RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 RILPL1Q5EBL4 403 aa11.88□□□□□ -0.51
SSBP1-210ENST00000481508 FOXD4L5Q5VV16 416 aaPredicted RBP11.88□□□□□ -0.51
SSBP1-210ENST00000481508 ANO5Q75V66 913 aa11.88□□□□□ -0.51
SSBP1-210ENST00000481508 DEFB128Q7Z7B8 93 aa11.88□□□□□ -0.51
SSBP1-210ENST00000481508 ALYREFQ86V81 257 aaKnown RBP11.88□□□□□ -0.51
SSBP1-210ENST00000481508 CAGE1Q8TC20 777 aa11.88□□□□□ -0.51
SSBP1-210ENST00000481508 FOXD4L4Q8WXT5 416 aaPredicted RBP11.88□□□□□ -0.51
SSBP1-210ENST00000481508 BBXQ8WY36 941 aaPredicted RBP11.88□□□□□ -0.51
SSBP1-210ENST00000481508 EIF2AK1Q9BQI3 630 aaKnown RBP11.88□□□□□ -0.51
SSBP1-210ENST00000481508 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.88□□□□□ -0.51
SSBP1-210ENST00000481508 LXNQ9BS40 222 aa11.88□□□□□ -0.51
SSBP1-210ENST00000481508 FAM49AQ9H0Q0 323 aaPredicted RBP11.88□□□□□ -0.51
SSBP1-210ENST00000481508 PCDHA12Q9UN75 941 aa11.88□□□□□ -0.51
SSBP1-210ENST00000481508 RRN3P2A6NIE6 340 aa11.87□□□□□ -0.51
SSBP1-210ENST00000481508 PP2D1A8MPX8 630 aa11.87□□□□□ -0.51
SSBP1-210ENST00000481508 MED24O75448 989 aa11.87□□□□□ -0.51
SSBP1-210ENST00000481508 SLITRK3O94933 977 aa11.87□□□□□ -0.51
SSBP1-210ENST00000481508 CHRNA1P02708 482 aa11.87□□□□□ -0.51
SSBP1-210ENST00000481508 SPATA31C1P0DKV0 1188 aa11.87□□□□□ -0.51
SSBP1-210ENST00000481508 GNAT1P11488 350 aa11.87□□□□□ -0.51
SSBP1-210ENST00000481508 PDCP20941 246 aa11.87□□□□□ -0.51
SSBP1-210ENST00000481508 NPEPPSP55786 919 aa11.87□□□□□ -0.51
SSBP1-210ENST00000481508 PSMC5P62195 406 aa11.87□□□□□ -0.51
SSBP1-210ENST00000481508 ATP2C1P98194 919 aaPredicted RBP11.87□□□□□ -0.51
SSBP1-210ENST00000481508 GRIN1Q05586 938 aa11.87□□□□□ -0.51
SSBP1-210ENST00000481508 TMEM62Q0P6H9 643 aa11.87□□□□□ -0.51
SSBP1-210ENST00000481508 PPIGQ13427 754 aaKnown RBP eCLIP11.87□□□□□ -0.51
SSBP1-210ENST00000481508 BFSP2Q13515 415 aa11.87□□□□□ -0.51
SSBP1-210ENST00000481508 ECM1Q16610 540 aa11.87□□□□□ -0.51
SSBP1-210ENST00000481508 ZNF484Q5JVG2 852 aa11.87□□□□□ -0.51
SSBP1-210ENST00000481508 TMEM240Q5SV17 173 aa11.87□□□□□ -0.51
SSBP1-210ENST00000481508 ZNF365Q70YC5 407 aa11.87□□□□□ -0.51
SSBP1-210ENST00000481508 TMEM199Q8N511 208 aa11.87□□□□□ -0.51
SSBP1-210ENST00000481508 LINC01465Q8N7H1 131 aa11.87□□□□□ -0.51
SSBP1-210ENST00000481508 DNAJB3Q8WWF6 145 aa11.87□□□□□ -0.51
SSBP1-210ENST00000481508 ASB2Q96Q27 587 aa11.87□□□□□ -0.51
SSBP1-210ENST00000481508 HSD17B14Q9BPX1 270 aa11.87□□□□□ -0.51
SSBP1-210ENST00000481508 IL23AQ9NPF7 189 aa11.87□□□□□ -0.51
SSBP1-210ENST00000481508 THEGQ9P2T0 379 aa11.87□□□□□ -0.51
SSBP1-210ENST00000481508 SEPT9Q9UHD8 586 aaPredicted RBP11.87□□□□□ -0.51
SSBP1-210ENST00000481508 PCDHA2Q9Y5H9 948 aa11.87□□□□□ -0.51
SSBP1-210ENST00000481508 CLIC4Q9Y696 253 aa11.87□□□□□ -0.51
SSBP1-210ENST00000481508 COL1A2P08123 1366 aa11.87□□□□□ -0.51
SSBP1-210ENST00000481508 PRRC2BQ5JSZ5 2229 aaKnown RBP11.86□□□□□ -0.51
SSBP1-210ENST00000481508 DDX11L8A8MPP1 907 aa11.86□□□□□ -0.51
SSBP1-210ENST00000481508 P4HBP07237 508 aaKnown RBP11.86□□□□□ -0.51
SSBP1-210ENST00000481508 QARSP47897 775 aaKnown RBP11.86□□□□□ -0.51
SSBP1-210ENST00000481508 CLCN3P51790 818 aa11.86□□□□□ -0.51
SSBP1-210ENST00000481508 DRP2Q13474 957 aa11.86□□□□□ -0.51
SSBP1-210ENST00000481508 MTERF2Q49AM1 385 aa11.86□□□□□ -0.51
SSBP1-210ENST00000481508 FAM26DQ5JW98 314 aa11.86□□□□□ -0.51
SSBP1-210ENST00000481508 BRAPQ7Z569 592 aa11.86□□□□□ -0.51
SSBP1-210ENST00000481508 LRRC71Q8N4P6 559 aa11.86□□□□□ -0.51
SSBP1-210ENST00000481508 RETREG2Q8NC44 543 aa11.86□□□□□ -0.51
SSBP1-210ENST00000481508 CHAMP1Q96JM3 812 aa11.86□□□□□ -0.51
SSBP1-210ENST00000481508 FAM167AQ96KS9 214 aa11.86□□□□□ -0.51
SSBP1-210ENST00000481508 PPP1R16BQ96T49 567 aa11.86□□□□□ -0.51
SSBP1-210ENST00000481508 TMEM121BQ9BXQ6 578 aaPredicted RBP11.86□□□□□ -0.51
SSBP1-210ENST00000481508 NIFKQ9BYG3 293 aaKnown RBP11.86□□□□□ -0.51
SSBP1-210ENST00000481508 CXXC1Q9P0U4 656 aaPredicted RBP11.86□□□□□ -0.51
SSBP1-210ENST00000481508 HCN4Q9Y3Q4 1203 aa11.86□□□□□ -0.51
SSBP1-210ENST00000481508 RSPH10B2B2RC85 870 aa11.85□□□□□ -0.51
SSBP1-210ENST00000481508 HSP90AA1P07900 732 aaKnown RBP11.85□□□□□ -0.51
SSBP1-210ENST00000481508 RSPH10BP0C881 870 aa11.85□□□□□ -0.51
SSBP1-210ENST00000481508 CDC25AP30304 524 aa11.85□□□□□ -0.51
SSBP1-210ENST00000481508 PTPAQ15257 358 aa11.85□□□□□ -0.51
SSBP1-210ENST00000481508 SF3A1Q15459 793 aaKnown RBP11.85□□□□□ -0.51
SSBP1-210ENST00000481508 XKR3Q5GH77 459 aa11.85□□□□□ -0.51
SSBP1-210ENST00000481508 CATSPER3Q86XQ3 398 aa11.85□□□□□ -0.51
SSBP1-210ENST00000481508 TPH2Q8IWU9 490 aa11.85□□□□□ -0.51
SSBP1-210ENST00000481508 C4orf19Q8IY42 314 aa11.85□□□□□ -0.51
SSBP1-210ENST00000481508 KIAA0319LQ8IZA0 1049 aa11.85□□□□□ -0.51
SSBP1-210ENST00000481508 CCDC155Q8N6L0 562 aa11.85□□□□□ -0.51
SSBP1-210ENST00000481508 USP28Q96RU2 1077 aa11.85□□□□□ -0.51
SSBP1-210ENST00000481508 LRFN3Q9BTN0 628 aa11.85□□□□□ -0.51
SSBP1-210ENST00000481508 MMTAG2Q9BU76 263 aaKnown RBP11.85□□□□□ -0.51
SSBP1-210ENST00000481508 CDHR5Q9HBB8 845 aa11.85□□□□□ -0.51
SSBP1-210ENST00000481508 ZDHHC9Q9Y397 364 aa11.85□□□□□ -0.51
SSBP1-210ENST00000481508 CDY2AQ9Y6F7 541 aa11.85□□□□□ -0.51
SSBP1-210ENST00000481508 SMIM35A0A1B0GVV1 85 aa11.84□□□□□ -0.51
SSBP1-210ENST00000481508 CXCL10P02778 98 aa11.84□□□□□ -0.51
SSBP1-210ENST00000481508 VTNP04004 478 aa11.84□□□□□ -0.51
SSBP1-210ENST00000481508 PRPHP41219 470 aa11.84□□□□□ -0.51
SSBP1-210ENST00000481508 MRPS6P82932 125 aaKnown RBP11.84□□□□□ -0.51
SSBP1-210ENST00000481508 CCDC85BQ15834 202 aaPredicted RBP11.84□□□□□ -0.51
SSBP1-210ENST00000481508 RASIP1Q5U651 963 aa11.84□□□□□ -0.51
SSBP1-210ENST00000481508 TAF2Q6P1X5 1199 aa11.84□□□□□ -0.51
SSBP1-210ENST00000481508 OTOP2Q7RTS6 562 aa11.84□□□□□ -0.51
SSBP1-210ENST00000481508 RPAINQ86UA6 219 aa11.84□□□□□ -0.51
SSBP1-210ENST00000481508 IGSF22Q8N9C0 903 aa11.84□□□□□ -0.51
SSBP1-210ENST00000481508 ZNF668Q96K58 619 aaPredicted RBP11.84□□□□□ -0.51
SSBP1-210ENST00000481508 EPHX3Q9H6B9 360 aa11.84□□□□□ -0.51
SSBP1-210ENST00000481508 NRBP2Q9NSY0 501 aa11.84□□□□□ -0.51
SSBP1-210ENST00000481508 ZDBF2Q9HCK1 2354 aa11.84□□□□□ -0.51
SSBP1-210ENST00000481508 VWA3AA6NCI4 1184 aa11.83□□□□□ -0.52
SSBP1-210ENST00000481508 FAM86C2PA6NEL3 165 aa11.83□□□□□ -0.52
SSBP1-210ENST00000481508 GRXCR1A8MXD5 290 aa11.83□□□□□ -0.52
SSBP1-210ENST00000481508 CAND2O75155 1236 aa11.83□□□□□ -0.52
SSBP1-210ENST00000481508 LYPLA2O95372 231 aa11.83□□□□□ -0.52
SSBP1-210ENST00000481508 F13A1P00488 732 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms