RNA–Protein interactions for RNA: ENST00000481502.5

SYNE1-225, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 3

Gene SYNE1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-225ENST00000481502 OLFML3Q9NRN5 406 aa9.17□□□□□ -0.94
SYNE1-225ENST00000481502 PCDHA5Q9Y5H7 936 aa9.17□□□□□ -0.94
SYNE1-225ENST00000481502 ZSWIM8A7E2V4 1837 aa9.17□□□□□ -0.94
SYNE1-225ENST00000481502 MBLAC1A4D2B0 266 aaPredicted RBP9.16□□□□□ -0.94
SYNE1-225ENST00000481502 SGPL1O95470 568 aa9.16□□□□□ -0.94
SYNE1-225ENST00000481502 PRKCSHP14314 528 aaPredicted RBP9.16□□□□□ -0.94
SYNE1-225ENST00000481502 PSEN2P49810 448 aa9.16□□□□□ -0.94
SYNE1-225ENST00000481502 SMTNP53814 917 aa9.16□□□□□ -0.94
SYNE1-225ENST00000481502 ZNF445P59923 1031 aa9.16□□□□□ -0.94
SYNE1-225ENST00000481502 EHHADHQ08426 723 aa9.16□□□□□ -0.94
SYNE1-225ENST00000481502 TBC1D8BQ0IIM8 1120 aa9.16□□□□□ -0.94
SYNE1-225ENST00000481502 GIT2Q14161 759 aa9.16□□□□□ -0.94
SYNE1-225ENST00000481502 MFSD10Q14728 455 aa9.16□□□□□ -0.94
SYNE1-225ENST00000481502 LRRC41Q15345 812 aa9.16□□□□□ -0.94
SYNE1-225ENST00000481502 PCBP1Q15365 356 aaKnown RBP eCLIP9.16□□□□□ -0.94
SYNE1-225ENST00000481502 KIAA0753Q2KHM9 967 aa9.16□□□□□ -0.94
SYNE1-225ENST00000481502 ARSHQ5FYA8 562 aa9.16□□□□□ -0.94
SYNE1-225ENST00000481502 TMEM63BQ5T3F8 832 aa9.16□□□□□ -0.94
SYNE1-225ENST00000481502 GJC2Q5T442 439 aaPredicted RBP9.16□□□□□ -0.94
SYNE1-225ENST00000481502 C1orf53Q5VUE5 145 aa9.16□□□□□ -0.94
SYNE1-225ENST00000481502 IER5Q5VY09 327 aa9.16□□□□□ -0.94
SYNE1-225ENST00000481502 SASS6Q6UVJ0 657 aa9.16□□□□□ -0.94
SYNE1-225ENST00000481502 STXBP4Q6ZWJ1 553 aa9.16□□□□□ -0.94
SYNE1-225ENST00000481502 RPAINQ86UA6 219 aa9.16□□□□□ -0.94
SYNE1-225ENST00000481502 GPBP1Q86WP2 473 aa9.16□□□□□ -0.94
SYNE1-225ENST00000481502 MLKLQ8NB16 471 aa9.16□□□□□ -0.94
SYNE1-225ENST00000481502 SPIRE2Q8WWL2 714 aa9.16□□□□□ -0.94
SYNE1-225ENST00000481502 KAT2BQ92831 832 aa9.16□□□□□ -0.94
SYNE1-225ENST00000481502 GLT1D1Q96MS3 346 aa9.16□□□□□ -0.94
SYNE1-225ENST00000481502 UIMC1Q96RL1 719 aa9.16□□□□□ -0.94
SYNE1-225ENST00000481502 RNF208Q9H0X6 261 aa9.16□□□□□ -0.94
SYNE1-225ENST00000481502 ST6GALNAC4Q9H4F1 302 aa9.16□□□□□ -0.94
SYNE1-225ENST00000481502 PARVGQ9HBI0 331 aa9.16□□□□□ -0.94
SYNE1-225ENST00000481502 ANO10Q9NW15 660 aa9.16□□□□□ -0.94
SYNE1-225ENST00000481502 SEPT9Q9UHD8 586 aaPredicted RBP9.16□□□□□ -0.94
SYNE1-225ENST00000481502 DACH1Q9UI36 760 aa9.16□□□□□ -0.94
SYNE1-225ENST00000481502 PHF24Q9UPV7 400 aa9.16□□□□□ -0.94
SYNE1-225ENST00000481502 TRPC6Q9Y210 931 aa9.16□□□□□ -0.94
SYNE1-225ENST00000481502 SMIM35A0A1B0GVV1 85 aa9.15□□□□□ -0.94
SYNE1-225ENST00000481502 MYMKA6NI61 221 aa9.15□□□□□ -0.94
SYNE1-225ENST00000481502 KBTBD13C9JR72 458 aa9.15□□□□□ -0.94
SYNE1-225ENST00000481502 KLRC4O43908 158 aa9.15□□□□□ -0.94
SYNE1-225ENST00000481502 CAND2O75155 1236 aa9.15□□□□□ -0.94
SYNE1-225ENST00000481502 PGK1P00558 417 aa9.15□□□□□ -0.94
SYNE1-225ENST00000481502 RPN1P04843 607 aaKnown RBP9.15□□□□□ -0.94
SYNE1-225ENST00000481502 KRT18P05783 430 aaKnown RBP9.15□□□□□ -0.94
SYNE1-225ENST00000481502 ASGR1P07306 291 aa9.15□□□□□ -0.94
SYNE1-225ENST00000481502 CCDC192P0DO97 292 aa9.15□□□□□ -0.94
SYNE1-225ENST00000481502 CCL5P13501 91 aa9.15□□□□□ -0.94
SYNE1-225ENST00000481502 INSRRP14616 1297 aa9.15□□□□□ -0.94
SYNE1-225ENST00000481502 AFMP43652 599 aa9.15□□□□□ -0.94
SYNE1-225ENST00000481502 GJA8P48165 433 aa9.15□□□□□ -0.94
SYNE1-225ENST00000481502 ACLYP53396 1101 aa9.15□□□□□ -0.94
SYNE1-225ENST00000481502 POLGP54098 1239 aaPredicted RBP9.15□□□□□ -0.94
SYNE1-225ENST00000481502 SNRPFP62306 86 aaKnown RBP9.15□□□□□ -0.94
SYNE1-225ENST00000481502 ADAM17P78536 824 aa9.15□□□□□ -0.94
SYNE1-225ENST00000481502 PPFIA1Q13136 1202 aa9.15□□□□□ -0.94
SYNE1-225ENST00000481502 KCNA10Q16322 511 aa9.15□□□□□ -0.94
SYNE1-225ENST00000481502 ZNF658Q5TYW1 1059 aaPredicted RBP9.15□□□□□ -0.94
SYNE1-225ENST00000481502 TAF2Q6P1X5 1199 aa9.15□□□□□ -0.94
SYNE1-225ENST00000481502 C7orf31Q8N865 590 aa9.15□□□□□ -0.94
SYNE1-225ENST00000481502 SLC43A3Q8NBI5 491 aa9.15□□□□□ -0.94
SYNE1-225ENST00000481502 SH3TC2Q8TF17 1288 aa9.15□□□□□ -0.94
SYNE1-225ENST00000481502 LRRC15Q8TF66 581 aa9.15□□□□□ -0.94
SYNE1-225ENST00000481502 TMEM174Q8WUU8 243 aa9.15□□□□□ -0.94
SYNE1-225ENST00000481502 PLIN2Q99541 437 aa9.15□□□□□ -0.94
SYNE1-225ENST00000481502 NFKBIZQ9BYH8 718 aa9.15□□□□□ -0.94
SYNE1-225ENST00000481502 NAT10Q9H0A0 1025 aaKnown RBP9.15□□□□□ -0.94
SYNE1-225ENST00000481502 UNC93B1Q9H1C4 597 aa9.15□□□□□ -0.94
SYNE1-225ENST00000481502 RNPEPQ9H4A4 650 aa9.15□□□□□ -0.94
SYNE1-225ENST00000481502 PANK4Q9NVE7 773 aa9.15□□□□□ -0.94
SYNE1-225ENST00000481502 SSUH2Q9Y2M2 353 aa9.15□□□□□ -0.94
SYNE1-225ENST00000481502 PCDHA2Q9Y5H9 948 aa9.15□□□□□ -0.94
SYNE1-225ENST00000481502 WDR81Q562E7 1941 aa9.15□□□□□ -0.95
SYNE1-225ENST00000481502 UBE4BO95155 1302 aa9.14□□□□□ -0.95
SYNE1-225ENST00000481502 MROH7Q68CQ1 1323 aa9.14□□□□□ -0.95
SYNE1-225ENST00000481502 SCN10AQ9Y5Y9 1956 aa9.14□□□□□ -0.95
SYNE1-225ENST00000481502 C17orf102A2RUQ5 167 aa9.14□□□□□ -0.95
SYNE1-225ENST00000481502 ZBTB42B2RXF5 422 aa9.14□□□□□ -0.95
SYNE1-225ENST00000481502 ZBTB39O15060 712 aa9.14□□□□□ -0.95
SYNE1-225ENST00000481502 EIF3DO15371 548 aaKnown RBP eCLIP9.14□□□□□ -0.95
SYNE1-225ENST00000481502 TBCAO75347 108 aaKnown RBP9.14□□□□□ -0.95
SYNE1-225ENST00000481502 SSBP05455 408 aaKnown RBP eCLIP9.14□□□□□ -0.95
SYNE1-225ENST00000481502 MYL3P08590 195 aa9.14□□□□□ -0.95
SYNE1-225ENST00000481502 PLS3P13797 630 aa9.14□□□□□ -0.95
SYNE1-225ENST00000481502 ERCC5P28715 1186 aaPredicted RBP9.14□□□□□ -0.95
SYNE1-225ENST00000481502 ARL2P36404 184 aa9.14□□□□□ -0.95
SYNE1-225ENST00000481502 NAMPTP43490 491 aa9.14□□□□□ -0.95
SYNE1-225ENST00000481502 NPEPPSP55786 919 aa9.14□□□□□ -0.95
SYNE1-225ENST00000481502 ASIC1P78348 528 aa9.14□□□□□ -0.95
SYNE1-225ENST00000481502 BEX3Q00994 111 aa9.14□□□□□ -0.95
SYNE1-225ENST00000481502 PNOCQ13519 176 aa9.14□□□□□ -0.95
SYNE1-225ENST00000481502 STIM1Q13586 685 aa9.14□□□□□ -0.95
SYNE1-225ENST00000481502 CUL4BQ13620 913 aa9.14□□□□□ -0.95
SYNE1-225ENST00000481502 MORC3Q14149 939 aa9.14□□□□□ -0.95
SYNE1-225ENST00000481502 HSP90AA2PQ14568 343 aaPredicted RBP9.14□□□□□ -0.95
SYNE1-225ENST00000481502 EMC2Q15006 297 aa9.14□□□□□ -0.95
SYNE1-225ENST00000481502 GRIK4Q16099 956 aa9.14□□□□□ -0.95
SYNE1-225ENST00000481502 CAMK4Q16566 473 aa9.14□□□□□ -0.95
SYNE1-225ENST00000481502 ZSCAN23Q3MJ62 389 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms