RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 VTA1Q9NP79 307 aa11.16□□□□□ -0.62
PRPF4B-206ENST00000481109 STK39Q9UEW8 545 aa11.16□□□□□ -0.62
PRPF4B-206ENST00000481109 TDRKHQ9Y2W6 561 aaKnown RBP11.16□□□□□ -0.62
PRPF4B-206ENST00000481109 MINK1Q8N4C8 1332 aaPredicted RBP11.15□□□□□ -0.62
PRPF4B-206ENST00000481109 GOLGA8CPA6NN73 597 aa11.15□□□□□ -0.62
PRPF4B-206ENST00000481109 IDH3BO43837 385 aa11.15□□□□□ -0.62
PRPF4B-206ENST00000481109 JAK2O60674 1132 aa11.15□□□□□ -0.62
PRPF4B-206ENST00000481109 LDHCP07864 332 aa11.15□□□□□ -0.62
PRPF4B-206ENST00000481109 PFKFB1P16118 471 aa11.15□□□□□ -0.62
PRPF4B-206ENST00000481109 PRKACBP22694 351 aa11.15□□□□□ -0.62
PRPF4B-206ENST00000481109 NONOQ15233 471 aaKnown RBP eCLIP11.15□□□□□ -0.62
PRPF4B-206ENST00000481109 RABL6Q3YEC7 729 aaPredicted RBP11.15□□□□□ -0.62
PRPF4B-206ENST00000481109 TTC23LQ6PF05 361 aa11.15□□□□□ -0.62
PRPF4B-206ENST00000481109 PPP1R42Q7Z4L9 355 aa11.15□□□□□ -0.62
PRPF4B-206ENST00000481109 ZNF598Q86UK7 904 aaKnown RBP11.15□□□□□ -0.62
PRPF4B-206ENST00000481109 USHBP1Q8N6Y0 703 aa11.15□□□□□ -0.62
PRPF4B-206ENST00000481109 OR7G1Q8NGA0 311 aa11.15□□□□□ -0.62
PRPF4B-206ENST00000481109 EGLN2Q96KS0 407 aa11.15□□□□□ -0.62
PRPF4B-206ENST00000481109 THAP9Q9H5L6 903 aa11.15□□□□□ -0.62
PRPF4B-206ENST00000481109 ADD3Q9UEY8 706 aaKnown RBP11.15□□□□□ -0.62
PRPF4B-206ENST00000481109 KIAA1257Q9ULG3 409 aa11.15□□□□□ -0.62
PRPF4B-206ENST00000481109 SIGLEC1Q9BZZ2 1709 aa11.15□□□□□ -0.62
PRPF4B-206ENST00000481109 TULP4Q9NRJ4 1543 aa11.15□□□□□ -0.62
PRPF4B-206ENST00000481109 NOTOA8MTQ0 251 aa11.14□□□□□ -0.63
PRPF4B-206ENST00000481109 B4GALT4O60513 344 aa11.14□□□□□ -0.63
PRPF4B-206ENST00000481109 AFPP02771 609 aaKnown RBP11.14□□□□□ -0.63
PRPF4B-206ENST00000481109 CYP1A2P05177 515 aa11.14□□□□□ -0.63
PRPF4B-206ENST00000481109 HSD17B3P37058 310 aa11.14□□□□□ -0.63
PRPF4B-206ENST00000481109 BASP1P80723 227 aaKnown RBP11.14□□□□□ -0.63
PRPF4B-206ENST00000481109 TWISTNBQ3B726 338 aaPredicted RBP11.14□□□□□ -0.63
PRPF4B-206ENST00000481109 TMTC4Q5T4D3 741 aa11.14□□□□□ -0.63
PRPF4B-206ENST00000481109 ANKRD13DQ6ZTN6 518 aa11.14□□□□□ -0.63
PRPF4B-206ENST00000481109 CRACR2BQ8N4Y2 399 aaPredicted RBP11.14□□□□□ -0.63
PRPF4B-206ENST00000481109 SUPT20HQ8NEM7 779 aa11.14□□□□□ -0.63
PRPF4B-206ENST00000481109 SDCCAG3Q96C92 435 aa11.14□□□□□ -0.63
PRPF4B-206ENST00000481109 COX4I2Q96KJ9 171 aa11.14□□□□□ -0.63
PRPF4B-206ENST00000481109 UNKQ9C0B0 810 aaKnown RBP11.14□□□□□ -0.63
PRPF4B-206ENST00000481109 METTL5Q9NRN9 209 aaKnown RBP11.14□□□□□ -0.63
PRPF4B-206ENST00000481109 NOVA2Q9UNW9 492 aaKnown RBP11.14□□□□□ -0.63
PRPF4B-206ENST00000481109 HPSEQ9Y251 543 aa11.14□□□□□ -0.63
PRPF4B-206ENST00000481109 ARL2BPQ9Y2Y0 163 aa11.14□□□□□ -0.63
PRPF4B-206ENST00000481109 MLH3Q9UHC1 1453 aa11.14□□□□□ -0.63
PRPF4B-206ENST00000481109 ANKRD34BA5PLL1 514 aa11.14□□□□□ -0.63
PRPF4B-206ENST00000481109 ERVV-2B6SEH9 535 aa11.14□□□□□ -0.63
PRPF4B-206ENST00000481109 PIK3CDO00329 1044 aa11.14□□□□□ -0.63
PRPF4B-206ENST00000481109 HMOX2P30519 316 aa11.14□□□□□ -0.63
PRPF4B-206ENST00000481109 FXR1P51114 621 aaKnown RBP eCLIP11.14□□□□□ -0.63
PRPF4B-206ENST00000481109 MAGOHP61326 146 aaKnown RBP11.14□□□□□ -0.63
PRPF4B-206ENST00000481109 DR1Q01658 176 aa11.14□□□□□ -0.63
PRPF4B-206ENST00000481109 RRS1Q15050 365 aaKnown RBP11.14□□□□□ -0.63
PRPF4B-206ENST00000481109 STK38Q15208 465 aa11.14□□□□□ -0.63
PRPF4B-206ENST00000481109 VASH1Q7L8A9 365 aaPredicted RBP11.14□□□□□ -0.63
PRPF4B-206ENST00000481109 OSTM1Q86WC4 334 aa11.14□□□□□ -0.63
PRPF4B-206ENST00000481109 SFR1Q86XK3 245 aa11.14□□□□□ -0.63
PRPF4B-206ENST00000481109 NELFCDQ8IXH7 590 aa11.14□□□□□ -0.63
PRPF4B-206ENST00000481109 TSPYL6Q8N831 410 aa11.14□□□□□ -0.63
PRPF4B-206ENST00000481109 MAGOHBQ96A72 148 aaKnown RBP11.14□□□□□ -0.63
PRPF4B-206ENST00000481109 STK33Q9BYT3 514 aa11.14□□□□□ -0.63
PRPF4B-206ENST00000481109 ETNK1Q9HBU6 452 aa11.14□□□□□ -0.63
PRPF4B-206ENST00000481109 STX8Q9UNK0 236 aa11.14□□□□□ -0.63
PRPF4B-206ENST00000481109 NOSIPQ9Y314 301 aaKnown RBP11.14□□□□□ -0.63
PRPF4B-206ENST00000481109 SQORQ9Y6N5 450 aa11.14□□□□□ -0.63
PRPF4B-206ENST00000481109 CDC42BPGQ6DT37 1551 aa11.14□□□□□ -0.63
PRPF4B-206ENST00000481109 MAP3K15Q6ZN16 1313 aa11.14□□□□□ -0.63
PRPF4B-206ENST00000481109 LRRC7Q96NW7 1537 aa11.14□□□□□ -0.63
PRPF4B-206ENST00000481109 FYB1O15117 783 aa11.13□□□□□ -0.63
PRPF4B-206ENST00000481109 SPTLC2O15270 562 aa11.13□□□□□ -0.63
PRPF4B-206ENST00000481109 ADCY3O60266 1144 aa11.13□□□□□ -0.63
PRPF4B-206ENST00000481109 PHBP35232 272 aa11.13□□□□□ -0.63
PRPF4B-206ENST00000481109 PAFAH1B1P43034 410 aa11.13□□□□□ -0.63
PRPF4B-206ENST00000481109 MMP13P45452 471 aa11.13□□□□□ -0.63
PRPF4B-206ENST00000481109 RXRGP48443 463 aa11.13□□□□□ -0.63
PRPF4B-206ENST00000481109 HSD17B4P51659 736 aa11.13□□□□□ -0.63
PRPF4B-206ENST00000481109 MAP3K10Q02779 954 aa11.13□□□□□ -0.63
PRPF4B-206ENST00000481109 C15orf59Q2T9L4 293 aaPredicted RBP11.13□□□□□ -0.63
PRPF4B-206ENST00000481109 LRRC74BQ6ZQY2 392 aa11.13□□□□□ -0.63
PRPF4B-206ENST00000481109 MIGA2Q7L4E1 593 aa11.13□□□□□ -0.63
PRPF4B-206ENST00000481109 WAPLQ7Z5K2 1190 aa11.13□□□□□ -0.63
PRPF4B-206ENST00000481109 ILDR1Q86SU0 546 aaPredicted RBP11.13□□□□□ -0.63
PRPF4B-206ENST00000481109 ARHGAP24Q8N264 748 aa11.13□□□□□ -0.63
PRPF4B-206ENST00000481109 SLC17A8Q8NDX2 589 aa11.13□□□□□ -0.63
PRPF4B-206ENST00000481109 TBC1D16Q8TBP0 767 aa11.13□□□□□ -0.63
PRPF4B-206ENST00000481109 HSPBAP1Q96EW2 488 aa11.13□□□□□ -0.63
PRPF4B-206ENST00000481109 SPATA17Q96L03 361 aa11.13□□□□□ -0.63
PRPF4B-206ENST00000481109 MEIS3Q99687 375 aa11.13□□□□□ -0.63
PRPF4B-206ENST00000481109 ZNF212Q9UDV6 495 aa11.13□□□□□ -0.63
PRPF4B-206ENST00000481109 TRIM10Q9UDY6 481 aa11.13□□□□□ -0.63
PRPF4B-206ENST00000481109 ARIH1Q9Y4X5 557 aaPredicted RBP11.13□□□□□ -0.63
PRPF4B-206ENST00000481109 A0A1W2PP64 1363 aa11.13□□□□□ -0.63
PRPF4B-206ENST00000481109 HIP1O00291 1037 aa11.13□□□□□ -0.63
PRPF4B-206ENST00000481109 CHRNB1P11230 501 aa11.13□□□□□ -0.63
PRPF4B-206ENST00000481109 GNA11P29992 359 aa11.13□□□□□ -0.63
PRPF4B-206ENST00000481109 CTNNA1P35221 906 aaKnown RBP11.13□□□□□ -0.63
PRPF4B-206ENST00000481109 SYKP43405 635 aa11.13□□□□□ -0.63
PRPF4B-206ENST00000481109 EIF3BP55884 814 aaKnown RBP11.13□□□□□ -0.63
PRPF4B-206ENST00000481109 SLC34A1Q06495 639 aa11.13□□□□□ -0.63
PRPF4B-206ENST00000481109 RASGRF1Q13972 1273 aa11.13□□□□□ -0.63
PRPF4B-206ENST00000481109 TRIM29Q14134 588 aa11.13□□□□□ -0.63
PRPF4B-206ENST00000481109 GRM2Q14416 872 aa11.13□□□□□ -0.63
PRPF4B-206ENST00000481109 CCDC6Q16204 474 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms