RNA–Protein interactions for RNA: ENST00000483442.5

LRCH3-217, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-217ENST00000483442 KLHL6Q8WZ60 621 aa4.76□□□□□ -1.65
LRCH3-217ENST00000483442 ALG3Q92685 438 aa4.76□□□□□ -1.65
LRCH3-217ENST00000483442 MTA3Q9BTC8 594 aa4.76□□□□□ -1.65
LRCH3-217ENST00000483442 GULP1Q9UBP9 304 aa4.76□□□□□ -1.65
LRCH3-217ENST00000483442 DIS3Q9Y2L1 958 aaKnown RBP4.76□□□□□ -1.65
LRCH3-217ENST00000483442 SIT1Q9Y3P8 196 aa4.76□□□□□ -1.65
LRCH3-217ENST00000483442 USP16Q9Y5T5 823 aa4.76□□□□□ -1.65
LRCH3-217ENST00000483442 DLEC1Q9Y238 1755 aa4.76□□□□□ -1.65
LRCH3-217ENST00000483442 CACNA1SQ13698 1873 aa4.75□□□□□ -1.65
LRCH3-217ENST00000483442 A0A1W2PQH9 124 aa4.75□□□□□ -1.65
LRCH3-217ENST00000483442 KCNQ3O43525 872 aa4.75□□□□□ -1.65
LRCH3-217ENST00000483442 NOBOXO60393 691 aa4.75□□□□□ -1.65
LRCH3-217ENST00000483442 EPHX1P07099 455 aa4.75□□□□□ -1.65
LRCH3-217ENST00000483442 HMOX1P09601 288 aa4.75□□□□□ -1.65
LRCH3-217ENST00000483442 EN2P19622 333 aaPredicted RBP4.75□□□□□ -1.65
LRCH3-217ENST00000483442 PAK2Q13177 524 aa4.75□□□□□ -1.65
LRCH3-217ENST00000483442 TNIP1Q15025 636 aa4.75□□□□□ -1.65
LRCH3-217ENST00000483442 MTHFSDQ2M296 383 aaKnown RBP4.75□□□□□ -1.65
LRCH3-217ENST00000483442 GNPTABQ3T906 1256 aa4.75□□□□□ -1.65
LRCH3-217ENST00000483442 MBLAC2Q68D91 279 aa4.75□□□□□ -1.65
LRCH3-217ENST00000483442 KRTAP5-3Q6L8H2 238 aa4.75□□□□□ -1.65
LRCH3-217ENST00000483442 ZNF790Q6PG37 636 aa4.75□□□□□ -1.65
LRCH3-217ENST00000483442 FBXO46Q6PJ61 603 aaPredicted RBP4.75□□□□□ -1.65
LRCH3-217ENST00000483442 HHIPL2Q6UWX4 724 aa4.75□□□□□ -1.65
LRCH3-217ENST00000483442 B3GNT8Q7Z7M8 397 aa4.75□□□□□ -1.65
LRCH3-217ENST00000483442 ZNF513Q8N8E2 541 aaPredicted RBP4.75□□□□□ -1.65
LRCH3-217ENST00000483442 SMARCC2Q8TAQ2 1214 aa4.75□□□□□ -1.65
LRCH3-217ENST00000483442 DDX1Q92499 740 aaKnown RBP4.75□□□□□ -1.65
LRCH3-217ENST00000483442 RPGRQ92834 1020 aaKnown RBP4.75□□□□□ -1.65
LRCH3-217ENST00000483442 DCPSQ96C86 337 aaKnown RBP4.75□□□□□ -1.65
LRCH3-217ENST00000483442 RNF38Q9H0F5 515 aa4.75□□□□□ -1.65
LRCH3-217ENST00000483442 TMX4Q9H1E5 349 aaPredicted RBP4.75□□□□□ -1.65
LRCH3-217ENST00000483442 WHRNQ9P202 907 aa4.75□□□□□ -1.65
LRCH3-217ENST00000483442 DBR1Q9UK59 544 aaKnown RBP4.75□□□□□ -1.65
LRCH3-217ENST00000483442 NPC1L1Q9UHC9 1359 aa4.75□□□□□ -1.65
LRCH3-217ENST00000483442 ANKRD31Q8N7Z5 1873 aa4.75□□□□□ -1.65
LRCH3-217ENST00000483442 TJP1Q07157 1748 aa4.75□□□□□ -1.65
LRCH3-217ENST00000483442 PRAMEF22A3QJZ6 481 aa4.74□□□□□ -1.65
LRCH3-217ENST00000483442 ADM5C9JUS6 153 aa4.74□□□□□ -1.65
LRCH3-217ENST00000483442 INSRRP14616 1297 aa4.74□□□□□ -1.65
LRCH3-217ENST00000483442 IL13P35225 146 aa4.74□□□□□ -1.65
LRCH3-217ENST00000483442 TEFQ10587 303 aa4.74□□□□□ -1.65
LRCH3-217ENST00000483442 TCEAL1Q15170 157 aa4.74□□□□□ -1.65
LRCH3-217ENST00000483442 HLFQ16534 295 aa4.74□□□□□ -1.65
LRCH3-217ENST00000483442 SPATS1Q496A3 300 aa4.74□□□□□ -1.65
LRCH3-217ENST00000483442 TBC1D10BQ4KMP7 808 aaPredicted RBP4.74□□□□□ -1.65
LRCH3-217ENST00000483442 CARFQ8N187 725 aa4.74□□□□□ -1.65
LRCH3-217ENST00000483442 NGEFQ8N5V2 710 aa4.74□□□□□ -1.65
LRCH3-217ENST00000483442 LZTR1Q8N653 840 aa4.74□□□□□ -1.65
LRCH3-217ENST00000483442 TSPAN17Q96FV3 270 aa4.74□□□□□ -1.65
LRCH3-217ENST00000483442 RBM17Q96I25 401 aaKnown RBP4.74□□□□□ -1.65
LRCH3-217ENST00000483442 CGGBP1Q9UFW8 167 aaPredicted RBP4.74□□□□□ -1.65
LRCH3-217ENST00000483442 ZNF652Q9Y2D9 606 aa4.74□□□□□ -1.65
LRCH3-217ENST00000483442 EFR3BQ9Y2G0 817 aa4.74□□□□□ -1.65
LRCH3-217ENST00000483442 FAN1Q9Y2M0 1017 aa4.74□□□□□ -1.65
LRCH3-217ENST00000483442 THSD7BQ9C0I4 1608 aa4.74□□□□□ -1.65
LRCH3-217ENST00000483442 HEG1Q9ULI3 1381 aa4.74□□□□□ -1.65
LRCH3-217ENST00000483442 TRPM7Q96QT4 1865 aa4.73□□□□□ -1.65
LRCH3-217ENST00000483442 C7orf72A4D263 438 aa4.73□□□□□ -1.65
LRCH3-217ENST00000483442 C2orf71A6NGG8 1288 aa4.73□□□□□ -1.65
LRCH3-217ENST00000483442 UBE2Q2LH0YL09 131 aa4.73□□□□□ -1.65
LRCH3-217ENST00000483442 GIPRP48546 466 aa4.73□□□□□ -1.65
LRCH3-217ENST00000483442 SMAD4Q13485 552 aaKnown RBP4.73□□□□□ -1.65
LRCH3-217ENST00000483442 UBXN11Q5T124 520 aa4.73□□□□□ -1.65
LRCH3-217ENST00000483442 EEF1DP3Q658K8 133 aa4.73□□□□□ -1.65
LRCH3-217ENST00000483442 HEATR6Q6AI08 1181 aaKnown RBP4.73□□□□□ -1.65
LRCH3-217ENST00000483442 MORC1Q86VD1 984 aa4.73□□□□□ -1.65
LRCH3-217ENST00000483442 METTL16Q86W50 562 aaKnown RBP4.73□□□□□ -1.65
LRCH3-217ENST00000483442 ARHGEF39Q8N4T4 335 aa4.73□□□□□ -1.65
LRCH3-217ENST00000483442 IL17REQ8NFR9 667 aa4.73□□□□□ -1.65
LRCH3-217ENST00000483442 DPF3Q92784 378 aa4.73□□□□□ -1.65
LRCH3-217ENST00000483442 RNF34Q969K3 372 aa4.73□□□□□ -1.65
LRCH3-217ENST00000483442 DDX11Q96FC9 970 aa4.73□□□□□ -1.65
LRCH3-217ENST00000483442 CRAMP1Q96RY5 1269 aa4.73□□□□□ -1.65
LRCH3-217ENST00000483442 LGR4Q9BXB1 951 aa4.73□□□□□ -1.65
LRCH3-217ENST00000483442 VPS33BQ9H267 617 aa4.73□□□□□ -1.65
LRCH3-217ENST00000483442 R3HDMLQ9H3Y0 253 aa4.73□□□□□ -1.65
LRCH3-217ENST00000483442 METTL5Q9NRN9 209 aaKnown RBP4.73□□□□□ -1.65
LRCH3-217ENST00000483442 APEX2Q9UBZ4 518 aa4.73□□□□□ -1.65
LRCH3-217ENST00000483442 COL4A5P29400 1685 aa4.73□□□□□ -1.65
LRCH3-217ENST00000483442 COL11A2P13942 1736 aaPredicted RBP4.72□□□□□ -1.65
LRCH3-217ENST00000483442 YDJCA8MPS7 323 aa4.72□□□□□ -1.65
LRCH3-217ENST00000483442 H0YGN5 161 aa4.72□□□□□ -1.65
LRCH3-217ENST00000483442 RECKO95980 971 aa4.72□□□□□ -1.65
LRCH3-217ENST00000483442 NTRK1P04629 796 aa4.72□□□□□ -1.65
LRCH3-217ENST00000483442 C8BP07358 591 aa4.72□□□□□ -1.65
LRCH3-217ENST00000483442 CNR2P34972 360 aa4.72□□□□□ -1.65
LRCH3-217ENST00000483442 SOX9P48436 509 aa4.72□□□□□ -1.65
LRCH3-217ENST00000483442 CACNB2Q08289 660 aaPredicted RBP4.72□□□□□ -1.65
LRCH3-217ENST00000483442 CYP4F3Q08477 520 aa4.72□□□□□ -1.65
LRCH3-217ENST00000483442 ZXDCQ2QGD7 858 aaPredicted RBP4.72□□□□□ -1.65
LRCH3-217ENST00000483442 CRY2Q49AN0 593 aa4.72□□□□□ -1.65
LRCH3-217ENST00000483442 DPP8Q6V1X1 898 aaPredicted RBP4.72□□□□□ -1.65
LRCH3-217ENST00000483442 MOB2Q70IA6 237 aa4.72□□□□□ -1.65
LRCH3-217ENST00000483442 ADAT2Q7Z6V5 191 aaKnown RBP4.72□□□□□ -1.65
LRCH3-217ENST00000483442 ZNF761Q86XN6 746 aaPredicted RBP4.72□□□□□ -1.65
LRCH3-217ENST00000483442 RASAL3Q86YV0 1011 aa4.72□□□□□ -1.65
LRCH3-217ENST00000483442 SUPT20HQ8NEM7 779 aa4.72□□□□□ -1.65
LRCH3-217ENST00000483442 RBM15Q96T37 977 aaKnown RBP eCLIP4.72□□□□□ -1.65
LRCH3-217ENST00000483442 LNPKQ9C0E8 428 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms