RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 CD52P31358 61 aa20.56■□□□□ 0.88
SMIM4-204ENST00000482728 CRYBB1P53674 252 aaPredicted RBP20.56■□□□□ 0.88
SMIM4-204ENST00000482728 NPEPPSP55786 919 aa20.56■□□□□ 0.88
SMIM4-204ENST00000482728 NLRP11P59045 1033 aaKnown RBP20.56■□□□□ 0.88
SMIM4-204ENST00000482728 DEFB103AP81534 67 aa20.56■□□□□ 0.88
SMIM4-204ENST00000482728 CDC42EP1Q00587 391 aa20.56■□□□□ 0.88
SMIM4-204ENST00000482728 PAK2Q13177 524 aa20.56■□□□□ 0.88
SMIM4-204ENST00000482728 XKR9Q5GH70 373 aa20.56■□□□□ 0.88
SMIM4-204ENST00000482728 ODR4Q5SWX8 454 aa20.56■□□□□ 0.88
SMIM4-204ENST00000482728 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.56■□□□□ 0.88
SMIM4-204ENST00000482728 C4orf32Q8N8J7 132 aa20.56■□□□□ 0.88
SMIM4-204ENST00000482728 SLC7A3Q8WY07 619 aa20.56■□□□□ 0.88
SMIM4-204ENST00000482728 CCDC43Q96MW1 224 aaKnown RBP20.56■□□□□ 0.88
SMIM4-204ENST00000482728 SCLT1Q96NL6 688 aa20.56■□□□□ 0.88
SMIM4-204ENST00000482728 PPP1R16BQ96T49 567 aa20.56■□□□□ 0.88
SMIM4-204ENST00000482728 RAB34Q9BZG1 259 aa20.56■□□□□ 0.88
SMIM4-204ENST00000482728 AGO3Q9H9G7 860 aaKnown RBP20.56■□□□□ 0.88
SMIM4-204ENST00000482728 CDHR5Q9HBB8 845 aa20.56■□□□□ 0.88
SMIM4-204ENST00000482728 PPME1Q9Y570 386 aa20.56■□□□□ 0.88
SMIM4-204ENST00000482728 SZT2Q5T011 3432 aa20.55■□□□□ 0.88
SMIM4-204ENST00000482728 RBAK-RBAKDNI3L0D1 243 aa20.55■□□□□ 0.88
SMIM4-204ENST00000482728 TLL1O43897 1013 aa20.55■□□□□ 0.88
SMIM4-204ENST00000482728 RPS6KA5O75582 802 aa20.55■□□□□ 0.88
SMIM4-204ENST00000482728 POLGP54098 1239 aaPredicted RBP20.55■□□□□ 0.88
SMIM4-204ENST00000482728 NFX1Q12986 1120 aaKnown RBP20.55■□□□□ 0.88
SMIM4-204ENST00000482728 FAM117BQ6P1L5 589 aa20.55■□□□□ 0.88
SMIM4-204ENST00000482728 BRAPQ7Z569 592 aa20.55■□□□□ 0.88
SMIM4-204ENST00000482728 MYOCDQ8IZQ8 938 aa20.55■□□□□ 0.88
SMIM4-204ENST00000482728 LINC01465Q8N7H1 131 aa20.55■□□□□ 0.88
SMIM4-204ENST00000482728 NKX2-4Q9H2Z4 354 aa20.55■□□□□ 0.88
SMIM4-204ENST00000482728 ZNF576Q9H609 170 aa20.55■□□□□ 0.88
SMIM4-204ENST00000482728 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.55■□□□□ 0.88
SMIM4-204ENST00000482728 MTMR10Q9NXD2 777 aa20.55■□□□□ 0.88
SMIM4-204ENST00000482728 PADI3Q9ULW8 664 aa20.55■□□□□ 0.88
SMIM4-204ENST00000482728 ZBTB39O15060 712 aa20.54■□□□□ 0.88
SMIM4-204ENST00000482728 LYPLA2O95372 231 aa20.54■□□□□ 0.88
SMIM4-204ENST00000482728 SLC34A2O95436 690 aa20.54■□□□□ 0.88
SMIM4-204ENST00000482728 MYOGP15173 224 aa20.54■□□□□ 0.88
SMIM4-204ENST00000482728 SYT1P21579 422 aa20.54■□□□□ 0.88
SMIM4-204ENST00000482728 RFC5P40937 340 aa20.54■□□□□ 0.88
SMIM4-204ENST00000482728 FXR2P51116 673 aaKnown RBP eCLIP20.54■□□□□ 0.88
SMIM4-204ENST00000482728 PDIA5Q14554 519 aa20.54■□□□□ 0.88
SMIM4-204ENST00000482728 TMCO2Q7Z6W1 182 aaPredicted RBP20.54■□□□□ 0.88
SMIM4-204ENST00000482728 CEP89Q96ST8 783 aa20.54■□□□□ 0.88
SMIM4-204ENST00000482728 OSMRQ99650 979 aa20.54■□□□□ 0.88
SMIM4-204ENST00000482728 FTHL17Q9BXU8 183 aa20.54■□□□□ 0.88
SMIM4-204ENST00000482728 TTYH1Q9H313 450 aaPredicted RBP20.54■□□□□ 0.88
SMIM4-204ENST00000482728 TUFT1Q9NNX1 390 aa20.54■□□□□ 0.88
SMIM4-204ENST00000482728 ANKEF1Q9NU02 776 aa20.54■□□□□ 0.88
SMIM4-204ENST00000482728 SUCLA2Q9P2R7 463 aaPredicted RBP20.54■□□□□ 0.88
SMIM4-204ENST00000482728 LRWD1Q9UFC0 647 aa20.54■□□□□ 0.88
SMIM4-204ENST00000482728 YBX2Q9Y2T7 364 aaKnown RBP20.54■□□□□ 0.88
SMIM4-204ENST00000482728 NOC2LQ9Y3T9 749 aaKnown RBP20.54■□□□□ 0.88
SMIM4-204ENST00000482728 IGKV6-21A0A0C4DH24 114 aa20.53■□□□□ 0.88
SMIM4-204ENST00000482728 ENPP3O14638 875 aa20.53■□□□□ 0.88
SMIM4-204ENST00000482728 GPR182O15218 404 aa20.53■□□□□ 0.88
SMIM4-204ENST00000482728 GPR32O75388 356 aa20.53■□□□□ 0.88
SMIM4-204ENST00000482728 GJB5O95377 273 aa20.53■□□□□ 0.88
SMIM4-204ENST00000482728 XRCC6P12956 609 aaKnown RBP eCLIP20.53■□□□□ 0.88
SMIM4-204ENST00000482728 DTHD1Q6ZMT9 781 aa20.53■□□□□ 0.88
SMIM4-204ENST00000482728 FAM43BQ6ZT52 329 aaPredicted RBP20.53■□□□□ 0.88
SMIM4-204ENST00000482728 FERMT3Q86UX7 667 aa20.53■□□□□ 0.88
SMIM4-204ENST00000482728 CATSPER3Q86XQ3 398 aa20.53■□□□□ 0.88
SMIM4-204ENST00000482728 ZNF579Q8NAF0 562 aaKnown RBP20.53■□□□□ 0.88
SMIM4-204ENST00000482728 RAD9AQ99638 391 aa20.53■□□□□ 0.88
SMIM4-204ENST00000482728 POLR3CQ9BUI4 534 aaPredicted RBP20.53■□□□□ 0.88
SMIM4-204ENST00000482728 STK24Q9Y6E0 443 aa20.53■□□□□ 0.88
SMIM4-204ENST00000482728 UPP2O95045 317 aa20.52■□□□□ 0.88
SMIM4-204ENST00000482728 SPATA31C1P0DKV0 1188 aa20.52■□□□□ 0.88
SMIM4-204ENST00000482728 PRPHP41219 470 aa20.52■□□□□ 0.88
SMIM4-204ENST00000482728 MKRN4PQ13434 485 aaPredicted RBP20.52■□□□□ 0.88
SMIM4-204ENST00000482728 DRP2Q13474 957 aa20.52■□□□□ 0.88
SMIM4-204ENST00000482728 PPP2R2DQ66LE6 453 aa20.52■□□□□ 0.88
SMIM4-204ENST00000482728 PIGOQ8TEQ8 1089 aa20.52■□□□□ 0.88
SMIM4-204ENST00000482728 NLRP7Q8WX94 980 aa20.52■□□□□ 0.88
SMIM4-204ENST00000482728 ZNF668Q96K58 619 aaPredicted RBP20.52■□□□□ 0.88
SMIM4-204ENST00000482728 NACC1Q96RE7 527 aa20.52■□□□□ 0.88
SMIM4-204ENST00000482728 ADAMTS10Q9H324 1103 aa20.52■□□□□ 0.88
SMIM4-204ENST00000482728 ST3GAL5Q9UNP4 418 aa20.52■□□□□ 0.88
SMIM4-204ENST00000482728 LOXHD1Q8IVV2 1947 aa20.52■□□□□ 0.88
SMIM4-204ENST00000482728 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.51■□□□□ 0.87
SMIM4-204ENST00000482728 CA3P07451 260 aa20.51■□□□□ 0.87
SMIM4-204ENST00000482728 EIF4BP23588 611 aaKnown RBP20.51■□□□□ 0.87
SMIM4-204ENST00000482728 RPA1P27694 616 aa20.51■□□□□ 0.87
SMIM4-204ENST00000482728 CCT6AP40227 531 aaKnown RBP20.51■□□□□ 0.87
SMIM4-204ENST00000482728 GPC3P51654 580 aa20.51■□□□□ 0.87
SMIM4-204ENST00000482728 HAUS3Q68CZ6 603 aa20.51■□□□□ 0.87
SMIM4-204ENST00000482728 RHPN2Q8IUC4 686 aa20.51■□□□□ 0.87
SMIM4-204ENST00000482728 TMEM40Q8WWA1 233 aa20.51■□□□□ 0.87
SMIM4-204ENST00000482728 TCP11Q8WWU5 503 aa20.51■□□□□ 0.87
SMIM4-204ENST00000482728 TOP1MTQ969P6 601 aa20.51■□□□□ 0.87
SMIM4-204ENST00000482728 DHX33Q9H6R0 707 aaKnown RBP20.51■□□□□ 0.87
SMIM4-204ENST00000482728 INSL6Q9Y581 213 aa20.51■□□□□ 0.87
SMIM4-204ENST00000482728 MICAL3Q7RTP6 2002 aa20.51■□□□□ 0.87
SMIM4-204ENST00000482728 A0A087WWV3 80 aa20.5■□□□□ 0.87
SMIM4-204ENST00000482728 GAS2O43903 313 aaKnown RBP20.5■□□□□ 0.87
SMIM4-204ENST00000482728 MED24O75448 989 aa20.5■□□□□ 0.87
SMIM4-204ENST00000482728 TMEM143Q96AN5 459 aa20.5■□□□□ 0.87
SMIM4-204ENST00000482728 GCOM2Q9BZD3 368 aaPredicted RBP20.5■□□□□ 0.87
SMIM4-204ENST00000482728 ERVK-5Q9HDB9 667 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms