RNA–Protein interactions for RNA: ENST00000480171.7

PKP4-210, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-210ENST00000480171 MYH4Q9Y623 1939 aa9.46□□□□□ -0.89
PKP4-210ENST00000480171 E7EVH7 732 aa9.46□□□□□ -0.9
PKP4-210ENST00000480171 ONECUT3O60422 494 aaPredicted RBP9.46□□□□□ -0.9
PKP4-210ENST00000480171 FOSP01100 380 aaPredicted RBP9.46□□□□□ -0.9
PKP4-210ENST00000480171 SCP2P22307 547 aa9.46□□□□□ -0.9
PKP4-210ENST00000480171 GUCY2CP25092 1073 aa9.46□□□□□ -0.9
PKP4-210ENST00000480171 HPDP32754 393 aaPredicted RBP9.46□□□□□ -0.9
PKP4-210ENST00000480171 CASP5P51878 434 aa9.46□□□□□ -0.9
PKP4-210ENST00000480171 ARHGAP4P98171 946 aa9.46□□□□□ -0.9
PKP4-210ENST00000480171 PPP2R5EQ16537 467 aa9.46□□□□□ -0.9
PKP4-210ENST00000480171 PRR16Q569H4 304 aa9.46□□□□□ -0.9
PKP4-210ENST00000480171 RNF187Q5TA31 235 aaPredicted RBP9.46□□□□□ -0.9
PKP4-210ENST00000480171 AGBL2Q5U5Z8 902 aa9.46□□□□□ -0.9
PKP4-210ENST00000480171 ZNF280DQ6N043 979 aa9.46□□□□□ -0.9
PKP4-210ENST00000480171 SLFN11Q7Z7L1 901 aa9.46□□□□□ -0.9
PKP4-210ENST00000480171 DAAM2Q86T65 1068 aa9.46□□□□□ -0.9
PKP4-210ENST00000480171 RASGEF1CQ8N431 466 aa9.46□□□□□ -0.9
PKP4-210ENST00000480171 C3orf20Q8ND61 904 aa9.46□□□□□ -0.9
PKP4-210ENST00000480171 MYCBPAPQ8TBZ2 947 aa9.46□□□□□ -0.9
PKP4-210ENST00000480171 U2AF1L4Q8WU68 220 aaKnown RBP9.46□□□□□ -0.9
PKP4-210ENST00000480171 UBLCP1Q8WVY7 318 aaPredicted RBP9.46□□□□□ -0.9
PKP4-210ENST00000480171 REEP2Q9BRK0 252 aa9.46□□□□□ -0.9
PKP4-210ENST00000480171 TMX4Q9H1E5 349 aaPredicted RBP9.46□□□□□ -0.9
PKP4-210ENST00000480171 GCNT4Q9P109 453 aa9.46□□□□□ -0.9
PKP4-210ENST00000480171 POLLQ9UGP5 575 aa9.46□□□□□ -0.9
PKP4-210ENST00000480171 DIS3Q9Y2L1 958 aaKnown RBP9.46□□□□□ -0.9
PKP4-210ENST00000480171 UTP11Q9Y3A2 253 aaKnown RBP9.46□□□□□ -0.9
PKP4-210ENST00000480171 ARFGEF1Q9Y6D6 1849 aa9.46□□□□□ -0.9
PKP4-210ENST00000480171 SPDYE3A6NKU9 549 aa9.46□□□□□ -0.9
PKP4-210ENST00000480171 F8W031 263 aaPredicted RBP9.46□□□□□ -0.9
PKP4-210ENST00000480171 FSBPO95073 299 aa9.46□□□□□ -0.9
PKP4-210ENST00000480171 GCNT3O95395 438 aa9.46□□□□□ -0.9
PKP4-210ENST00000480171 CCDC172P0C7W6 258 aa9.46□□□□□ -0.9
PKP4-210ENST00000480171 GAP43P17677 238 aa9.46□□□□□ -0.9
PKP4-210ENST00000480171 LMNB1P20700 586 aa9.46□□□□□ -0.9
PKP4-210ENST00000480171 CLUL1Q15846 466 aa9.46□□□□□ -0.9
PKP4-210ENST00000480171 VPS72Q15906 364 aa9.46□□□□□ -0.9
PKP4-210ENST00000480171 BMT2Q1RMZ1 405 aa9.46□□□□□ -0.9
PKP4-210ENST00000480171 Q4G0T1 1027 aa9.46□□□□□ -0.9
PKP4-210ENST00000480171 DPY19L2P1Q6NXN4 242 aa9.46□□□□□ -0.9
PKP4-210ENST00000480171 AMIGO3Q86WK7 504 aa9.46□□□□□ -0.9
PKP4-210ENST00000480171 SDR16C5Q8N3Y7 309 aa9.46□□□□□ -0.9
PKP4-210ENST00000480171 COA1Q9GZY4 146 aa9.46□□□□□ -0.9
PKP4-210ENST00000480171 DDX47Q9H0S4 455 aaKnown RBP9.46□□□□□ -0.9
PKP4-210ENST00000480171 DDX4Q9NQI0 724 aaKnown RBP9.46□□□□□ -0.9
PKP4-210ENST00000480171 BTAF1O14981 1849 aa9.45□□□□□ -0.9
PKP4-210ENST00000480171 MEIS1O00470 390 aa9.45□□□□□ -0.9
PKP4-210ENST00000480171 SH3BP5O60239 455 aa9.45□□□□□ -0.9
PKP4-210ENST00000480171 AKAP3O75969 853 aa9.45□□□□□ -0.9
PKP4-210ENST00000480171 JAM2P57087 298 aa9.45□□□□□ -0.9
PKP4-210ENST00000480171 DRP2Q13474 957 aa9.45□□□□□ -0.9
PKP4-210ENST00000480171 SLFN13Q68D06 897 aa9.45□□□□□ -0.9
PKP4-210ENST00000480171 FAM196AQ6ZSG2 479 aa9.45□□□□□ -0.9
PKP4-210ENST00000480171 ETNPPLQ8TBG4 499 aa9.45□□□□□ -0.9
PKP4-210ENST00000480171 RBM46Q8TBY0 533 aaKnown RBP9.45□□□□□ -0.9
PKP4-210ENST00000480171 CEP89Q96ST8 783 aa9.45□□□□□ -0.9
PKP4-210ENST00000480171 NAP1L3Q99457 506 aaPredicted RBP9.45□□□□□ -0.9
PKP4-210ENST00000480171 AMNQ9BXJ7 453 aa9.45□□□□□ -0.9
PKP4-210ENST00000480171 RAB17Q9H0T7 212 aa9.45□□□□□ -0.9
PKP4-210ENST00000480171 GMNCA6NCL1 334 aa9.45□□□□□ -0.9
PKP4-210ENST00000480171 BHMG1C9JSJ3 638 aaPredicted RBP9.45□□□□□ -0.9
PKP4-210ENST00000480171 SERPINB2P05120 415 aa9.45□□□□□ -0.9
PKP4-210ENST00000480171 ECHS1P30084 290 aa9.45□□□□□ -0.9
PKP4-210ENST00000480171 HNRNPH1P31943 449 aaKnown RBP9.45□□□□□ -0.9
PKP4-210ENST00000480171 PSMC6P62333 389 aa9.45□□□□□ -0.9
PKP4-210ENST00000480171 ZNF844Q08AG5 666 aa9.45□□□□□ -0.9
PKP4-210ENST00000480171 DDX42Q86XP3 938 aaKnown RBP eCLIP9.45□□□□□ -0.9
PKP4-210ENST00000480171 KAT2BQ92831 832 aa9.45□□□□□ -0.9
PKP4-210ENST00000480171 SLC35C1Q96A29 364 aa9.45□□□□□ -0.9
PKP4-210ENST00000480171 CRAMP1Q96RY5 1269 aa9.45□□□□□ -0.9
PKP4-210ENST00000480171 GOLPH3Q9H4A6 298 aa9.45□□□□□ -0.9
PKP4-210ENST00000480171 PPANQ9NQ55 473 aaKnown RBP9.45□□□□□ -0.9
PKP4-210ENST00000480171 NENFQ9UMX5 172 aa9.45□□□□□ -0.9
PKP4-210ENST00000480171 STXBP5LQ9Y2K9 1186 aa9.45□□□□□ -0.9
PKP4-210ENST00000480171 GOLGA6L10A0A0M3HER8 536 aa9.44□□□□□ -0.9
PKP4-210ENST00000480171 H0YGN5 161 aa9.44□□□□□ -0.9
PKP4-210ENST00000480171 DDX3XO00571 662 aaKnown RBP eCLIP9.44□□□□□ -0.9
PKP4-210ENST00000480171 DAPK3O43293 454 aa9.44□□□□□ -0.9
PKP4-210ENST00000480171 EYA4O95677 639 aa9.44□□□□□ -0.9
PKP4-210ENST00000480171 SPATA31C1P0DKV0 1188 aa9.44□□□□□ -0.9
PKP4-210ENST00000480171 HOXA10P31260 410 aaPredicted RBP9.44□□□□□ -0.9
PKP4-210ENST00000480171 PSMC2P35998 433 aaKnown RBP9.44□□□□□ -0.9
PKP4-210ENST00000480171 ZNF76P36508 570 aa9.44□□□□□ -0.9
PKP4-210ENST00000480171 MNAT1P51948 309 aa9.44□□□□□ -0.9
PKP4-210ENST00000480171 SEC24CP53992 1094 aa9.44□□□□□ -0.9
PKP4-210ENST00000480171 EIF3BP55884 814 aaKnown RBP9.44□□□□□ -0.9
PKP4-210ENST00000480171 PPP2R2AP63151 447 aa9.44□□□□□ -0.9
PKP4-210ENST00000480171 SPIRE1Q08AE8 756 aa9.44□□□□□ -0.9
PKP4-210ENST00000480171 PTPROQ16827 1216 aa9.44□□□□□ -0.9
PKP4-210ENST00000480171 FBXW10Q5XX13 1052 aa9.44□□□□□ -0.9
PKP4-210ENST00000480171 NT5DC3Q86UY8 548 aa9.44□□□□□ -0.9
PKP4-210ENST00000480171 FAM186BQ8IYM0 893 aa9.44□□□□□ -0.9
PKP4-210ENST00000480171 PRPF38AQ8NAV1 312 aaKnown RBP9.44□□□□□ -0.9
PKP4-210ENST00000480171 CTNNBL1Q8WYA6 563 aaPredicted RBP9.44□□□□□ -0.9
PKP4-210ENST00000480171 HES6Q96HZ4 224 aa9.44□□□□□ -0.9
PKP4-210ENST00000480171 CABS1Q96KC9 395 aa9.44□□□□□ -0.9
PKP4-210ENST00000480171 POLR3CQ9BUI4 534 aaPredicted RBP9.44□□□□□ -0.9
PKP4-210ENST00000480171 SIX2Q9NPC8 291 aa9.44□□□□□ -0.9
PKP4-210ENST00000480171 NYAP2Q9P242 653 aa9.44□□□□□ -0.9
PKP4-210ENST00000480171 AMACRQ9UHK6 382 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms