RNA–Protein interactions for RNA: ENST00000482855.5

RPGR-208, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,819 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-208ENST00000482855 CNGA2Q16280 664 aa11.96□□□□□ -0.49
RPGR-208ENST00000482855 PPP2R5EQ16537 467 aa11.96□□□□□ -0.49
RPGR-208ENST00000482855 DUPD1Q68J44 220 aa11.96□□□□□ -0.49
RPGR-208ENST00000482855 KRT25Q7Z3Z0 450 aa11.96□□□□□ -0.49
RPGR-208ENST00000482855 SLFN11Q7Z7L1 901 aa11.96□□□□□ -0.49
RPGR-208ENST00000482855 DNAAF5Q86Y56 855 aa11.96□□□□□ -0.49
RPGR-208ENST00000482855 PLCD4Q9BRC7 762 aa11.96□□□□□ -0.49
RPGR-208ENST00000482855 KANSL2Q9H9L4 492 aa11.96□□□□□ -0.49
RPGR-208ENST00000482855 ARHGEF10LQ9HCE6 1279 aa11.96□□□□□ -0.49
RPGR-208ENST00000482855 BARHL2Q9NY43 387 aa11.96□□□□□ -0.49
RPGR-208ENST00000482855 EIF4E1BA6NMX2 242 aaKnown RBP11.96□□□□□ -0.49
RPGR-208ENST00000482855 MPHOSPH10O00566 681 aaKnown RBP11.96□□□□□ -0.49
RPGR-208ENST00000482855 WFS1O76024 890 aa11.96□□□□□ -0.49
RPGR-208ENST00000482855 GBP1P32455 592 aa11.96□□□□□ -0.49
RPGR-208ENST00000482855 GNAQP50148 359 aa11.96□□□□□ -0.49
RPGR-208ENST00000482855 RPS6KA3P51812 740 aa11.96□□□□□ -0.49
RPGR-208ENST00000482855 PTENP60484 403 aa11.96□□□□□ -0.49
RPGR-208ENST00000482855 ZCWPW2Q504Y3 356 aa11.96□□□□□ -0.49
RPGR-208ENST00000482855 NT5DC3Q86UY8 548 aa11.96□□□□□ -0.49
RPGR-208ENST00000482855 MFN1Q8IWA4 741 aa11.96□□□□□ -0.49
RPGR-208ENST00000482855 TRIM59Q8IWR1 403 aa11.96□□□□□ -0.49
RPGR-208ENST00000482855 DNAJC10Q8IXB1 793 aa11.96□□□□□ -0.49
RPGR-208ENST00000482855 CEP63Q96MT8 703 aa11.96□□□□□ -0.49
RPGR-208ENST00000482855 TRIM7Q9C029 511 aa11.96□□□□□ -0.49
RPGR-208ENST00000482855 PAPOLBQ9NRJ5 636 aaKnown RBP11.96□□□□□ -0.49
RPGR-208ENST00000482855 FGFR1OP2Q9NVK5 253 aa11.96□□□□□ -0.49
RPGR-208ENST00000482855 LRRD1A4D1F6 860 aa11.96□□□□□ -0.5
RPGR-208ENST00000482855 TCP11X1B4DZS4 312 aa11.96□□□□□ -0.5
RPGR-208ENST00000482855 O00370 1275 aa11.96□□□□□ -0.5
RPGR-208ENST00000482855 IRF6O14896 467 aa11.96□□□□□ -0.5
RPGR-208ENST00000482855 SMIM24O75264 130 aa11.96□□□□□ -0.5
RPGR-208ENST00000482855 APBA3O96018 575 aa11.96□□□□□ -0.5
RPGR-208ENST00000482855 TXKP42681 527 aa11.96□□□□□ -0.5
RPGR-208ENST00000482855 EVX2Q03828 476 aa11.96□□□□□ -0.5
RPGR-208ENST00000482855 KLRC3Q07444 240 aa11.96□□□□□ -0.5
RPGR-208ENST00000482855 PRPF4BQ13523 1007 aaKnown RBP11.96□□□□□ -0.5
RPGR-208ENST00000482855 ASRGL1Q7L266 308 aa11.96□□□□□ -0.5
RPGR-208ENST00000482855 IRF2BP2Q7Z5L9 587 aa11.96□□□□□ -0.5
RPGR-208ENST00000482855 NEK8Q86SG6 692 aa11.96□□□□□ -0.5
RPGR-208ENST00000482855 PNMA1Q8ND90 353 aa11.96□□□□□ -0.5
RPGR-208ENST00000482855 FBF1Q8TES7 1133 aa11.96□□□□□ -0.5
RPGR-208ENST00000482855 DDX12PQ92771 950 aa11.96□□□□□ -0.5
RPGR-208ENST00000482855 HES6Q96HZ4 224 aa11.96□□□□□ -0.5
RPGR-208ENST00000482855 LRRC27Q9C0I9 530 aa11.96□□□□□ -0.5
RPGR-208ENST00000482855 CNOT7Q9UIV1 285 aaKnown RBP11.96□□□□□ -0.5
RPGR-208ENST00000482855 AMFRQ9UKV5 643 aa11.96□□□□□ -0.5
RPGR-208ENST00000482855 ARL2BPQ9Y2Y0 163 aa11.96□□□□□ -0.5
RPGR-208ENST00000482855 FAM187AA6NFU0 413 aa11.95□□□□□ -0.5
RPGR-208ENST00000482855 H2AFZP0C0S5 128 aa11.95□□□□□ -0.5
RPGR-208ENST00000482855 SLCO1A2P46721 670 aa11.95□□□□□ -0.5
RPGR-208ENST00000482855 SNX1Q13596 522 aa11.95□□□□□ -0.5
RPGR-208ENST00000482855 GNPTABQ3T906 1256 aa11.95□□□□□ -0.5
RPGR-208ENST00000482855 GRIPAP1Q4V328 841 aa11.95□□□□□ -0.5
RPGR-208ENST00000482855 CWF19L1Q69YN2 538 aaKnown RBP11.95□□□□□ -0.5
RPGR-208ENST00000482855 BTNL9Q6UXG8 535 aa11.95□□□□□ -0.5
RPGR-208ENST00000482855 H2AFVQ71UI9 128 aa11.95□□□□□ -0.5
RPGR-208ENST00000482855 LMNTD2Q8IXW0 634 aa11.95□□□□□ -0.5
RPGR-208ENST00000482855 EPS8L3Q8TE67 593 aaKnown RBP11.95□□□□□ -0.5
RPGR-208ENST00000482855 PNMA5Q96PV4 448 aa11.95□□□□□ -0.5
RPGR-208ENST00000482855 RAB3IPQ96QF0 476 aaPredicted RBP11.95□□□□□ -0.5
RPGR-208ENST00000482855 RXFP1Q9HBX9 757 aa11.95□□□□□ -0.5
RPGR-208ENST00000482855 BSDC1Q9NW68 430 aaPredicted RBP11.95□□□□□ -0.5
RPGR-208ENST00000482855 PNMA3Q9UL41 463 aa11.95□□□□□ -0.5
RPGR-208ENST00000482855 TTC7AQ9ULT0 858 aaPredicted RBP11.95□□□□□ -0.5
RPGR-208ENST00000482855 SNX24Q9Y343 169 aa11.95□□□□□ -0.5
RPGR-208ENST00000482855 CACNA1SQ13698 1873 aa11.95□□□□□ -0.5
RPGR-208ENST00000482855 DPPA5A6NC42 116 aa11.95□□□□□ -0.5
RPGR-208ENST00000482855 GNAT1P11488 350 aa11.95□□□□□ -0.5
RPGR-208ENST00000482855 MXRA7P84157 204 aa11.95□□□□□ -0.5
RPGR-208ENST00000482855 PDCD2Q16342 344 aaPredicted RBP11.95□□□□□ -0.5
RPGR-208ENST00000482855 CCDC38Q502W7 563 aa11.95□□□□□ -0.5
RPGR-208ENST00000482855 KIAA1755Q5JYT7 1200 aa11.95□□□□□ -0.5
RPGR-208ENST00000482855 NUGGCQ68CJ6 796 aa11.95□□□□□ -0.5
RPGR-208ENST00000482855 VPS36Q86VN1 386 aa11.95□□□□□ -0.5
RPGR-208ENST00000482855 UHMK1Q8TAS1 419 aaKnown RBP11.95□□□□□ -0.5
RPGR-208ENST00000482855 TBC1D16Q8TBP0 767 aa11.95□□□□□ -0.5
RPGR-208ENST00000482855 FBXO25Q8TCJ0 367 aa11.95□□□□□ -0.5
RPGR-208ENST00000482855 MGARPQ8TDB4 240 aa11.95□□□□□ -0.5
RPGR-208ENST00000482855 RAD54LQ92698 747 aa11.95□□□□□ -0.5
RPGR-208ENST00000482855 NAP1L3Q99457 506 aaPredicted RBP11.95□□□□□ -0.5
RPGR-208ENST00000482855 RASAL2Q9UJF2 1139 aa11.95□□□□□ -0.5
RPGR-208ENST00000482855 TRIM33Q9UPN9 1127 aa11.95□□□□□ -0.5
RPGR-208ENST00000482855 NR2E1Q9Y466 385 aa11.95□□□□□ -0.5
RPGR-208ENST00000482855 A0A0A6YYK5 440 aaPredicted RBP11.94□□□□□ -0.5
RPGR-208ENST00000482855 RASGRF2O14827 1237 aa11.94□□□□□ -0.5
RPGR-208ENST00000482855 GJB6O95452 261 aa11.94□□□□□ -0.5
RPGR-208ENST00000482855 STARD3NLO95772 234 aa11.94□□□□□ -0.5
RPGR-208ENST00000482855 PCK1P35558 622 aa11.94□□□□□ -0.5
RPGR-208ENST00000482855 MRPS35P82673 323 aaKnown RBP11.94□□□□□ -0.5
RPGR-208ENST00000482855 ROR2Q01974 943 aaKnown RBP11.94□□□□□ -0.5
RPGR-208ENST00000482855 DHX34Q14147 1143 aaKnown RBP11.94□□□□□ -0.5
RPGR-208ENST00000482855 GRM4Q14833 912 aa11.94□□□□□ -0.5
RPGR-208ENST00000482855 LRRC14Q15048 493 aa11.94□□□□□ -0.5
RPGR-208ENST00000482855 MAEAQ7L5Y9 396 aa11.94□□□□□ -0.5
RPGR-208ENST00000482855 SPATA21Q7Z572 469 aa11.94□□□□□ -0.5
RPGR-208ENST00000482855 FITM2Q8N6M3 262 aa11.94□□□□□ -0.5
RPGR-208ENST00000482855 KAT6BQ8WYB5 2073 aa11.94□□□□□ -0.5
RPGR-208ENST00000482855 LAMB1P07942 1786 aa11.94□□□□□ -0.5
RPGR-208ENST00000482855 RPTORQ8N122 1335 aa11.94□□□□□ -0.5
RPGR-208ENST00000482855 ABLIM1O14639 778 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms