RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 HNRNPUQ00839 825 aaKnown RBP eCLIP9.18□□□□□ -0.94
LSM5-210ENST00000480956 FOXO1Q12778 655 aa9.18□□□□□ -0.94
LSM5-210ENST00000480956 CDC16Q13042 620 aa9.18□□□□□ -0.94
LSM5-210ENST00000480956 SNX17Q15036 470 aa9.18□□□□□ -0.94
LSM5-210ENST00000480956 PTPN14Q15678 1187 aa9.18□□□□□ -0.94
LSM5-210ENST00000480956 ZC3H12AQ5D1E8 599 aaKnown RBP9.18□□□□□ -0.94
LSM5-210ENST00000480956 KDELC2Q7Z4H8 507 aa9.18□□□□□ -0.94
LSM5-210ENST00000480956 MILR1Q7Z6M3 343 aa9.18□□□□□ -0.94
LSM5-210ENST00000480956 BHMTQ93088 406 aa9.18□□□□□ -0.94
LSM5-210ENST00000480956 COA7Q96BR5 231 aa9.18□□□□□ -0.94
LSM5-210ENST00000480956 SLF1Q9BQI6 1058 aa9.18□□□□□ -0.94
LSM5-210ENST00000480956 CNPPD1Q9BV87 410 aa9.18□□□□□ -0.94
LSM5-210ENST00000480956 WNT10AQ9GZT5 417 aa9.18□□□□□ -0.94
LSM5-210ENST00000480956 PNPLA8Q9NP80 782 aa9.18□□□□□ -0.94
LSM5-210ENST00000480956 ZSWIM5Q9P217 1185 aa9.18□□□□□ -0.94
LSM5-210ENST00000480956 TJP2Q9UDY2 1190 aa9.18□□□□□ -0.94
LSM5-210ENST00000480956 DNMT3LQ9UJW3 386 aa9.18□□□□□ -0.94
LSM5-210ENST00000480956 SRPK3Q9UPE1 567 aa9.18□□□□□ -0.94
LSM5-210ENST00000480956 SPO11Q9Y5K1 396 aa9.18□□□□□ -0.94
LSM5-210ENST00000480956 CCDC66A2RUB6 948 aa9.17□□□□□ -0.94
LSM5-210ENST00000480956 H7C0S8 307 aa9.17□□□□□ -0.94
LSM5-210ENST00000480956 ACKR2O00590 384 aa9.17□□□□□ -0.94
LSM5-210ENST00000480956 USO1O60763 962 aaKnown RBP9.17□□□□□ -0.94
LSM5-210ENST00000480956 STARD3NLO95772 234 aa9.17□□□□□ -0.94
LSM5-210ENST00000480956 ATF7P17544 494 aaPredicted RBP9.17□□□□□ -0.94
LSM5-210ENST00000480956 TMF1P82094 1093 aa9.17□□□□□ -0.94
LSM5-210ENST00000480956 SMAD3P84022 425 aaKnown RBP9.17□□□□□ -0.94
LSM5-210ENST00000480956 SMAD2Q15796 467 aaKnown RBP9.17□□□□□ -0.94
LSM5-210ENST00000480956 PKN2Q16513 984 aaKnown RBP9.17□□□□□ -0.94
LSM5-210ENST00000480956 TOR2AQ5JU69 321 aa9.17□□□□□ -0.94
LSM5-210ENST00000480956 NOL9Q5SY16 702 aaKnown RBP9.17□□□□□ -0.94
LSM5-210ENST00000480956 HAUS3Q68CZ6 603 aa9.17□□□□□ -0.94
LSM5-210ENST00000480956 JMJD6Q6NYC1 403 aaPredicted RBP9.17□□□□□ -0.94
LSM5-210ENST00000480956 RASGRP2Q7LDG7 609 aa9.17□□□□□ -0.94
LSM5-210ENST00000480956 CATSPER4Q7RTX7 472 aa9.17□□□□□ -0.94
LSM5-210ENST00000480956 COL23A1Q86Y22 540 aaPredicted RBP9.17□□□□□ -0.94
LSM5-210ENST00000480956 PPIL6Q8IXY8 311 aa9.17□□□□□ -0.94
LSM5-210ENST00000480956 THEMISQ8N1K5 641 aaPredicted RBP9.17□□□□□ -0.94
LSM5-210ENST00000480956 CISD2Q8N5K1 135 aaKnown RBP9.17□□□□□ -0.94
LSM5-210ENST00000480956 BAHD1Q8TBE0 780 aaPredicted RBP9.17□□□□□ -0.94
LSM5-210ENST00000480956 RRP36Q96EU6 259 aaKnown RBP9.17□□□□□ -0.94
LSM5-210ENST00000480956 MAELQ96JY0 434 aaKnown RBP9.17□□□□□ -0.94
LSM5-210ENST00000480956 PYM1Q9BRP8 204 aaKnown RBP9.17□□□□□ -0.94
LSM5-210ENST00000480956 ADAM19Q9H013 955 aa9.17□□□□□ -0.94
LSM5-210ENST00000480956 KIAA1683Q9H0B3 1180 aa9.17□□□□□ -0.94
LSM5-210ENST00000480956 PDRG1Q9NUG6 133 aa9.17□□□□□ -0.94
LSM5-210ENST00000480956 ORC3Q9UBD5 711 aaPredicted RBP9.17□□□□□ -0.94
LSM5-210ENST00000480956 GPR55Q9Y2T6 319 aaPredicted RBP9.17□□□□□ -0.94
LSM5-210ENST00000480956 USP19O94966 1318 aa9.17□□□□□ -0.94
LSM5-210ENST00000480956 GOLGA6L3A6NEY3 463 aa9.17□□□□□ -0.94
LSM5-210ENST00000480956 FAM177BA6PVY3 158 aa9.17□□□□□ -0.94
LSM5-210ENST00000480956 APOL1O14791 398 aa9.17□□□□□ -0.94
LSM5-210ENST00000480956 EFSO43281 561 aa9.17□□□□□ -0.94
LSM5-210ENST00000480956 MAFO75444 373 aaPredicted RBP9.17□□□□□ -0.94
LSM5-210ENST00000480956 PAPLNO95428 1278 aa9.17□□□□□ -0.94
LSM5-210ENST00000480956 HSPA4LO95757 839 aa9.17□□□□□ -0.94
LSM5-210ENST00000480956 FAM157BP0CG42 384 aa9.17□□□□□ -0.94
LSM5-210ENST00000480956 ALOX12P18054 663 aa9.17□□□□□ -0.94
LSM5-210ENST00000480956 PAPOLAP51003 745 aaKnown RBP9.17□□□□□ -0.94
LSM5-210ENST00000480956 AUHQ13825 339 aaKnown RBP9.17□□□□□ -0.94
LSM5-210ENST00000480956 FAM110CQ1W6H9 321 aa9.17□□□□□ -0.94
LSM5-210ENST00000480956 ZNF787Q6DD87 383 aa9.17□□□□□ -0.94
LSM5-210ENST00000480956 ANKRD13BQ86YJ7 626 aa9.17□□□□□ -0.94
LSM5-210ENST00000480956 SIAH1Q8IUQ4 282 aa9.17□□□□□ -0.94
LSM5-210ENST00000480956 HTRA1Q92743 480 aa9.17□□□□□ -0.94
LSM5-210ENST00000480956 SPATA17Q96L03 361 aa9.17□□□□□ -0.94
LSM5-210ENST00000480956 C22orf23Q9BZE7 217 aa9.17□□□□□ -0.94
LSM5-210ENST00000480956 CCDC86Q9H6F5 360 aaKnown RBP9.17□□□□□ -0.94
LSM5-210ENST00000480956 PICK1Q9NRD5 415 aa9.17□□□□□ -0.94
LSM5-210ENST00000480956 TOMM22Q9NS69 142 aa9.17□□□□□ -0.94
LSM5-210ENST00000480956 CSADQ9Y600 493 aa9.17□□□□□ -0.94
LSM5-210ENST00000480956 GSTA4O15217 222 aa9.16□□□□□ -0.94
LSM5-210ENST00000480956 DOK2O60496 412 aa9.16□□□□□ -0.94
LSM5-210ENST00000480956 KRT37O76014 449 aa9.16□□□□□ -0.94
LSM5-210ENST00000480956 HARSP12081 509 aaKnown RBP9.16□□□□□ -0.94
LSM5-210ENST00000480956 KCNA2P16389 499 aa9.16□□□□□ -0.94
LSM5-210ENST00000480956 SLC9A1P19634 815 aa9.16□□□□□ -0.94
LSM5-210ENST00000480956 CEBPAP49715 358 aaPredicted RBP9.16□□□□□ -0.94
LSM5-210ENST00000480956 ST5P78524 1137 aa9.16□□□□□ -0.94
LSM5-210ENST00000480956 TRPC3Q13507 836 aa9.16□□□□□ -0.94
LSM5-210ENST00000480956 FRMD7Q6ZUT3 714 aa9.16□□□□□ -0.94
LSM5-210ENST00000480956 CARNMT1Q8N4J0 409 aa9.16□□□□□ -0.94
LSM5-210ENST00000480956 KREMEN2Q8NCW0 462 aa9.16□□□□□ -0.94
LSM5-210ENST00000480956 CORO1BQ9BR76 489 aa9.16□□□□□ -0.94
LSM5-210ENST00000480956 DIAPH3Q9NSV4 1193 aa9.16□□□□□ -0.94
LSM5-210ENST00000480956 MTRRQ9UBK8 725 aa9.16□□□□□ -0.94
LSM5-210ENST00000480956 ZHX1Q9UKY1 873 aaPredicted RBP9.16□□□□□ -0.94
LSM5-210ENST00000480956 DENND2AQ9ULE3 1009 aa9.16□□□□□ -0.94
LSM5-210ENST00000480956 SOS1Q07889 1333 aaPredicted RBP9.15□□□□□ -0.94
LSM5-210ENST00000480956 C11orf95C9JLR9 678 aaPredicted RBP9.15□□□□□ -0.94
LSM5-210ENST00000480956 IL12RB1P42701 662 aa9.15□□□□□ -0.94
LSM5-210ENST00000480956 TNNT3P45378 269 aaPredicted RBP9.15□□□□□ -0.94
LSM5-210ENST00000480956 TLE2Q04725 743 aa9.15□□□□□ -0.94
LSM5-210ENST00000480956 SPEM2Q0P670 501 aa9.15□□□□□ -0.94
LSM5-210ENST00000480956 LRP8Q14114 963 aa9.15□□□□□ -0.94
LSM5-210ENST00000480956 SCARF1Q14162 830 aa9.15□□□□□ -0.94
LSM5-210ENST00000480956 ZNF174Q15697 407 aa9.15□□□□□ -0.94
LSM5-210ENST00000480956 LMBR1LQ6UX01 489 aa9.15□□□□□ -0.94
LSM5-210ENST00000480956 OTOP1Q7RTM1 612 aa9.15□□□□□ -0.94
LSM5-210ENST00000480956 GALNTL5Q7Z4T8 443 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms