RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 CCT6AP40227 531 aaKnown RBP23.35■■□□□ 1.33
SEC13-217ENST00000482647 POLGP54098 1239 aaPredicted RBP23.35■■□□□ 1.33
SEC13-217ENST00000482647 CDC42EP1Q00587 391 aa23.35■■□□□ 1.33
SEC13-217ENST00000482647 LPIN1Q14693 890 aa23.35■■□□□ 1.33
SEC13-217ENST00000482647 FBXO47Q5MNV8 452 aa23.35■■□□□ 1.33
SEC13-217ENST00000482647 FAM173BQ6P4H8 233 aa23.35■■□□□ 1.33
SEC13-217ENST00000482647 ZNF579Q8NAF0 562 aaKnown RBP23.35■■□□□ 1.33
SEC13-217ENST00000482647 DBF4BQ8NFT6 615 aa23.35■■□□□ 1.33
SEC13-217ENST00000482647 GINS2Q9Y248 185 aa23.35■■□□□ 1.33
SEC13-217ENST00000482647 CLIC4Q9Y696 253 aa23.35■■□□□ 1.33
SEC13-217ENST00000482647 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.34■■□□□ 1.33
SEC13-217ENST00000482647 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.34■■□□□ 1.33
SEC13-217ENST00000482647 EFCAB14O75071 495 aa23.34■■□□□ 1.33
SEC13-217ENST00000482647 VTNP04004 478 aa23.34■■□□□ 1.33
SEC13-217ENST00000482647 TSHZ1Q6ZSZ6 1077 aa23.34■■□□□ 1.33
SEC13-217ENST00000482647 SNX29Q8TEQ0 813 aa23.34■■□□□ 1.33
SEC13-217ENST00000482647 PIGOQ8TEQ8 1089 aa23.34■■□□□ 1.33
SEC13-217ENST00000482647 APBB2Q92870 758 aa23.34■■□□□ 1.33
SEC13-217ENST00000482647 IFIH1Q9BYX4 1025 aaKnown RBP23.34■■□□□ 1.33
SEC13-217ENST00000482647 CRYBB1P53674 252 aaPredicted RBP23.33■■□□□ 1.33
SEC13-217ENST00000482647 MKRN4PQ13434 485 aaPredicted RBP23.33■■□□□ 1.33
SEC13-217ENST00000482647 KIZQ2M2Z5 673 aa23.33■■□□□ 1.33
SEC13-217ENST00000482647 POTEGQ6S5H5 508 aa23.33■■□□□ 1.33
SEC13-217ENST00000482647 OSBPL7Q9BZF2 842 aa23.33■■□□□ 1.33
SEC13-217ENST00000482647 DHX33Q9H6R0 707 aaKnown RBP23.33■■□□□ 1.33
SEC13-217ENST00000482647 SUCLA2Q9P2R7 463 aaPredicted RBP23.33■■□□□ 1.33
SEC13-217ENST00000482647 DBR1Q9UK59 544 aaKnown RBP23.33■■□□□ 1.33
SEC13-217ENST00000482647 A0A087WWV3 80 aa23.32■■□□□ 1.32
SEC13-217ENST00000482647 GAS2O43903 313 aaKnown RBP23.32■■□□□ 1.32
SEC13-217ENST00000482647 GPR32O75388 356 aa23.32■■□□□ 1.32
SEC13-217ENST00000482647 KCNJ6P48051 423 aa23.32■■□□□ 1.32
SEC13-217ENST00000482647 RARRES1P49788 294 aa23.32■■□□□ 1.32
SEC13-217ENST00000482647 NLRP11P59045 1033 aaKnown RBP23.32■■□□□ 1.32
SEC13-217ENST00000482647 CEBPZQ03701 1054 aaKnown RBP23.32■■□□□ 1.32
SEC13-217ENST00000482647 FOXD4L5Q5VV16 416 aaPredicted RBP23.32■■□□□ 1.32
SEC13-217ENST00000482647 FOXD4L4Q8WXT5 416 aaPredicted RBP23.32■■□□□ 1.32
SEC13-217ENST00000482647 AK8Q96MA6 479 aa23.32■■□□□ 1.32
SEC13-217ENST00000482647 ZNF396Q96N95 335 aaPredicted RBP23.32■■□□□ 1.32
SEC13-217ENST00000482647 KIAA1024Q9UPX6 916 aa23.32■■□□□ 1.32
SEC13-217ENST00000482647 TANC1Q9C0D5 1861 aa23.32■■□□□ 1.32
SEC13-217ENST00000482647 PP2D1A8MPX8 630 aa23.31■■□□□ 1.32
SEC13-217ENST00000482647 DGAT1O75907 488 aa23.31■■□□□ 1.32
SEC13-217ENST00000482647 FXR1P51114 621 aaKnown RBP eCLIP23.31■■□□□ 1.32
SEC13-217ENST00000482647 SMAD3P84022 425 aaKnown RBP23.31■■□□□ 1.32
SEC13-217ENST00000482647 DRP2Q13474 957 aa23.31■■□□□ 1.32
SEC13-217ENST00000482647 EMC2Q15006 297 aa23.31■■□□□ 1.32
SEC13-217ENST00000482647 PTPAQ15257 358 aa23.31■■□□□ 1.32
SEC13-217ENST00000482647 TCTN1Q2MV58 587 aa23.31■■□□□ 1.32
SEC13-217ENST00000482647 PHOSPHO2Q8TCD6 241 aa23.31■■□□□ 1.32
SEC13-217ENST00000482647 TCP11Q8WWU5 503 aa23.31■■□□□ 1.32
SEC13-217ENST00000482647 PPP1R16BQ96T49 567 aa23.31■■□□□ 1.32
SEC13-217ENST00000482647 ADAMTS10Q9H324 1103 aa23.31■■□□□ 1.32
SEC13-217ENST00000482647 AGO3Q9H9G7 860 aaKnown RBP23.31■■□□□ 1.32
SEC13-217ENST00000482647 CDHR5Q9HBB8 845 aa23.31■■□□□ 1.32
SEC13-217ENST00000482647 SCN5AQ14524 2016 aa23.3■■□□□ 1.32
SEC13-217ENST00000482647 SOX1O00570 391 aaPredicted RBP23.3■■□□□ 1.32
SEC13-217ENST00000482647 F13A1P00488 732 aa23.3■■□□□ 1.32
SEC13-217ENST00000482647 ATP2A2P16615 1042 aaKnown RBP23.3■■□□□ 1.32
SEC13-217ENST00000482647 CDC25AP30304 524 aa23.3■■□□□ 1.32
SEC13-217ENST00000482647 LONP1P36776 959 aaKnown RBP23.3■■□□□ 1.32
SEC13-217ENST00000482647 WDR5P61964 334 aaKnown RBP23.3■■□□□ 1.32
SEC13-217ENST00000482647 PAK2Q13177 524 aa23.3■■□□□ 1.32
SEC13-217ENST00000482647 PKP1Q13835 747 aa23.3■■□□□ 1.32
SEC13-217ENST00000482647 ODR4Q5SWX8 454 aa23.3■■□□□ 1.32
SEC13-217ENST00000482647 FAM43BQ6ZT52 329 aaPredicted RBP23.3■■□□□ 1.32
SEC13-217ENST00000482647 NLRP7Q8WX94 980 aa23.3■■□□□ 1.32
SEC13-217ENST00000482647 SCLT1Q96NL6 688 aa23.3■■□□□ 1.32
SEC13-217ENST00000482647 USP28Q96RU2 1077 aa23.3■■□□□ 1.32
SEC13-217ENST00000482647 SLC9A7Q96T83 725 aa23.3■■□□□ 1.32
SEC13-217ENST00000482647 OSMRQ99650 979 aa23.3■■□□□ 1.32
SEC13-217ENST00000482647 MTRQ99707 1265 aa23.3■■□□□ 1.32
SEC13-217ENST00000482647 DDX19AQ9NUU7 478 aaKnown RBP23.3■■□□□ 1.32
SEC13-217ENST00000482647 DNM3Q9UQ16 869 aa23.3■■□□□ 1.32
SEC13-217ENST00000482647 RPS6KA5O75582 802 aa23.29■■□□□ 1.32
SEC13-217ENST00000482647 CD52P31358 61 aa23.29■■□□□ 1.32
SEC13-217ENST00000482647 GPC3P51654 580 aa23.29■■□□□ 1.32
SEC13-217ENST00000482647 ECM1Q16610 540 aa23.29■■□□□ 1.32
SEC13-217ENST00000482647 RHPN2Q8IUC4 686 aa23.29■■□□□ 1.32
SEC13-217ENST00000482647 PSPC1Q8WXF1 523 aaKnown RBP23.29■■□□□ 1.32
SEC13-217ENST00000482647 TMEM143Q96AN5 459 aa23.29■■□□□ 1.32
SEC13-217ENST00000482647 MMTAG2Q9BU76 263 aaKnown RBP23.29■■□□□ 1.32
SEC13-217ENST00000482647 ATP6V0A4Q9HBG4 840 aa23.29■■□□□ 1.32
SEC13-217ENST00000482647 BMP2KQ9NSY1 1161 aaPredicted RBP23.29■■□□□ 1.32
SEC13-217ENST00000482647 PADI3Q9ULW8 664 aa23.29■■□□□ 1.32
SEC13-217ENST00000482647 WDR81Q562E7 1941 aa23.29■■□□□ 1.32
SEC13-217ENST00000482647 ARHGEF35A5YM69 484 aa23.28■■□□□ 1.32
SEC13-217ENST00000482647 GPR182O15218 404 aa23.28■■□□□ 1.32
SEC13-217ENST00000482647 SLC26A4O43511 780 aa23.28■■□□□ 1.32
SEC13-217ENST00000482647 EIF4BP23588 611 aaKnown RBP23.28■■□□□ 1.32
SEC13-217ENST00000482647 MARCKSP29966 332 aaPredicted RBP23.28■■□□□ 1.32
SEC13-217ENST00000482647 UBA7P41226 1012 aa23.28■■□□□ 1.32
SEC13-217ENST00000482647 SLC39A14Q15043 492 aa23.28■■□□□ 1.32
SEC13-217ENST00000482647 ZRSR1Q15695 479 aaKnown RBP23.28■■□□□ 1.32
SEC13-217ENST00000482647 FAM109BQ6ICB4 259 aaPredicted RBP23.28■■□□□ 1.32
SEC13-217ENST00000482647 KCTD17Q8N5Z5 321 aa23.28■■□□□ 1.32
SEC13-217ENST00000482647 TMEM40Q8WWA1 233 aa23.28■■□□□ 1.32
SEC13-217ENST00000482647 PRPF31Q8WWY3 499 aaKnown RBP23.28■■□□□ 1.32
SEC13-217ENST00000482647 FTHL17Q9BXU8 183 aa23.28■■□□□ 1.32
SEC13-217ENST00000482647 NOC2LQ9Y3T9 749 aaKnown RBP23.28■■□□□ 1.32
SEC13-217ENST00000482647 MORC2Q9Y6X9 1032 aaPredicted RBP23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms