RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 FAM126BQ8IXS8 530 aa14.73□□□□□ -0.05
HDAC1-208ENST00000482310 GRAMD1CQ8IYS0 662 aa14.73□□□□□ -0.05
HDAC1-208ENST00000482310 C7orf61Q8IZ16 206 aa14.73□□□□□ -0.05
HDAC1-208ENST00000482310 SLC43A3Q8NBI5 491 aa14.73□□□□□ -0.05
HDAC1-208ENST00000482310 LARP4BQ92615 738 aaKnown RBP14.73□□□□□ -0.05
HDAC1-208ENST00000482310 WNT8BQ93098 351 aa14.73□□□□□ -0.05
HDAC1-208ENST00000482310 ZNF668Q96K58 619 aaPredicted RBP14.73□□□□□ -0.05
HDAC1-208ENST00000482310 RUSC1Q9BVN2 902 aa14.73□□□□□ -0.05
HDAC1-208ENST00000482310 SERTAD1Q9UHV2 236 aa14.73□□□□□ -0.05
HDAC1-208ENST00000482310 DBR1Q9UK59 544 aaKnown RBP14.73□□□□□ -0.05
HDAC1-208ENST00000482310 LTBP2Q14767 1821 aa14.73□□□□□ -0.05
HDAC1-208ENST00000482310 MROH7Q68CQ1 1323 aa14.72□□□□□ -0.05
HDAC1-208ENST00000482310 TRIOBPQ9H2D6 2365 aa14.72□□□□□ -0.05
HDAC1-208ENST00000482310 RRN3P2A6NIE6 340 aa14.72□□□□□ -0.05
HDAC1-208ENST00000482310 DCDC2CA8MYV0 355 aa14.72□□□□□ -0.05
HDAC1-208ENST00000482310 TLR3O15455 904 aaKnown RBP14.72□□□□□ -0.05
HDAC1-208ENST00000482310 KRT18P05783 430 aaKnown RBP14.72□□□□□ -0.05
HDAC1-208ENST00000482310 CTSHP09668 335 aa14.72□□□□□ -0.05
HDAC1-208ENST00000482310 CAPN2P17655 700 aa14.72□□□□□ -0.05
HDAC1-208ENST00000482310 AFMP43652 599 aa14.72□□□□□ -0.05
HDAC1-208ENST00000482310 CDK7P50613 346 aa14.72□□□□□ -0.05
HDAC1-208ENST00000482310 DRP2Q13474 957 aa14.72□□□□□ -0.05
HDAC1-208ENST00000482310 TARBP2Q15633 366 aaKnown RBP14.72□□□□□ -0.05
HDAC1-208ENST00000482310 NAALADL2Q58DX5 795 aa14.72□□□□□ -0.05
HDAC1-208ENST00000482310 FAM102BQ5T8I3 360 aa14.72□□□□□ -0.05
HDAC1-208ENST00000482310 EFCAB12Q6NXP0 572 aa14.72□□□□□ -0.05
HDAC1-208ENST00000482310 SESTD1Q86VW0 696 aa14.72□□□□□ -0.05
HDAC1-208ENST00000482310 DNAJB3Q8WWF6 145 aa14.72□□□□□ -0.05
HDAC1-208ENST00000482310 SLC7A3Q8WY07 619 aa14.72□□□□□ -0.05
HDAC1-208ENST00000482310 TMEM143Q96AN5 459 aa14.72□□□□□ -0.05
HDAC1-208ENST00000482310 MTRQ99707 1265 aa14.72□□□□□ -0.05
HDAC1-208ENST00000482310 ATP6V0A4Q9HBG4 840 aa14.72□□□□□ -0.05
HDAC1-208ENST00000482310 GPRC5CQ9NQ84 441 aa14.72□□□□□ -0.05
HDAC1-208ENST00000482310 STK17AQ9UEE5 414 aa14.72□□□□□ -0.05
HDAC1-208ENST00000482310 AKT3Q9Y243 479 aa14.72□□□□□ -0.05
HDAC1-208ENST00000482310 SLC26A4O43511 780 aa14.71□□□□□ -0.05
HDAC1-208ENST00000482310 VTNP04004 478 aa14.71□□□□□ -0.05
HDAC1-208ENST00000482310 CASP1P29466 404 aa14.71□□□□□ -0.05
HDAC1-208ENST00000482310 SLC12A3P55017 1021 aa14.71□□□□□ -0.05
HDAC1-208ENST00000482310 UBE2HP62256 183 aa14.71□□□□□ -0.05
HDAC1-208ENST00000482310 PTPN11Q06124 597 aaPredicted RBP14.71□□□□□ -0.05
HDAC1-208ENST00000482310 SNX17Q15036 470 aa14.71□□□□□ -0.05
HDAC1-208ENST00000482310 E2F4Q16254 413 aa14.71□□□□□ -0.05
HDAC1-208ENST00000482310 CLEC17AQ6ZS10 378 aa14.71□□□□□ -0.05
HDAC1-208ENST00000482310 SV2BQ7L1I2 683 aa14.71□□□□□ -0.05
HDAC1-208ENST00000482310 DYMQ7RTS9 669 aa14.71□□□□□ -0.05
HDAC1-208ENST00000482310 CEP57L1Q8IYX8 460 aa14.71□□□□□ -0.05
HDAC1-208ENST00000482310 IQUBQ8NA54 791 aa14.71□□□□□ -0.05
HDAC1-208ENST00000482310 RETREG2Q8NC44 543 aa14.71□□□□□ -0.05
HDAC1-208ENST00000482310 DPF3Q92784 378 aa14.71□□□□□ -0.05
HDAC1-208ENST00000482310 CEP89Q96ST8 783 aa14.71□□□□□ -0.05
HDAC1-208ENST00000482310 PPP1R12CQ9BZL4 782 aa14.71□□□□□ -0.05
HDAC1-208ENST00000482310 LMBRD1Q9NUN5 540 aa14.71□□□□□ -0.05
HDAC1-208ENST00000482310 HPSEQ9Y251 543 aa14.71□□□□□ -0.05
HDAC1-208ENST00000482310 MAFO75444 373 aaPredicted RBP14.7□□□□□ -0.06
HDAC1-208ENST00000482310 NR1I2O75469 434 aa14.7□□□□□ -0.06
HDAC1-208ENST00000482310 ZNF202O95125 648 aa14.7□□□□□ -0.06
HDAC1-208ENST00000482310 CLTBP09497 229 aa14.7□□□□□ -0.06
HDAC1-208ENST00000482310 HOXC8P31273 242 aa14.7□□□□□ -0.06
HDAC1-208ENST00000482310 THPOP40225 353 aa14.7□□□□□ -0.06
HDAC1-208ENST00000482310 RFC5P40937 340 aa14.7□□□□□ -0.06
HDAC1-208ENST00000482310 ADAM17P78536 824 aa14.7□□□□□ -0.06
HDAC1-208ENST00000482310 FAAP100Q0VG06 881 aa14.7□□□□□ -0.06
HDAC1-208ENST00000482310 LONRF3Q496Y0 759 aa14.7□□□□□ -0.06
HDAC1-208ENST00000482310 RINT1Q6NUQ1 792 aa14.7□□□□□ -0.06
HDAC1-208ENST00000482310 SH3RF1Q7Z6J0 888 aa14.7□□□□□ -0.06
HDAC1-208ENST00000482310 SYT2Q8N9I0 419 aaPredicted RBP14.7□□□□□ -0.06
HDAC1-208ENST00000482310 DHX38Q92620 1227 aaKnown RBP14.7□□□□□ -0.06
HDAC1-208ENST00000482310 SCLT1Q96NL6 688 aa14.7□□□□□ -0.06
HDAC1-208ENST00000482310 CTAGE1Q96RT6 745 aa14.7□□□□□ -0.06
HDAC1-208ENST00000482310 POLR3FQ9H1D9 316 aaPredicted RBP14.7□□□□□ -0.06
HDAC1-208ENST00000482310 ZHX3Q9H4I2 956 aa14.7□□□□□ -0.06
HDAC1-208ENST00000482310 XPNPEP1Q9NQW7 623 aa14.7□□□□□ -0.06
HDAC1-208ENST00000482310 TMEM39AQ9NV64 488 aa14.7□□□□□ -0.06
HDAC1-208ENST00000482310 GINS2Q9Y248 185 aa14.7□□□□□ -0.06
HDAC1-208ENST00000482310 RANBP2P49792 3224 aaKnown RBP14.7□□□□□ -0.06
HDAC1-208ENST00000482310 UMODL1Q5DID0 1318 aa14.69□□□□□ -0.06
HDAC1-208ENST00000482310 MBLAC1A4D2B0 266 aaPredicted RBP14.69□□□□□ -0.06
HDAC1-208ENST00000482310 RSPH10B2B2RC85 870 aa14.69□□□□□ -0.06
HDAC1-208ENST00000482310 MAGEB2O15479 319 aa14.69□□□□□ -0.06
HDAC1-208ENST00000482310 ACTN4O43707 911 aaKnown RBP14.69□□□□□ -0.06
HDAC1-208ENST00000482310 DGAT1O75907 488 aa14.69□□□□□ -0.06
HDAC1-208ENST00000482310 CD4P01730 458 aa14.69□□□□□ -0.06
HDAC1-208ENST00000482310 RSPH10BP0C881 870 aa14.69□□□□□ -0.06
HDAC1-208ENST00000482310 XRCC6P12956 609 aaKnown RBP eCLIP14.69□□□□□ -0.06
HDAC1-208ENST00000482310 CYP11B2P19099 503 aa14.69□□□□□ -0.06
HDAC1-208ENST00000482310 FAM160A1Q05DH4 1040 aa14.69□□□□□ -0.06
HDAC1-208ENST00000482310 ANKRD33Q7Z3H0 272 aa14.69□□□□□ -0.06
HDAC1-208ENST00000482310 SERINC5Q86VE9 423 aa14.69□□□□□ -0.06
HDAC1-208ENST00000482310 RHPN2Q8IUC4 686 aa14.69□□□□□ -0.06
HDAC1-208ENST00000482310 KSR1Q8IVT5 923 aa14.69□□□□□ -0.06
HDAC1-208ENST00000482310 CNNM3Q8NE01 707 aa14.69□□□□□ -0.06
HDAC1-208ENST00000482310 MAP7D2Q96T17 732 aa14.69□□□□□ -0.06
HDAC1-208ENST00000482310 HTATIP2Q9BUP3 242 aa14.69□□□□□ -0.06
HDAC1-208ENST00000482310 BLZF1Q9H2G9 400 aa14.69□□□□□ -0.06
HDAC1-208ENST00000482310 DHX33Q9H6R0 707 aaKnown RBP14.69□□□□□ -0.06
HDAC1-208ENST00000482310 PCDHA2Q9Y5H9 948 aa14.69□□□□□ -0.06
HDAC1-208ENST00000482310 TET1Q8NFU7 2136 aa14.69□□□□□ -0.06
HDAC1-208ENST00000482310 MYMKA6NI61 221 aa14.68□□□□□ -0.06
HDAC1-208ENST00000482310 SFI1A8K8P3 1242 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms