RNA–Protein interactions for RNA: ENST00000482910.1

COL16A1-213, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 676 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-213ENST00000482910 COL4A6Q14031 1691 aa16.93■□□□□ 0.3
COL16A1-213ENST00000482910 GAS2O43903 313 aaKnown RBP16.92■□□□□ 0.3
COL16A1-213ENST00000482910 MAFO75444 373 aaPredicted RBP16.92■□□□□ 0.3
COL16A1-213ENST00000482910 SLITRK3O94933 977 aa16.92■□□□□ 0.3
COL16A1-213ENST00000482910 CA3P07451 260 aa16.92■□□□□ 0.3
COL16A1-213ENST00000482910 MYOGP15173 224 aa16.92■□□□□ 0.3
COL16A1-213ENST00000482910 CD52P31358 61 aa16.92■□□□□ 0.3
COL16A1-213ENST00000482910 YWHABP31946 246 aaKnown RBP16.92■□□□□ 0.3
COL16A1-213ENST00000482910 TOB1P50616 345 aaPredicted RBP16.92■□□□□ 0.3
COL16A1-213ENST00000482910 HTRA4P83105 476 aaPredicted RBP16.92■□□□□ 0.3
COL16A1-213ENST00000482910 PAK2Q13177 524 aa16.92■□□□□ 0.3
COL16A1-213ENST00000482910 GRIN2CQ14957 1233 aa16.92■□□□□ 0.3
COL16A1-213ENST00000482910 RILPL1Q5EBL4 403 aa16.92■□□□□ 0.3
COL16A1-213ENST00000482910 MYOCDQ8IZQ8 938 aa16.92■□□□□ 0.3
COL16A1-213ENST00000482910 LRRC71Q8N4P6 559 aa16.92■□□□□ 0.3
COL16A1-213ENST00000482910 INTS4Q96HW7 963 aaKnown RBP16.92■□□□□ 0.3
COL16A1-213ENST00000482910 ZBED2Q9BTP6 218 aa16.92■□□□□ 0.3
COL16A1-213ENST00000482910 ERVK-5Q9HDB9 667 aa16.92■□□□□ 0.3
COL16A1-213ENST00000482910 AKT3Q9Y243 479 aa16.92■□□□□ 0.3
COL16A1-213ENST00000482910 INSL6Q9Y581 213 aa16.92■□□□□ 0.3
COL16A1-213ENST00000482910 ARID2Q68CP9 1835 aa16.91■□□□□ 0.3
COL16A1-213ENST00000482910 TMEM150BA6NC51 233 aa16.91■□□□□ 0.3
COL16A1-213ENST00000482910 LAD1O00515 517 aa16.91■□□□□ 0.3
COL16A1-213ENST00000482910 ENPP3O14638 875 aa16.91■□□□□ 0.3
COL16A1-213ENST00000482910 GPR182O15218 404 aa16.91■□□□□ 0.3
COL16A1-213ENST00000482910 RPS6KA5O75582 802 aa16.91■□□□□ 0.3
COL16A1-213ENST00000482910 VTNP04004 478 aa16.91■□□□□ 0.3
COL16A1-213ENST00000482910 PDCP20941 246 aa16.91■□□□□ 0.3
COL16A1-213ENST00000482910 RFC5P40937 340 aa16.91■□□□□ 0.3
COL16A1-213ENST00000482910 DNM2P50570 870 aa16.91■□□□□ 0.3
COL16A1-213ENST00000482910 GPC3P51654 580 aa16.91■□□□□ 0.3
COL16A1-213ENST00000482910 NLRP11P59045 1033 aaKnown RBP16.91■□□□□ 0.3
COL16A1-213ENST00000482910 CYP4A11Q02928 519 aa16.91■□□□□ 0.3
COL16A1-213ENST00000482910 KIZQ2M2Z5 673 aa16.91■□□□□ 0.3
COL16A1-213ENST00000482910 LARP1BQ659C4 914 aaKnown RBP16.91■□□□□ 0.3
COL16A1-213ENST00000482910 MCTP1Q6DN14 999 aa16.91■□□□□ 0.3
COL16A1-213ENST00000482910 C4orf32Q8N8J7 132 aa16.91■□□□□ 0.3
COL16A1-213ENST00000482910 TMEM40Q8WWA1 233 aa16.91■□□□□ 0.3
COL16A1-213ENST00000482910 SNX21Q969T3 373 aa16.91■□□□□ 0.3
COL16A1-213ENST00000482910 TSPYL2Q9H2G4 693 aaPredicted RBP16.91■□□□□ 0.3
COL16A1-213ENST00000482910 ADAMTS10Q9H324 1103 aa16.91■□□□□ 0.3
COL16A1-213ENST00000482910 DHX33Q9H6R0 707 aaKnown RBP16.91■□□□□ 0.3
COL16A1-213ENST00000482910 SUGCTQ9HAC7 445 aa16.91■□□□□ 0.3
COL16A1-213ENST00000482910 CDHR5Q9HBB8 845 aa16.91■□□□□ 0.3
COL16A1-213ENST00000482910 TUFT1Q9NNX1 390 aa16.91■□□□□ 0.3
COL16A1-213ENST00000482910 ANKEF1Q9NU02 776 aa16.91■□□□□ 0.3
COL16A1-213ENST00000482910 CHD9Q3L8U1 2897 aa16.9■□□□□ 0.3
COL16A1-213ENST00000482910 POTEMA6NI47 508 aa16.9■□□□□ 0.3
COL16A1-213ENST00000482910 K7ELQ4 463 aaPredicted RBP16.9■□□□□ 0.3
COL16A1-213ENST00000482910 XRCC6P12956 609 aaKnown RBP eCLIP16.9■□□□□ 0.3
COL16A1-213ENST00000482910 MUTP22033 750 aa16.9■□□□□ 0.3
COL16A1-213ENST00000482910 EIF4BP23588 611 aaKnown RBP16.9■□□□□ 0.3
COL16A1-213ENST00000482910 FXR2P51116 673 aaKnown RBP eCLIP16.9■□□□□ 0.3
COL16A1-213ENST00000482910 TAP1Q03518 808 aa16.9■□□□□ 0.3
COL16A1-213ENST00000482910 CTTNQ14247 550 aaKnown RBP16.9■□□□□ 0.3
COL16A1-213ENST00000482910 TMEM266Q2M3C6 531 aa16.9■□□□□ 0.3
COL16A1-213ENST00000482910 PLA2G4FQ68DD2 849 aa16.9■□□□□ 0.3
COL16A1-213ENST00000482910 TPH2Q8IWU9 490 aa16.9■□□□□ 0.3
COL16A1-213ENST00000482910 SP7Q8TDD2 431 aaPredicted RBP16.9■□□□□ 0.3
COL16A1-213ENST00000482910 SLC7A3Q8WY07 619 aa16.9■□□□□ 0.3
COL16A1-213ENST00000482910 CEP170P1Q96L14 293 aa16.9■□□□□ 0.3
COL16A1-213ENST00000482910 OSMRQ99650 979 aa16.9■□□□□ 0.3
COL16A1-213ENST00000482910 POLR3CQ9BUI4 534 aaPredicted RBP16.9■□□□□ 0.3
COL16A1-213ENST00000482910 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.9■□□□□ 0.3
COL16A1-213ENST00000482910 GINS2Q9Y248 185 aa16.9■□□□□ 0.3
COL16A1-213ENST00000482910 NOC2LQ9Y3T9 749 aaKnown RBP16.9■□□□□ 0.3
COL16A1-213ENST00000482910 PRPHP41219 470 aa16.89■□□□□ 0.29
COL16A1-213ENST00000482910 TECP42680 631 aa16.89■□□□□ 0.29
COL16A1-213ENST00000482910 NPEPPSP55786 919 aa16.89■□□□□ 0.29
COL16A1-213ENST00000482910 PDIA5Q14554 519 aa16.89■□□□□ 0.29
COL16A1-213ENST00000482910 TMCO2Q7Z6W1 182 aaPredicted RBP16.89■□□□□ 0.29
COL16A1-213ENST00000482910 ZNF410Q86VK4 478 aa16.89■□□□□ 0.29
COL16A1-213ENST00000482910 FAM228AQ86W67 206 aa16.89■□□□□ 0.29
COL16A1-213ENST00000482910 ERMNQ8TAM6 284 aa16.89■□□□□ 0.29
COL16A1-213ENST00000482910 LINC01599Q8WXQ3 324 aa16.89■□□□□ 0.29
COL16A1-213ENST00000482910 RNF216Q9NWF9 866 aaPredicted RBP16.89■□□□□ 0.29
COL16A1-213ENST00000482910 PCDHB6Q9Y5E3 794 aa16.89■□□□□ 0.29
COL16A1-213ENST00000482910 STK24Q9Y6E0 443 aa16.89■□□□□ 0.29
COL16A1-213ENST00000482910 SPATA31C1P0DKV0 1188 aa16.88■□□□□ 0.29
COL16A1-213ENST00000482910 DARSP14868 501 aaKnown RBP16.88■□□□□ 0.29
COL16A1-213ENST00000482910 RPA1P27694 616 aa16.88■□□□□ 0.29
COL16A1-213ENST00000482910 POLGP54098 1239 aaPredicted RBP16.88■□□□□ 0.29
COL16A1-213ENST00000482910 NFX1Q12986 1120 aaKnown RBP16.88■□□□□ 0.29
COL16A1-213ENST00000482910 PTGDRQ13258 359 aa16.88■□□□□ 0.29
COL16A1-213ENST00000482910 DRP2Q13474 957 aa16.88■□□□□ 0.29
COL16A1-213ENST00000482910 NBR1Q14596 966 aa16.88■□□□□ 0.29
COL16A1-213ENST00000482910 XKR9Q5GH70 373 aa16.88■□□□□ 0.29
COL16A1-213ENST00000482910 HAUS3Q68CZ6 603 aa16.88■□□□□ 0.29
COL16A1-213ENST00000482910 BRAPQ7Z569 592 aa16.88■□□□□ 0.29
COL16A1-213ENST00000482910 RTN4RL1Q86UN2 441 aaPredicted RBP16.88■□□□□ 0.29
COL16A1-213ENST00000482910 TCP11Q8WWU5 503 aa16.88■□□□□ 0.29
COL16A1-213ENST00000482910 MYLIPQ8WY64 445 aa16.88■□□□□ 0.29
COL16A1-213ENST00000482910 GAS2L1Q99501 681 aaPredicted RBP16.88■□□□□ 0.29
COL16A1-213ENST00000482910 SH2D3AQ9BRG2 576 aa16.88■□□□□ 0.29
COL16A1-213ENST00000482910 RAB34Q9BZG1 259 aa16.88■□□□□ 0.29
COL16A1-213ENST00000482910 TMX1Q9H3N1 280 aa16.88■□□□□ 0.29
COL16A1-213ENST00000482910 C1orf112Q9NSG2 853 aa16.88■□□□□ 0.29
COL16A1-213ENST00000482910 SUCLA2Q9P2R7 463 aaPredicted RBP16.88■□□□□ 0.29
COL16A1-213ENST00000482910 ST3GAL5Q9UNP4 418 aa16.88■□□□□ 0.29
COL16A1-213ENST00000482910 CDH23Q9H251 3354 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms