RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 KLRC1P26715 233 aa13.68□□□□□ -0.22
TRA2B-212ENST00000480461 YWHABP31946 246 aaKnown RBP13.68□□□□□ -0.22
TRA2B-212ENST00000480461 IGBP1P78318 339 aa13.68□□□□□ -0.22
TRA2B-212ENST00000480461 PPFIA1Q13136 1202 aa13.68□□□□□ -0.22
TRA2B-212ENST00000480461 MKRN4PQ13434 485 aaPredicted RBP13.68□□□□□ -0.22
TRA2B-212ENST00000480461 CCDC85BQ15834 202 aaPredicted RBP13.68□□□□□ -0.22
TRA2B-212ENST00000480461 PTGISQ16647 500 aa13.68□□□□□ -0.22
TRA2B-212ENST00000480461 TMEM240Q5SV17 173 aa13.68□□□□□ -0.22
TRA2B-212ENST00000480461 HYIQ5T013 277 aa13.68□□□□□ -0.22
TRA2B-212ENST00000480461 MFSD5Q6N075 450 aa13.68□□□□□ -0.22
TRA2B-212ENST00000480461 RUFY4Q6ZNE9 571 aa13.68□□□□□ -0.22
TRA2B-212ENST00000480461 C16orf59Q7L2K0 433 aa13.68□□□□□ -0.22
TRA2B-212ENST00000480461 SNX29Q8TEQ0 813 aa13.68□□□□□ -0.22
TRA2B-212ENST00000480461 AK8Q96MA6 479 aa13.68□□□□□ -0.22
TRA2B-212ENST00000480461 NECAB3Q96P71 396 aaPredicted RBP13.68□□□□□ -0.22
TRA2B-212ENST00000480461 C1QTNF1Q9BXJ1 281 aa13.68□□□□□ -0.22
TRA2B-212ENST00000480461 PANK2Q9BZ23 570 aa13.68□□□□□ -0.22
TRA2B-212ENST00000480461 CCSER1Q9C0I3 900 aa13.68□□□□□ -0.22
TRA2B-212ENST00000480461 NRBP2Q9NSY0 501 aa13.68□□□□□ -0.22
TRA2B-212ENST00000480461 KIAA1024Q9UPX6 916 aa13.68□□□□□ -0.22
TRA2B-212ENST00000480461 ATP6V1DQ9Y5K8 247 aa13.68□□□□□ -0.22
TRA2B-212ENST00000480461 C17orf102A2RUQ5 167 aa13.67□□□□□ -0.22
TRA2B-212ENST00000480461 DCDC2CA8MYV0 355 aa13.67□□□□□ -0.22
TRA2B-212ENST00000480461 E9PMD0 336 aa13.67□□□□□ -0.22
TRA2B-212ENST00000480461 CUTAO60888 179 aa13.67□□□□□ -0.22
TRA2B-212ENST00000480461 ME1P48163 572 aa13.67□□□□□ -0.22
TRA2B-212ENST00000480461 KARSQ15046 597 aaKnown RBP13.67□□□□□ -0.22
TRA2B-212ENST00000480461 TRIM71Q2Q1W2 868 aaKnown RBP13.67□□□□□ -0.22
TRA2B-212ENST00000480461 ZNF484Q5JVG2 852 aa13.67□□□□□ -0.22
TRA2B-212ENST00000480461 KRT79Q5XKE5 535 aa13.67□□□□□ -0.22
TRA2B-212ENST00000480461 MTHFD1LQ6UB35 978 aa13.67□□□□□ -0.22
TRA2B-212ENST00000480461 CABP7Q86V35 215 aa13.67□□□□□ -0.22
TRA2B-212ENST00000480461 NEK9Q8TD19 979 aa13.67□□□□□ -0.22
TRA2B-212ENST00000480461 KCNG4Q8TDN1 519 aa13.67□□□□□ -0.22
TRA2B-212ENST00000480461 SPATA32Q96LK8 384 aa13.67□□□□□ -0.22
TRA2B-212ENST00000480461 OSBPL7Q9BZF2 842 aa13.67□□□□□ -0.22
TRA2B-212ENST00000480461 DDX19AQ9NUU7 478 aaKnown RBP13.67□□□□□ -0.22
TRA2B-212ENST00000480461 RRN3P2A6NIE6 340 aa13.66□□□□□ -0.22
TRA2B-212ENST00000480461 C22orf31O95567 290 aa13.66□□□□□ -0.22
TRA2B-212ENST00000480461 XRCC6P12956 609 aaKnown RBP eCLIP13.66□□□□□ -0.22
TRA2B-212ENST00000480461 CSF2RAP15509 400 aa13.66□□□□□ -0.22
TRA2B-212ENST00000480461 IGFBP4P22692 258 aa13.66□□□□□ -0.22
TRA2B-212ENST00000480461 UBA7P41226 1012 aa13.66□□□□□ -0.22
TRA2B-212ENST00000480461 RARRES1P49788 294 aa13.66□□□□□ -0.22
TRA2B-212ENST00000480461 PPIGQ13427 754 aaKnown RBP eCLIP13.66□□□□□ -0.22
TRA2B-212ENST00000480461 DRP2Q13474 957 aa13.66□□□□□ -0.22
TRA2B-212ENST00000480461 ZRSR1Q15695 479 aaKnown RBP13.66□□□□□ -0.22
TRA2B-212ENST00000480461 MTERF2Q49AM1 385 aa13.66□□□□□ -0.22
TRA2B-212ENST00000480461 TMEM119Q4V9L6 283 aa13.66□□□□□ -0.22
TRA2B-212ENST00000480461 SERINC5Q86VE9 423 aa13.66□□□□□ -0.22
TRA2B-212ENST00000480461 KIAA0319LQ8IZA0 1049 aa13.66□□□□□ -0.22
TRA2B-212ENST00000480461 LINC01465Q8N7H1 131 aa13.66□□□□□ -0.22
TRA2B-212ENST00000480461 ERMNQ8TAM6 284 aa13.66□□□□□ -0.22
TRA2B-212ENST00000480461 NACC1Q96RE7 527 aa13.66□□□□□ -0.22
TRA2B-212ENST00000480461 SEZ6LQ9BYH1 1024 aa13.66□□□□□ -0.22
TRA2B-212ENST00000480461 RAB34Q9BZG1 259 aa13.66□□□□□ -0.22
TRA2B-212ENST00000480461 SCAND2PQ9GZW5 306 aaPredicted RBP13.66□□□□□ -0.22
TRA2B-212ENST00000480461 CYP26B1Q9NR63 512 aa13.66□□□□□ -0.22
TRA2B-212ENST00000480461 ANKEF1Q9NU02 776 aa13.66□□□□□ -0.22
TRA2B-212ENST00000480461 BLOC1S4Q9NUP1 217 aa13.66□□□□□ -0.22
TRA2B-212ENST00000480461 CXXC1Q9P0U4 656 aaPredicted RBP13.66□□□□□ -0.22
TRA2B-212ENST00000480461 SEPT9Q9UHD8 586 aaPredicted RBP13.66□□□□□ -0.22
TRA2B-212ENST00000480461 ARIH1Q9Y4X5 557 aaPredicted RBP13.66□□□□□ -0.22
TRA2B-212ENST00000480461 MYH15Q9Y2K3 1946 aa13.66□□□□□ -0.22
TRA2B-212ENST00000480461 UMODL1Q5DID0 1318 aa13.65□□□□□ -0.22
TRA2B-212ENST00000480461 IGKV6-21A0A0C4DH24 114 aa13.65□□□□□ -0.22
TRA2B-212ENST00000480461 MUTP22033 750 aa13.65□□□□□ -0.22
TRA2B-212ENST00000480461 GPNMBQ14956 572 aa13.65□□□□□ -0.22
TRA2B-212ENST00000480461 NAALADL2Q58DX5 795 aa13.65□□□□□ -0.22
TRA2B-212ENST00000480461 XKR9Q5GH70 373 aa13.65□□□□□ -0.22
TRA2B-212ENST00000480461 RESP18Q5W5W9 173 aa13.65□□□□□ -0.22
TRA2B-212ENST00000480461 ADALQ6DHV7 355 aa13.65□□□□□ -0.22
TRA2B-212ENST00000480461 PSRC1Q6PGN9 363 aaPredicted RBP13.65□□□□□ -0.22
TRA2B-212ENST00000480461 TRAF7Q6Q0C0 670 aa13.65□□□□□ -0.22
TRA2B-212ENST00000480461 CLEC17AQ6ZS10 378 aa13.65□□□□□ -0.22
TRA2B-212ENST00000480461 FAM167AQ96KS9 214 aa13.65□□□□□ -0.22
TRA2B-212ENST00000480461 CEP170P1Q96L14 293 aa13.65□□□□□ -0.22
TRA2B-212ENST00000480461 POLD4Q9HCU8 107 aa13.65□□□□□ -0.22
TRA2B-212ENST00000480461 DBR1Q9UK59 544 aaKnown RBP13.65□□□□□ -0.22
TRA2B-212ENST00000480461 PCDHA2Q9Y5H9 948 aa13.65□□□□□ -0.22
TRA2B-212ENST00000480461 GBF1Q92538 1859 aa13.65□□□□□ -0.22
TRA2B-212ENST00000480461 WDR81Q562E7 1941 aa13.64□□□□□ -0.23
TRA2B-212ENST00000480461 MYO9BQ13459 2157 aa13.64□□□□□ -0.23
TRA2B-212ENST00000480461 TCF20Q9UGU0 1960 aaKnown RBP13.64□□□□□ -0.23
TRA2B-212ENST00000480461 DKC1O60832 514 aaKnown RBP eCLIP13.64□□□□□ -0.23
TRA2B-212ENST00000480461 MAFO75444 373 aaPredicted RBP13.64□□□□□ -0.23
TRA2B-212ENST00000480461 ACRP10323 421 aa13.64□□□□□ -0.23
TRA2B-212ENST00000480461 BMP1P13497 986 aa13.64□□□□□ -0.23
TRA2B-212ENST00000480461 PLCG1P19174 1290 aa13.64□□□□□ -0.23
TRA2B-212ENST00000480461 TFF2Q03403 129 aa13.64□□□□□ -0.23
TRA2B-212ENST00000480461 PTK7Q13308 1070 aa13.64□□□□□ -0.23
TRA2B-212ENST00000480461 RAB30Q15771 203 aa13.64□□□□□ -0.23
TRA2B-212ENST00000480461 HAUS3Q68CZ6 603 aa13.64□□□□□ -0.23
TRA2B-212ENST00000480461 EFCAB12Q6NXP0 572 aa13.64□□□□□ -0.23
TRA2B-212ENST00000480461 ZNF365Q70YC5 407 aa13.64□□□□□ -0.23
TRA2B-212ENST00000480461 OTUD6AQ7L8S5 288 aa13.64□□□□□ -0.23
TRA2B-212ENST00000480461 DNAJB3Q8WWF6 145 aa13.64□□□□□ -0.23
TRA2B-212ENST00000480461 VWCEQ96DN2 955 aa13.64□□□□□ -0.23
TRA2B-212ENST00000480461 NOC4LQ9BVI4 516 aaKnown RBP13.64□□□□□ -0.23
TRA2B-212ENST00000480461 NKX2-4Q9H2Z4 354 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms