1.46
SYPL1-206ENST00000483448 SPOUT1Q5T280 376 aaKnown RBP24.19■■□□□ 1.46
SYPL1-206ENST00000483448 B3GNT9Q6UX72 402 aa24.19■■□□□ 1.46
SYPL1-206ENST00000483448 EP400NLQ6ZTU2 488 aa24.19■■□□□ 1.46
SYPL1-206ENST00000483448 CRIPAKQ8N1N5 446 aa24.19■■□□□ 1.46
SYPL1-206ENST00000483448 LINC01465Q8N7H1 131 aa24.19■■□□□ 1.46
SYPL1-206ENST00000483448 NSUN7Q8NE18 718 aaKnown RBP24.19■■□□□ 1.46
SYPL1-206ENST00000483448 NLRP7Q8WX94 980 aa24.19■■□□□ 1.46
SYPL1-206ENST00000483448 SH2D3AQ9BRG2 576 aa24.19■■□□□ 1.46
SYPL1-206ENST00000483448 ADAMTS10Q9H324 1103 aa24.19■■□□□ 1.46
SYPL1-206ENST00000483448 UBE2ZQ9H832 354 aaPredicted RBP24.19■■□□□ 1.46
SYPL1-206ENST00000483448 COL4A6Q14031 1691 aa24.18■■□□□ 1.46
SYPL1-206ENST00000483448 EML1O00423 815 aa24.18■■□□□ 1.46
SYPL1-206ENST00000483448 GRM6O15303 877 aa24.18■■□□□ 1.46
SYPL1-206ENST00000483448 ZSCAN20P17040 1043 aaPredicted RBP24.18■■□□□ 1.46
SYPL1-206ENST00000483448 TARBP2Q15633 366 aaKnown RBP24.18■■□□□ 1.46
SYPL1-206ENST00000483448 TCEAL5Q5H9L2 206 aa24.18■■□□□ 1.46
SYPL1-206ENST00000483448 NECAB3Q96P71 396 aaPredicted RBP24.18■■□□□ 1.46
SYPL1-206ENST00000483448 NSUN3Q9H649 340 aaKnown RBP24.18■■□□□ 1.46
SYPL1-206ENST00000483448 KCNMB3Q9NPA1 279 aa24.18■■□□□ 1.46
SYPL1-206ENST00000483448 TTC28Q96AY4 2481 aa24.18■■□□□ 1.46
SYPL1-206ENST00000483448 REV3LO60673 3130 aa24.17■■□□□ 1.46
SYPL1-206ENST00000483448 JAK2O60674 1132 aa24.17■■□□□ 1.46
SYPL1-206ENST00000483448 DKC1O60832 514 aaKnown RBP eCLIP24.17■■□□□ 1.46
SYPL1-206ENST00000483448 LINC00271P0C7V0 271 aa24.17■■□□□ 1.46
SYPL1-206ENST00000483448 EIF4BP23588 611 aaKnown RBP24.17■■□□□ 1.46
SYPL1-206ENST00000483448 GPC3P51654 580 aa24.17■■□□□ 1.46
SYPL1-206ENST00000483448 PPP2R5CQ13362 524 aa24.17■■□□□ 1.46
SYPL1-206ENST00000483448 EARS2Q5JPH6 523 aaKnown RBP24.17■■□□□ 1.46
SYPL1-206ENST00000483448 PLVAPQ9BX97 442 aa24.17■■□□□ 1.46
SYPL1-206ENST00000483448 LMAN2LQ9H0V9 348 aa24.17■■□□□ 1.46
SYPL1-206ENST00000483448 ATP6V0A4Q9HBG4 840 aa24.17■■□□□ 1.46
SYPL1-206ENST00000483448 ALG13Q9NP73 1137 aaKnown RBP24.17■■□□□ 1.46
SYPL1-206ENST00000483448 FAM205CA6NFA0 338 aa24.16■■□□□ 1.46
SYPL1-206ENST00000483448 TBKBP1A7MCY6 615 aa24.16■■□□□ 1.46
SYPL1-206ENST00000483448 C9IYK1 514 aa24.16■■□□□ 1.46
SYPL1-206ENST00000483448 TBX3O15119 743 aa24.16■■□□□ 1.46
SYPL1-206ENST00000483448 STBD1O95210 358 aa24.16■■□□□ 1.46
SYPL1-206ENST00000483448 KCNA5P22460 613 aa24.16■■□□□ 1.46
SYPL1-206ENST00000483448 QARSP47897 775 aaKnown RBP24.16■■□□□ 1.46
SYPL1-206ENST00000483448 NCAPH2Q6IBW4 605 aa24.16■■□□□ 1.46
SYPL1-206ENST00000483448 POTEDQ86YR6 584 aa24.16■■□□□ 1.46
SYPL1-206ENST00000483448 VAV3Q9UKW4 847 aa24.16■■□□□ 1.46
SYPL1-206ENST00000483448 LIMCH1Q9UPQ0 1083 aa24.16■■□□□ 1.46
SYPL1-206ENST00000483448 TCF20Q9UGU0 1960 aaKnown RBP24.16■■□□□ 1.46
SYPL1-206ENST00000483448 NLRC5Q86WI3 1866 aa24.15■■□□□ 1.46
SYPL1-206ENST00000483448 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP24.15■■□□□ 1.46
SYPL1-206ENST00000483448 P4HBP07237 508 aaKnown RBP24.15■■□□□ 1.46
SYPL1-206ENST00000483448 DARSP14868 501 aaKnown RBP24.15■■□□□ 1.46
SYPL1-206ENST00000483448 CDC42EP1Q00587 391 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms