RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 LINC01553A4QN01 128 aa10.33□□□□□ -0.76
HLA-B-253ENST00000481849 MEIS2O14770 477 aa10.33□□□□□ -0.76
HLA-B-253ENST00000481849 LPXNO60711 386 aa10.33□□□□□ -0.76
HLA-B-253ENST00000481849 STAM2O75886 525 aa10.33□□□□□ -0.76
HLA-B-253ENST00000481849 AMHP03971 560 aa10.33□□□□□ -0.76
HLA-B-253ENST00000481849 MARK3P27448 753 aa10.33□□□□□ -0.76
HLA-B-253ENST00000481849 GNAQP50148 359 aa10.33□□□□□ -0.76
HLA-B-253ENST00000481849 ARHGAP4P98171 946 aa10.33□□□□□ -0.76
HLA-B-253ENST00000481849 PCNX4Q63HM2 1172 aa10.33□□□□□ -0.76
HLA-B-253ENST00000481849 NLRX1Q86UT6 975 aa10.33□□□□□ -0.76
HLA-B-253ENST00000481849 LZTS2Q9BRK4 669 aa10.33□□□□□ -0.76
HLA-B-253ENST00000481849 USP26Q9BXU7 913 aa10.33□□□□□ -0.76
HLA-B-253ENST00000481849 PSTPIP2Q9H939 334 aa10.33□□□□□ -0.76
HLA-B-253ENST00000481849 MAP4K5Q9Y4K4 846 aa10.33□□□□□ -0.76
HLA-B-253ENST00000481849 SLC12A7Q9Y666 1083 aa10.33□□□□□ -0.76
HLA-B-253ENST00000481849 USP9XQ93008 2570 aaPredicted RBP10.33□□□□□ -0.76
HLA-B-253ENST00000481849 SCN5AQ14524 2016 aa10.33□□□□□ -0.76
HLA-B-253ENST00000481849 EMSYQ7Z589 1322 aa10.33□□□□□ -0.76
HLA-B-253ENST00000481849 GVINP1Q7Z2Y8 2422 aa10.32□□□□□ -0.76
HLA-B-253ENST00000481849 PIK3CDO00329 1044 aa10.32□□□□□ -0.76
HLA-B-253ENST00000481849 ATP9AO75110 1047 aa10.32□□□□□ -0.76
HLA-B-253ENST00000481849 HEATR3Q7Z4Q2 680 aa10.32□□□□□ -0.76
HLA-B-253ENST00000481849 MICU3Q86XE3 530 aa10.32□□□□□ -0.76
HLA-B-253ENST00000481849 LINC00528Q8N1L1 170 aa10.32□□□□□ -0.76
HLA-B-253ENST00000481849 SEPT8Q92599 483 aa10.32□□□□□ -0.76
HLA-B-253ENST00000481849 TMEM87BQ96K49 555 aa10.32□□□□□ -0.76
HLA-B-253ENST00000481849 TCEANC2Q96MN5 208 aa10.32□□□□□ -0.76
HLA-B-253ENST00000481849 TGS1Q96RS0 853 aaKnown RBP10.32□□□□□ -0.76
HLA-B-253ENST00000481849 MAP3K14Q99558 947 aa10.32□□□□□ -0.76
HLA-B-253ENST00000481849 SUGCTQ9HAC7 445 aa10.32□□□□□ -0.76
HLA-B-253ENST00000481849 ZNF215Q9UL58 517 aaPredicted RBP10.32□□□□□ -0.76
HLA-B-253ENST00000481849 DMXL1Q9Y485 3027 aa10.31□□□□□ -0.76
HLA-B-253ENST00000481849 CHD7Q9P2D1 2997 aa10.31□□□□□ -0.76
HLA-B-253ENST00000481849 EFCAB14O75071 495 aa10.31□□□□□ -0.76
HLA-B-253ENST00000481849 CALM1P0DP23 149 aa10.31□□□□□ -0.76
HLA-B-253ENST00000481849 CALM2P0DP24 149 aa10.31□□□□□ -0.76
HLA-B-253ENST00000481849 CALM3P0DP25 149 aa10.31□□□□□ -0.76
HLA-B-253ENST00000481849 GNAT1P11488 350 aa10.31□□□□□ -0.76
HLA-B-253ENST00000481849 ITGB5P18084 799 aa10.31□□□□□ -0.76
HLA-B-253ENST00000481849 POU3F3P20264 500 aaPredicted RBP10.31□□□□□ -0.76
HLA-B-253ENST00000481849 SMARCA1P28370 1054 aa10.31□□□□□ -0.76
HLA-B-253ENST00000481849 HOXC8P31273 242 aa10.31□□□□□ -0.76
HLA-B-253ENST00000481849 TCF7P36402 384 aaPredicted RBP10.31□□□□□ -0.76
HLA-B-253ENST00000481849 AAK1Q2M2I8 961 aa10.31□□□□□ -0.76
HLA-B-253ENST00000481849 PLEKHG4Q58EX7 1191 aa10.31□□□□□ -0.76
HLA-B-253ENST00000481849 RUFY4Q6ZNE9 571 aa10.31□□□□□ -0.76
HLA-B-253ENST00000481849 TMTC3Q6ZXV5 915 aa10.31□□□□□ -0.76
HLA-B-253ENST00000481849 CCDC116Q8IYX3 515 aa10.31□□□□□ -0.76
HLA-B-253ENST00000481849 TMTC2Q8N394 836 aa10.31□□□□□ -0.76
HLA-B-253ENST00000481849 FANCBQ8NB91 859 aa10.31□□□□□ -0.76
HLA-B-253ENST00000481849 LMBR1Q8WVP7 490 aa10.31□□□□□ -0.76
HLA-B-253ENST00000481849 C17orf80Q9BSJ5 609 aa10.31□□□□□ -0.76
HLA-B-253ENST00000481849 RALYQ9UKM9 306 aaKnown RBP10.31□□□□□ -0.76
HLA-B-253ENST00000481849 PCDHA6Q9UN73 950 aa10.31□□□□□ -0.76
HLA-B-253ENST00000481849 PCDHA8Q9Y5H6 950 aa10.31□□□□□ -0.76
HLA-B-253ENST00000481849 TANC1Q9C0D5 1861 aa10.31□□□□□ -0.76
HLA-B-253ENST00000481849 GBF1Q92538 1859 aa10.3□□□□□ -0.76
HLA-B-253ENST00000481849 MED19A0JLT2 244 aaPredicted RBP10.3□□□□□ -0.76
HLA-B-253ENST00000481849 SPDYE3A6NKU9 549 aa10.3□□□□□ -0.76
HLA-B-253ENST00000481849 KCNA2P16389 499 aa10.3□□□□□ -0.76
HLA-B-253ENST00000481849 LIFRP42702 1097 aa10.3□□□□□ -0.76
HLA-B-253ENST00000481849 ERVK-21P61565 698 aa10.3□□□□□ -0.76
HLA-B-253ENST00000481849 IGBP1P78318 339 aa10.3□□□□□ -0.76
HLA-B-253ENST00000481849 PPFIA1Q13136 1202 aa10.3□□□□□ -0.76
HLA-B-253ENST00000481849 MTMR1Q13613 665 aa10.3□□□□□ -0.76
HLA-B-253ENST00000481849 NECTIN1Q15223 517 aa10.3□□□□□ -0.76
HLA-B-253ENST00000481849 XRRA1Q6P2D8 792 aa10.3□□□□□ -0.76
HLA-B-253ENST00000481849 SYNE3Q6ZMZ3 975 aa10.3□□□□□ -0.76
HLA-B-253ENST00000481849 MEIOBQ8N635 442 aa10.3□□□□□ -0.76
HLA-B-253ENST00000481849 GLG1Q92896 1179 aa10.3□□□□□ -0.76
HLA-B-253ENST00000481849 GPRASP2Q96D09 838 aa10.3□□□□□ -0.76
HLA-B-253ENST00000481849 ZBTB10Q96DT7 871 aa10.3□□□□□ -0.76
HLA-B-253ENST00000481849 PGBD1Q96JS3 809 aa10.3□□□□□ -0.76
HLA-B-253ENST00000481849 YME1L1Q96TA2 773 aa10.3□□□□□ -0.76
HLA-B-253ENST00000481849 SENP7Q9BQF6 1050 aa10.3□□□□□ -0.76
HLA-B-253ENST00000481849 MTA3Q9BTC8 594 aa10.3□□□□□ -0.76
HLA-B-253ENST00000481849 NAP1L2Q9ULW6 460 aaPredicted RBP10.3□□□□□ -0.76
HLA-B-253ENST00000481849 COG5Q9UP83 839 aa10.3□□□□□ -0.76
HLA-B-253ENST00000481849 INSL6Q9Y581 213 aa10.3□□□□□ -0.76
HLA-B-253ENST00000481849 BPTFQ12830 3046 aa10.3□□□□□ -0.76
HLA-B-253ENST00000481849 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.29□□□□□ -0.76
HLA-B-253ENST00000481849 GSTTP1A0A1W2PQM5 241 aa10.29□□□□□ -0.76
HLA-B-253ENST00000481849 PI4K2BG5E9Z4 385 aa10.29□□□□□ -0.76
HLA-B-253ENST00000481849 GHRP10912 638 aa10.29□□□□□ -0.76
HLA-B-253ENST00000481849 WWC2Q6AWC2 1192 aa10.29□□□□□ -0.76
HLA-B-253ENST00000481849 GIMAP8Q8ND71 665 aaPredicted RBP10.29□□□□□ -0.76
HLA-B-253ENST00000481849 SEPT1Q8WYJ6 367 aa10.29□□□□□ -0.76
HLA-B-253ENST00000481849 CDHR1Q96JP9 859 aa10.29□□□□□ -0.76
HLA-B-253ENST00000481849 NEK1Q96PY6 1258 aa10.29□□□□□ -0.76
HLA-B-253ENST00000481849 UIMC1Q96RL1 719 aa10.29□□□□□ -0.76
HLA-B-253ENST00000481849 ARHGAP9Q9BRR9 750 aa10.29□□□□□ -0.76
HLA-B-253ENST00000481849 IFIH1Q9BYX4 1025 aaKnown RBP10.29□□□□□ -0.76
HLA-B-253ENST00000481849 FAM49AQ9H0Q0 323 aaPredicted RBP10.29□□□□□ -0.76
HLA-B-253ENST00000481849 UBIAD1Q9Y5Z9 338 aa10.29□□□□□ -0.76
HLA-B-253ENST00000481849 NRCAMQ92823 1304 aa10.29□□□□□ -0.76
HLA-B-253ENST00000481849 CAND2O75155 1236 aa10.28□□□□□ -0.76
HLA-B-253ENST00000481849 CSPG5O95196 566 aa10.28□□□□□ -0.76
HLA-B-253ENST00000481849 CHRNA1P02708 482 aa10.28□□□□□ -0.76
HLA-B-253ENST00000481849 NAPAP54920 295 aa10.28□□□□□ -0.76
HLA-B-253ENST00000481849 ADAM17P78536 824 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms