RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 SLC26A2P50443 739 aa8.41□□□□□ -1.06
CSDE1-206ENST00000483030 CRYBB1P53674 252 aaPredicted RBP8.41□□□□□ -1.06
CSDE1-206ENST00000483030 KCNC3Q14003 757 aa8.41□□□□□ -1.06
CSDE1-206ENST00000483030 PTPN21Q16825 1174 aa8.41□□□□□ -1.06
CSDE1-206ENST00000483030 KIZQ2M2Z5 673 aa8.41□□□□□ -1.06
CSDE1-206ENST00000483030 ZNF484Q5JVG2 852 aa8.41□□□□□ -1.06
CSDE1-206ENST00000483030 ODR4Q5SWX8 454 aa8.41□□□□□ -1.06
CSDE1-206ENST00000483030 FAM160B1Q5W0V3 765 aa8.41□□□□□ -1.06
CSDE1-206ENST00000483030 WWC2Q6AWC2 1192 aa8.41□□□□□ -1.06
CSDE1-206ENST00000483030 TYW1BQ6NUM6 668 aa8.41□□□□□ -1.06
CSDE1-206ENST00000483030 SWSAP1Q6NVH7 229 aa8.41□□□□□ -1.06
CSDE1-206ENST00000483030 LLGL2Q6P1M3 1020 aa8.41□□□□□ -1.06
CSDE1-206ENST00000483030 PDXDC2PQ6P474 469 aa8.41□□□□□ -1.06
CSDE1-206ENST00000483030 POTEGQ6S5H5 508 aa8.41□□□□□ -1.06
CSDE1-206ENST00000483030 ABHD15Q6UXT9 468 aa8.41□□□□□ -1.06
CSDE1-206ENST00000483030 TMEM184AQ6ZMB5 413 aa8.41□□□□□ -1.06
CSDE1-206ENST00000483030 FAM43BQ6ZT52 329 aaPredicted RBP8.41□□□□□ -1.06
CSDE1-206ENST00000483030 TRMT1LQ7Z2T5 733 aaKnown RBP8.41□□□□□ -1.06
CSDE1-206ENST00000483030 ZBTB33Q86T24 672 aa8.41□□□□□ -1.06
CSDE1-206ENST00000483030 MRPS27Q92552 414 aaKnown RBP8.41□□□□□ -1.06
CSDE1-206ENST00000483030 OSMRQ99650 979 aa8.41□□□□□ -1.06
CSDE1-206ENST00000483030 CWH43Q9H720 699 aa8.41□□□□□ -1.06
CSDE1-206ENST00000483030 RIC8AQ9NPQ8 531 aa8.41□□□□□ -1.06
CSDE1-206ENST00000483030 TMEM161AQ9NX61 479 aa8.41□□□□□ -1.06
CSDE1-206ENST00000483030 PUF60Q9UHX1 559 aaKnown RBP8.41□□□□□ -1.06
CSDE1-206ENST00000483030 C5orf42Q9H799 3197 aa8.4□□□□□ -1.06
CSDE1-206ENST00000483030 NLRC5Q86WI3 1866 aa8.4□□□□□ -1.06
CSDE1-206ENST00000483030 SMCO2A6NFE2 343 aa8.4□□□□□ -1.06
CSDE1-206ENST00000483030 ZBTB42B2RXF5 422 aa8.4□□□□□ -1.06
CSDE1-206ENST00000483030 H0Y858 1186 aa8.4□□□□□ -1.06
CSDE1-206ENST00000483030 VTNP04004 478 aa8.4□□□□□ -1.06
CSDE1-206ENST00000483030 SRGAP2BP0DMP2 458 aa8.4□□□□□ -1.06
CSDE1-206ENST00000483030 HOXB8P17481 243 aaPredicted RBP8.4□□□□□ -1.06
CSDE1-206ENST00000483030 ATP4AP20648 1035 aa8.4□□□□□ -1.06
CSDE1-206ENST00000483030 PBX3P40426 434 aa8.4□□□□□ -1.06
CSDE1-206ENST00000483030 CLCN6P51797 869 aa8.4□□□□□ -1.06
CSDE1-206ENST00000483030 ADCY7P51828 1080 aa8.4□□□□□ -1.06
CSDE1-206ENST00000483030 NAPAP54920 295 aa8.4□□□□□ -1.06
CSDE1-206ENST00000483030 PLCB3Q01970 1234 aa8.4□□□□□ -1.06
CSDE1-206ENST00000483030 DSC3Q14574 896 aa8.4□□□□□ -1.06
CSDE1-206ENST00000483030 MIS18BP1Q6P0N0 1132 aa8.4□□□□□ -1.06
CSDE1-206ENST00000483030 KCNT2Q6UVM3 1135 aa8.4□□□□□ -1.06
CSDE1-206ENST00000483030 SYNE3Q6ZMZ3 975 aa8.4□□□□□ -1.06
CSDE1-206ENST00000483030 LRRC55Q6ZSA7 311 aa8.4□□□□□ -1.06
CSDE1-206ENST00000483030 TMC7Q7Z402 723 aa8.4□□□□□ -1.06
CSDE1-206ENST00000483030 FAM228AQ86W67 206 aa8.4□□□□□ -1.06
CSDE1-206ENST00000483030 MICU3Q86XE3 530 aa8.4□□□□□ -1.06
CSDE1-206ENST00000483030 CCDC60Q8IWA6 550 aaPredicted RBP8.4□□□□□ -1.06
CSDE1-206ENST00000483030 CKAP2LQ8IYA6 745 aa8.4□□□□□ -1.06
CSDE1-206ENST00000483030 METTL13Q8N6R0 699 aa8.4□□□□□ -1.06
CSDE1-206ENST00000483030 KREMEN2Q8NCW0 462 aa8.4□□□□□ -1.06
CSDE1-206ENST00000483030 RASGRP4Q8TDF6 673 aa8.4□□□□□ -1.06
CSDE1-206ENST00000483030 RIPOR3Q96MK2 946 aa8.4□□□□□ -1.06
CSDE1-206ENST00000483030 CASD1Q96PB1 797 aa8.4□□□□□ -1.06
CSDE1-206ENST00000483030 TCF25Q9BQ70 676 aa8.4□□□□□ -1.06
CSDE1-206ENST00000483030 ANO3Q9BYT9 981 aa8.4□□□□□ -1.06
CSDE1-206ENST00000483030 TMEM117Q9H0C3 514 aa8.4□□□□□ -1.06
CSDE1-206ENST00000483030 IRF2BPLQ9H1B7 796 aa8.4□□□□□ -1.06
CSDE1-206ENST00000483030 ELAC1Q9H777 363 aaKnown RBP8.4□□□□□ -1.06
CSDE1-206ENST00000483030 NGRNQ9NPE2 291 aaKnown RBP8.4□□□□□ -1.06
CSDE1-206ENST00000483030 ENTPD7Q9NQZ7 604 aa8.4□□□□□ -1.06
CSDE1-206ENST00000483030 ZNF302Q9NR11 478 aa8.4□□□□□ -1.06
CSDE1-206ENST00000483030 CDH22Q9UJ99 828 aa8.4□□□□□ -1.06
CSDE1-206ENST00000483030 LZTS1Q9Y250 596 aa8.4□□□□□ -1.06
CSDE1-206ENST00000483030 V9GY48 417 aaPredicted RBP8.4□□□□□ -1.06
CSDE1-206ENST00000483030 DOCK5Q9H7D0 1870 aa8.4□□□□□ -1.07
CSDE1-206ENST00000483030 TRIOO75962 3097 aa8.39□□□□□ -1.07
CSDE1-206ENST00000483030 COL1A2P08123 1366 aa8.39□□□□□ -1.07
CSDE1-206ENST00000483030 ZDBF2Q9HCK1 2354 aa8.39□□□□□ -1.07
CSDE1-206ENST00000483030 FAM86B1E9PN63 330 aa8.39□□□□□ -1.07
CSDE1-206ENST00000483030 IPO5O00410 1097 aaKnown RBP8.39□□□□□ -1.07
CSDE1-206ENST00000483030 SLC27A2O14975 620 aa8.39□□□□□ -1.07
CSDE1-206ENST00000483030 DHX15O43143 795 aaKnown RBP8.39□□□□□ -1.07
CSDE1-206ENST00000483030 GPR32O75388 356 aa8.39□□□□□ -1.07
CSDE1-206ENST00000483030 C22orf31O95567 290 aa8.39□□□□□ -1.07
CSDE1-206ENST00000483030 FAM86B2P0C5J1 330 aa8.39□□□□□ -1.07
CSDE1-206ENST00000483030 SREBF1P36956 1147 aa8.39□□□□□ -1.07
CSDE1-206ENST00000483030 KRT17Q04695 432 aa8.39□□□□□ -1.07
CSDE1-206ENST00000483030 NIPA1Q7RTP0 329 aa8.39□□□□□ -1.07
CSDE1-206ENST00000483030 SGMS1Q86VZ5 419 aa8.39□□□□□ -1.07
CSDE1-206ENST00000483030 PLA2G4DQ86XP0 818 aa8.39□□□□□ -1.07
CSDE1-206ENST00000483030 RNF169Q8NCN4 708 aa8.39□□□□□ -1.07
CSDE1-206ENST00000483030 ZNF558Q96NG5 402 aa8.39□□□□□ -1.07
CSDE1-206ENST00000483030 LSG1Q9H089 658 aaKnown RBP8.39□□□□□ -1.07
CSDE1-206ENST00000483030 RNF19AQ9NV58 838 aa8.39□□□□□ -1.07
CSDE1-206ENST00000483030 SPG21Q9NZD8 308 aa8.39□□□□□ -1.07
CSDE1-206ENST00000483030 ZFHX2Q9C0A1 2572 aaPredicted RBP8.38□□□□□ -1.07
CSDE1-206ENST00000483030 CNTNAP5Q8WYK1 1306 aa8.38□□□□□ -1.07
CSDE1-206ENST00000483030 HOXA2O43364 376 aa8.38□□□□□ -1.07
CSDE1-206ENST00000483030 ZSCAN20P17040 1043 aaPredicted RBP8.38□□□□□ -1.07
CSDE1-206ENST00000483030 PPM1AP35813 382 aa8.38□□□□□ -1.07
CSDE1-206ENST00000483030 CLCN3P51790 818 aa8.38□□□□□ -1.07
CSDE1-206ENST00000483030 NLRP11P59045 1033 aaKnown RBP8.38□□□□□ -1.07
CSDE1-206ENST00000483030 FUT2Q10981 343 aa8.38□□□□□ -1.07
CSDE1-206ENST00000483030 AP3B2Q13367 1082 aa8.38□□□□□ -1.07
CSDE1-206ENST00000483030 GSE1Q14687 1217 aa8.38□□□□□ -1.07
CSDE1-206ENST00000483030 NECTIN1Q15223 517 aa8.38□□□□□ -1.07
CSDE1-206ENST00000483030 JAKMIP3Q5VZ66 844 aa8.38□□□□□ -1.07
CSDE1-206ENST00000483030 CREB3L3Q68CJ9 461 aa8.38□□□□□ -1.07
CSDE1-206ENST00000483030 CES5AQ6NT32 575 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms