RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 SLC17A8Q8NDX2 589 aa12.82□□□□□ -0.36
RAPGEF1-207ENST00000481260 ZBED2Q9BTP6 218 aa12.82□□□□□ -0.36
RAPGEF1-207ENST00000481260 NIFKQ9BYG3 293 aaKnown RBP12.82□□□□□ -0.36
RAPGEF1-207ENST00000481260 ADAMTS10Q9H324 1103 aa12.82□□□□□ -0.36
RAPGEF1-207ENST00000481260 UPF2Q9HAU5 1272 aaKnown RBP12.82□□□□□ -0.36
RAPGEF1-207ENST00000481260 ERVK-5Q9HDB9 667 aa12.82□□□□□ -0.36
RAPGEF1-207ENST00000481260 EVPLQ92817 2033 aa12.82□□□□□ -0.36
RAPGEF1-207ENST00000481260 MYH9P35579 1960 aaKnown RBP12.81□□□□□ -0.36
RAPGEF1-207ENST00000481260 LINC01553A4QN01 128 aa12.81□□□□□ -0.36
RAPGEF1-207ENST00000481260 DLL1O00548 723 aa12.81□□□□□ -0.36
RAPGEF1-207ENST00000481260 NEMFO60524 1076 aa12.81□□□□□ -0.36
RAPGEF1-207ENST00000481260 LPXNO60711 386 aa12.81□□□□□ -0.36
RAPGEF1-207ENST00000481260 AMHP03971 560 aa12.81□□□□□ -0.36
RAPGEF1-207ENST00000481260 NLRP11P59045 1033 aaKnown RBP12.81□□□□□ -0.36
RAPGEF1-207ENST00000481260 PSMC5P62195 406 aa12.81□□□□□ -0.36
RAPGEF1-207ENST00000481260 HMGN5P82970 282 aaKnown RBP12.81□□□□□ -0.36
RAPGEF1-207ENST00000481260 CCDC85BQ15834 202 aaPredicted RBP12.81□□□□□ -0.36
RAPGEF1-207ENST00000481260 IER5Q5VY09 327 aa12.81□□□□□ -0.36
RAPGEF1-207ENST00000481260 NOSTRINQ8IVI9 506 aa12.81□□□□□ -0.36
RAPGEF1-207ENST00000481260 C4orf32Q8N8J7 132 aa12.81□□□□□ -0.36
RAPGEF1-207ENST00000481260 RDM1Q8NG50 284 aa12.81□□□□□ -0.36
RAPGEF1-207ENST00000481260 MAFAQ8NHW3 353 aaPredicted RBP12.81□□□□□ -0.36
RAPGEF1-207ENST00000481260 PPM1EQ8WY54 764 aa12.81□□□□□ -0.36
RAPGEF1-207ENST00000481260 TOP1MTQ969P6 601 aa12.81□□□□□ -0.36
RAPGEF1-207ENST00000481260 FAM167AQ96KS9 214 aa12.81□□□□□ -0.36
RAPGEF1-207ENST00000481260 RAD9AQ99638 391 aa12.81□□□□□ -0.36
RAPGEF1-207ENST00000481260 LXNQ9BS40 222 aa12.81□□□□□ -0.36
RAPGEF1-207ENST00000481260 C17orf80Q9BSJ5 609 aa12.81□□□□□ -0.36
RAPGEF1-207ENST00000481260 NRBP2Q9NSY0 501 aa12.81□□□□□ -0.36
RAPGEF1-207ENST00000481260 LOXHD1Q8IVV2 1947 aa12.81□□□□□ -0.36
RAPGEF1-207ENST00000481260 TBX3O15119 743 aa12.8□□□□□ -0.36
RAPGEF1-207ENST00000481260 MARCH6O60337 910 aa12.8□□□□□ -0.36
RAPGEF1-207ENST00000481260 SLITRK3O94933 977 aa12.8□□□□□ -0.36
RAPGEF1-207ENST00000481260 IGFBP4P22692 258 aa12.8□□□□□ -0.36
RAPGEF1-207ENST00000481260 QARSP47897 775 aaKnown RBP12.8□□□□□ -0.36
RAPGEF1-207ENST00000481260 HTRA4P83105 476 aaPredicted RBP12.8□□□□□ -0.36
RAPGEF1-207ENST00000481260 NFX1Q12986 1120 aaKnown RBP12.8□□□□□ -0.36
RAPGEF1-207ENST00000481260 PAK2Q13177 524 aa12.8□□□□□ -0.36
RAPGEF1-207ENST00000481260 EPHA7Q15375 998 aa12.8□□□□□ -0.36
RAPGEF1-207ENST00000481260 SAFBQ15424 915 aaKnown RBP eCLIP12.8□□□□□ -0.36
RAPGEF1-207ENST00000481260 IL17AQ16552 155 aa12.8□□□□□ -0.36
RAPGEF1-207ENST00000481260 XKR3Q5GH77 459 aa12.8□□□□□ -0.36
RAPGEF1-207ENST00000481260 TTC38Q5R3I4 469 aa12.8□□□□□ -0.36
RAPGEF1-207ENST00000481260 CRIPAKQ8N1N5 446 aa12.8□□□□□ -0.36
RAPGEF1-207ENST00000481260 GDPD5Q8WTR4 605 aa12.8□□□□□ -0.36
RAPGEF1-207ENST00000481260 EIF2AK1Q9BQI3 630 aaKnown RBP12.8□□□□□ -0.36
RAPGEF1-207ENST00000481260 FOXP1Q9H334 677 aaPredicted RBP12.8□□□□□ -0.36
RAPGEF1-207ENST00000481260 TTC12Q9H892 705 aaPredicted RBP12.8□□□□□ -0.36
RAPGEF1-207ENST00000481260 HCSTQ9UBK5 93 aa12.8□□□□□ -0.36
RAPGEF1-207ENST00000481260 ST3GAL5Q9UNP4 418 aa12.8□□□□□ -0.36
RAPGEF1-207ENST00000481260 AKT3Q9Y243 479 aa12.8□□□□□ -0.36
RAPGEF1-207ENST00000481260 PCDHB6Q9Y5E3 794 aa12.8□□□□□ -0.36
RAPGEF1-207ENST00000481260 KDM3AQ9Y4C1 1321 aa12.8□□□□□ -0.36
RAPGEF1-207ENST00000481260 IGKV6-21A0A0C4DH24 114 aa12.79□□□□□ -0.36
RAPGEF1-207ENST00000481260 MED24O75448 989 aa12.79□□□□□ -0.36
RAPGEF1-207ENST00000481260 P4HBP07237 508 aaKnown RBP12.79□□□□□ -0.36
RAPGEF1-207ENST00000481260 LINC00271P0C7V0 271 aa12.79□□□□□ -0.36
RAPGEF1-207ENST00000481260 SPATA31C1P0DKV0 1188 aa12.79□□□□□ -0.36
RAPGEF1-207ENST00000481260 U2AF2P26368 475 aaKnown RBP eCLIP12.79□□□□□ -0.362e-7■□□□□ 8.7
RAPGEF1-207ENST00000481260 GPC3P51654 580 aa12.79□□□□□ -0.36
RAPGEF1-207ENST00000481260 TBC1D8BQ0IIM8 1120 aa12.79□□□□□ -0.36
RAPGEF1-207ENST00000481260 ECM1Q16610 540 aa12.79□□□□□ -0.36
RAPGEF1-207ENST00000481260 TPH2Q8IWU9 490 aa12.79□□□□□ -0.36
RAPGEF1-207ENST00000481260 MICALL1Q8N3F8 863 aa12.79□□□□□ -0.36
RAPGEF1-207ENST00000481260 NME8Q8N427 588 aa12.79□□□□□ -0.36
RAPGEF1-207ENST00000481260 SP7Q8TDD2 431 aaPredicted RBP12.79□□□□□ -0.36
RAPGEF1-207ENST00000481260 APBB2Q92870 758 aa12.79□□□□□ -0.36
RAPGEF1-207ENST00000481260 TMEM143Q96AN5 459 aa12.79□□□□□ -0.36
RAPGEF1-207ENST00000481260 HSD17B14Q9BPX1 270 aa12.79□□□□□ -0.36
RAPGEF1-207ENST00000481260 RC3H2Q9HBD1 1191 aaKnown RBP12.79□□□□□ -0.36
RAPGEF1-207ENST00000481260 CYP26B1Q9NR63 512 aa12.79□□□□□ -0.36
RAPGEF1-207ENST00000481260 FOXD4L1Q9NU39 408 aa12.79□□□□□ -0.36
RAPGEF1-207ENST00000481260 PCDHA12Q9UN75 941 aa12.79□□□□□ -0.36
RAPGEF1-207ENST00000481260 COL4A4P53420 1690 aaPredicted RBP12.78□□□□□ -0.36
RAPGEF1-207ENST00000481260 PP2D1A8MPX8 630 aa12.78□□□□□ -0.36
RAPGEF1-207ENST00000481260 M0QZ92 97 aa12.78□□□□□ -0.36
RAPGEF1-207ENST00000481260 MAGEB2O15479 319 aa12.78□□□□□ -0.36
RAPGEF1-207ENST00000481260 EFCAB14O75071 495 aa12.78□□□□□ -0.36
RAPGEF1-207ENST00000481260 MAFO75444 373 aaPredicted RBP12.78□□□□□ -0.36
RAPGEF1-207ENST00000481260 RPS6KA5O75582 802 aa12.78□□□□□ -0.36
RAPGEF1-207ENST00000481260 YWHABP31946 246 aaKnown RBP12.78□□□□□ -0.36
RAPGEF1-207ENST00000481260 TECP42680 631 aa12.78□□□□□ -0.36
RAPGEF1-207ENST00000481260 CRYBB1P53674 252 aaPredicted RBP12.78□□□□□ -0.36
RAPGEF1-207ENST00000481260 GRB10Q13322 594 aa12.78□□□□□ -0.36
RAPGEF1-207ENST00000481260 DSC3Q14574 896 aa12.78□□□□□ -0.36
RAPGEF1-207ENST00000481260 MCTP1Q6DN14 999 aa12.78□□□□□ -0.36
RAPGEF1-207ENST00000481260 SLFN12Q8IYM2 578 aa12.78□□□□□ -0.36
RAPGEF1-207ENST00000481260 PIGOQ8TEQ8 1089 aa12.78□□□□□ -0.36
RAPGEF1-207ENST00000481260 TNPO1Q92973 898 aaKnown RBP12.78□□□□□ -0.36
RAPGEF1-207ENST00000481260 CEP170P1Q96L14 293 aa12.78□□□□□ -0.36
RAPGEF1-207ENST00000481260 NAP1L4Q99733 375 aaKnown RBP12.78□□□□□ -0.36
RAPGEF1-207ENST00000481260 TSPYL2Q9H2G4 693 aaPredicted RBP12.78□□□□□ -0.36
RAPGEF1-207ENST00000481260 XPNPEP1Q9NQW7 623 aa12.78□□□□□ -0.36
RAPGEF1-207ENST00000481260 SUCLA2Q9P2R7 463 aaPredicted RBP12.78□□□□□ -0.36
RAPGEF1-207ENST00000481260 CEP131Q9UPN4 1083 aa12.78□□□□□ -0.36
RAPGEF1-207ENST00000481260 PRRC2BQ5JSZ5 2229 aaKnown RBP12.78□□□□□ -0.36
RAPGEF1-207ENST00000481260 A0A087WZ62 844 aa12.77□□□□□ -0.37
RAPGEF1-207ENST00000481260 BAG4O95429 457 aaKnown RBP12.77□□□□□ -0.37
RAPGEF1-207ENST00000481260 OR52Z1P0C646 297 aa12.77□□□□□ -0.37
RAPGEF1-207ENST00000481260 ERVK-21P61565 698 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms