RNA–Protein interactions for RNA: ENST00000482519.1

VAMP4-204, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 3

Gene VAMP4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-204ENST00000482519 EYSQ5T1H1 3165 aa18.58■□□□□ 0.57
VAMP4-204ENST00000482519 LINC01553A4QN01 128 aa18.58■□□□□ 0.56
VAMP4-204ENST00000482519 P4HBP07237 508 aaKnown RBP18.58■□□□□ 0.56
VAMP4-204ENST00000482519 TXKP42681 527 aa18.58■□□□□ 0.56
VAMP4-204ENST00000482519 CRYBB1P53674 252 aaPredicted RBP18.58■□□□□ 0.56
VAMP4-204ENST00000482519 NLRP11P59045 1033 aaKnown RBP18.58■□□□□ 0.56
VAMP4-204ENST00000482519 PLA2G4FQ68DD2 849 aa18.58■□□□□ 0.56
VAMP4-204ENST00000482519 TMEM40Q8WWA1 233 aa18.58■□□□□ 0.56
VAMP4-204ENST00000482519 FTHL17Q9BXU8 183 aa18.58■□□□□ 0.56
VAMP4-204ENST00000482519 FOXP1Q9H334 677 aaPredicted RBP18.58■□□□□ 0.56
VAMP4-204ENST00000482519 RGL1Q9NZL6 768 aa18.58■□□□□ 0.56
VAMP4-204ENST00000482519 NOC2LQ9Y3T9 749 aaKnown RBP18.58■□□□□ 0.56
VAMP4-204ENST00000482519 DKC1O60832 514 aaKnown RBP eCLIP18.57■□□□□ 0.56
VAMP4-204ENST00000482519 GPR32O75388 356 aa18.57■□□□□ 0.56
VAMP4-204ENST00000482519 STBD1O95210 358 aa18.57■□□□□ 0.56
VAMP4-204ENST00000482519 HTRA4P83105 476 aaPredicted RBP18.57■□□□□ 0.56
VAMP4-204ENST00000482519 CYP4A11Q02928 519 aa18.57■□□□□ 0.56
VAMP4-204ENST00000482519 CTTNQ14247 550 aaKnown RBP18.57■□□□□ 0.56
VAMP4-204ENST00000482519 EPHA7Q15375 998 aa18.57■□□□□ 0.56
VAMP4-204ENST00000482519 TARBP2Q15633 366 aaKnown RBP18.57■□□□□ 0.56
VAMP4-204ENST00000482519 ANO5Q75V66 913 aa18.57■□□□□ 0.56
VAMP4-204ENST00000482519 TPH2Q8IWU9 490 aa18.57■□□□□ 0.56
VAMP4-204ENST00000482519 DYDC2Q96IM9 177 aa18.57■□□□□ 0.56
VAMP4-204ENST00000482519 TGS1Q96RS0 853 aaKnown RBP18.57■□□□□ 0.56
VAMP4-204ENST00000482519 LXNQ9BS40 222 aa18.57■□□□□ 0.56
VAMP4-204ENST00000482519 TMX1Q9H3N1 280 aa18.57■□□□□ 0.56
VAMP4-204ENST00000482519 TTC12Q9H892 705 aaPredicted RBP18.57■□□□□ 0.56
VAMP4-204ENST00000482519 ST3GAL5Q9UNP4 418 aa18.57■□□□□ 0.56
VAMP4-204ENST00000482519 DNM2P50570 870 aa18.56■□□□□ 0.56
VAMP4-204ENST00000482519 ZNF174Q15697 407 aa18.56■□□□□ 0.56
VAMP4-204ENST00000482519 RTN4RL1Q86UN2 441 aaPredicted RBP18.56■□□□□ 0.56
VAMP4-204ENST00000482519 NOSTRINQ8IVI9 506 aa18.56■□□□□ 0.56
VAMP4-204ENST00000482519 LINC01599Q8WXQ3 324 aa18.56■□□□□ 0.56
VAMP4-204ENST00000482519 WRAP73Q9P2S5 460 aaPredicted RBP18.56■□□□□ 0.56
VAMP4-204ENST00000482519 DENND3A2RUS2 1198 aa18.55■□□□□ 0.56
VAMP4-204ENST00000482519 GPR182O15218 404 aa18.55■□□□□ 0.56
VAMP4-204ENST00000482519 GTPBP6O43824 516 aaPredicted RBP18.55■□□□□ 0.56
VAMP4-204ENST00000482519 MCM2P49736 904 aa18.55■□□□□ 0.56
VAMP4-204ENST00000482519 NPEPPSP55786 919 aa18.55■□□□□ 0.56
VAMP4-204ENST00000482519 SPIRE1Q08AE8 756 aa18.55■□□□□ 0.56
VAMP4-204ENST00000482519 DRP2Q13474 957 aa18.55■□□□□ 0.56
VAMP4-204ENST00000482519 ODR4Q5SWX8 454 aa18.55■□□□□ 0.56
VAMP4-204ENST00000482519 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.55■□□□□ 0.56
VAMP4-204ENST00000482519 LINC01465Q8N7H1 131 aa18.55■□□□□ 0.56
VAMP4-204ENST00000482519 IL27Q8NEV9 243 aa18.55■□□□□ 0.56
VAMP4-204ENST00000482519 GDPD5Q8WTR4 605 aa18.55■□□□□ 0.56
VAMP4-204ENST00000482519 NLRP7Q8WX94 980 aa18.55■□□□□ 0.56
VAMP4-204ENST00000482519 CEP170P1Q96L14 293 aa18.55■□□□□ 0.56
VAMP4-204ENST00000482519 MTMR9Q96QG7 549 aa18.55■□□□□ 0.56
VAMP4-204ENST00000482519 C17orf80Q9BSJ5 609 aa18.55■□□□□ 0.56
VAMP4-204ENST00000482519 TMEM60Q9H2L4 133 aa18.55■□□□□ 0.56
VAMP4-204ENST00000482519 ERVK-5Q9HDB9 667 aa18.55■□□□□ 0.56
VAMP4-204ENST00000482519 CYP26B1Q9NR63 512 aa18.55■□□□□ 0.56
VAMP4-204ENST00000482519 KIF3AQ9Y496 699 aa18.55■□□□□ 0.56
VAMP4-204ENST00000482519 GTF3C3Q9Y5Q9 886 aa18.55■□□□□ 0.56
VAMP4-204ENST00000482519 YWHABP31946 246 aaKnown RBP18.54■□□□□ 0.56
VAMP4-204ENST00000482519 ERVK-21P61565 698 aa18.54■□□□□ 0.56
VAMP4-204ENST00000482519 GRB10Q13322 594 aa18.54■□□□□ 0.56
VAMP4-204ENST00000482519 TTC38Q5R3I4 469 aa18.54■□□□□ 0.56
VAMP4-204ENST00000482519 MCTP1Q6DN14 999 aa18.54■□□□□ 0.56
VAMP4-204ENST00000482519 FAM228AQ86W67 206 aa18.54■□□□□ 0.56
VAMP4-204ENST00000482519 ZNF579Q8NAF0 562 aaKnown RBP18.54■□□□□ 0.56
VAMP4-204ENST00000482519 SP7Q8TDD2 431 aaPredicted RBP18.54■□□□□ 0.56
VAMP4-204ENST00000482519 ADAM2Q99965 735 aa18.54■□□□□ 0.56
VAMP4-204ENST00000482519 EIF2AK1Q9BQI3 630 aaKnown RBP18.54■□□□□ 0.56
VAMP4-204ENST00000482519 TSPYL2Q9H2G4 693 aaPredicted RBP18.54■□□□□ 0.56
VAMP4-204ENST00000482519 ADAMTS10Q9H324 1103 aa18.54■□□□□ 0.56
VAMP4-204ENST00000482519 ZSWIM4Q9H7M6 989 aa18.54■□□□□ 0.56
VAMP4-204ENST00000482519 BMP2KQ9NSY1 1161 aaPredicted RBP18.54■□□□□ 0.56
VAMP4-204ENST00000482519 SUCLA2Q9P2R7 463 aaPredicted RBP18.54■□□□□ 0.56
VAMP4-204ENST00000482519 LRFN2Q9ULH4 789 aa18.54■□□□□ 0.56
VAMP4-204ENST00000482519 NOL7Q9UMY1 257 aaKnown RBP18.54■□□□□ 0.56
VAMP4-204ENST00000482519 TRANK1O15050 2925 aa18.54■□□□□ 0.56
VAMP4-204ENST00000482519 ZBTB39O15060 712 aa18.53■□□□□ 0.56
VAMP4-204ENST00000482519 MGEA5O60502 916 aa18.53■□□□□ 0.56
VAMP4-204ENST00000482519 MAFO75444 373 aaPredicted RBP18.53■□□□□ 0.56
VAMP4-204ENST00000482519 SLITRK3O94933 977 aa18.53■□□□□ 0.56
VAMP4-204ENST00000482519 GJB2P29033 226 aa18.53■□□□□ 0.56
VAMP4-204ENST00000482519 GPC3P51654 580 aa18.53■□□□□ 0.56
VAMP4-204ENST00000482519 TTC3P53804 2025 aa18.53■□□□□ 0.56
VAMP4-204ENST00000482519 POLGP54098 1239 aaPredicted RBP18.53■□□□□ 0.56
VAMP4-204ENST00000482519 XKR9Q5GH70 373 aa18.53■□□□□ 0.56
VAMP4-204ENST00000482519 OTUD6AQ7L8S5 288 aa18.53■□□□□ 0.56
VAMP4-204ENST00000482519 RHPN2Q8IUC4 686 aa18.53■□□□□ 0.56
VAMP4-204ENST00000482519 C4orf19Q8IY42 314 aa18.53■□□□□ 0.56
VAMP4-204ENST00000482519 FIBCD1Q8N539 461 aa18.53■□□□□ 0.56
VAMP4-204ENST00000482519 FBXO22Q8NEZ5 403 aa18.53■□□□□ 0.56
VAMP4-204ENST00000482519 SLC7A3Q8WY07 619 aa18.53■□□□□ 0.56
VAMP4-204ENST00000482519 CEP89Q96ST8 783 aa18.53■□□□□ 0.56
VAMP4-204ENST00000482519 BACH2Q9BYV9 841 aa18.53■□□□□ 0.56
VAMP4-204ENST00000482519 PRUNE2Q8WUY3 3088 aa18.52■□□□□ 0.56
VAMP4-204ENST00000482519 POTEMA6NI47 508 aa18.52■□□□□ 0.56
VAMP4-204ENST00000482519 H3BQV1 296 aa18.52■□□□□ 0.56
VAMP4-204ENST00000482519 CSDE1O75534 798 aaKnown RBP18.52■□□□□ 0.56
VAMP4-204ENST00000482519 STAG3L1P0CL83 205 aa18.52■□□□□ 0.56
VAMP4-204ENST00000482519 EIF4BP23588 611 aaKnown RBP18.52■□□□□ 0.56
VAMP4-204ENST00000482519 TECP42680 631 aa18.52■□□□□ 0.56
VAMP4-204ENST00000482519 BTG3Q14201 252 aaPredicted RBP18.52■□□□□ 0.56
VAMP4-204ENST00000482519 NBR1Q14596 966 aa18.52■□□□□ 0.56
VAMP4-204ENST00000482519 SKIV2LQ15477 1246 aaKnown RBP18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms