RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 NCKAP1LP55160 1127 aa12.13□□□□□ -0.47
VTI1A-204ENST00000480057 SP2Q02086 613 aa12.13□□□□□ -0.47
VTI1A-204ENST00000480057 RBL2Q08999 1139 aa12.13□□□□□ -0.47
VTI1A-204ENST00000480057 ZNF792Q3KQV3 632 aa12.13□□□□□ -0.47
VTI1A-204ENST00000480057 CCDC40Q4G0X9 1142 aa12.13□□□□□ -0.47
VTI1A-204ENST00000480057 FAM160B1Q5W0V3 765 aa12.13□□□□□ -0.47
VTI1A-204ENST00000480057 CST9Q5W186 159 aa12.13□□□□□ -0.47
VTI1A-204ENST00000480057 SWSAP1Q6NVH7 229 aa12.13□□□□□ -0.47
VTI1A-204ENST00000480057 CYFIP1Q7L576 1253 aa12.13□□□□□ -0.47
VTI1A-204ENST00000480057 HS2ST1Q7LGA3 356 aa12.13□□□□□ -0.47
VTI1A-204ENST00000480057 CREBRFQ8IUR6 639 aa12.13□□□□□ -0.47
VTI1A-204ENST00000480057 TMEM139Q8IV31 216 aa12.13□□□□□ -0.47
VTI1A-204ENST00000480057 SLC9A9Q8IVB4 645 aa12.13□□□□□ -0.47
VTI1A-204ENST00000480057 CCDC60Q8IWA6 550 aaPredicted RBP12.13□□□□□ -0.47
VTI1A-204ENST00000480057 TRIM59Q8IWR1 403 aa12.13□□□□□ -0.47
VTI1A-204ENST00000480057 C12orf56Q8IXR9 622 aa12.13□□□□□ -0.47
VTI1A-204ENST00000480057 SPIRE2Q8WWL2 714 aa12.13□□□□□ -0.47
VTI1A-204ENST00000480057 FAM167AQ96KS9 214 aa12.13□□□□□ -0.47
VTI1A-204ENST00000480057 NIFKQ9BYG3 293 aaKnown RBP12.13□□□□□ -0.47
VTI1A-204ENST00000480057 EDEM3Q9BZQ6 932 aa12.13□□□□□ -0.47
VTI1A-204ENST00000480057 ZNF302Q9NR11 478 aa12.13□□□□□ -0.47
VTI1A-204ENST00000480057 PDLIM7Q9NR12 457 aa12.13□□□□□ -0.47
VTI1A-204ENST00000480057 DDX41Q9UJV9 622 aaKnown RBP12.13□□□□□ -0.47
VTI1A-204ENST00000480057 CAPN11Q9UMQ6 739 aa12.13□□□□□ -0.47
VTI1A-204ENST00000480057 ZMYM2Q9UBW7 1377 aa12.13□□□□□ -0.47
VTI1A-204ENST00000480057 PLXNB2O15031 1838 aa12.13□□□□□ -0.47
VTI1A-204ENST00000480057 ZNFX1Q9P2E3 1918 aaKnown RBP12.13□□□□□ -0.47
VTI1A-204ENST00000480057 SFI1A8K8P3 1242 aa12.12□□□□□ -0.47
VTI1A-204ENST00000480057 H0YCG3 227 aa12.12□□□□□ -0.47
VTI1A-204ENST00000480057 TGFB1I1O43294 461 aa12.12□□□□□ -0.47
VTI1A-204ENST00000480057 LGR5O75473 907 aa12.12□□□□□ -0.47
VTI1A-204ENST00000480057 NR3C1P04150 777 aa12.12□□□□□ -0.47
VTI1A-204ENST00000480057 NMT1P30419 496 aaKnown RBP12.12□□□□□ -0.47
VTI1A-204ENST00000480057 MAPK4P31152 587 aa12.12□□□□□ -0.47
VTI1A-204ENST00000480057 RFC5P40937 340 aa12.12□□□□□ -0.47
VTI1A-204ENST00000480057 HUNKP57058 714 aa12.12□□□□□ -0.47
VTI1A-204ENST00000480057 INHBEP58166 350 aa12.12□□□□□ -0.47
VTI1A-204ENST00000480057 GTF2BQ00403 316 aa12.12□□□□□ -0.47
VTI1A-204ENST00000480057 PRKCEQ02156 737 aa12.12□□□□□ -0.47
VTI1A-204ENST00000480057 FSTL1Q12841 308 aa12.12□□□□□ -0.47
VTI1A-204ENST00000480057 IRF5Q13568 498 aa12.12□□□□□ -0.47
VTI1A-204ENST00000480057 CCDC62Q6P9F0 684 aa12.12□□□□□ -0.47
VTI1A-204ENST00000480057 EXOC8Q8IYI6 725 aa12.12□□□□□ -0.47
VTI1A-204ENST00000480057 CCAR2Q8N163 923 aaKnown RBP12.12□□□□□ -0.47
VTI1A-204ENST00000480057 SEPT1Q8WYJ6 367 aa12.12□□□□□ -0.47
VTI1A-204ENST00000480057 CEP170P1Q96L14 293 aa12.12□□□□□ -0.47
VTI1A-204ENST00000480057 ACCSQ96QU6 501 aa12.12□□□□□ -0.47
VTI1A-204ENST00000480057 NTPCRQ9BSD7 190 aaKnown RBP12.12□□□□□ -0.47
VTI1A-204ENST00000480057 GBP3Q9H0R5 595 aa12.12□□□□□ -0.47
VTI1A-204ENST00000480057 PORCNQ9H237 461 aa12.12□□□□□ -0.47
VTI1A-204ENST00000480057 EFCC1Q9HA90 598 aa12.12□□□□□ -0.47
VTI1A-204ENST00000480057 VTA1Q9NP79 307 aa12.12□□□□□ -0.47
VTI1A-204ENST00000480057 CYP26B1Q9NR63 512 aa12.12□□□□□ -0.47
VTI1A-204ENST00000480057 IVNS1ABPQ9Y6Y0 642 aa12.12□□□□□ -0.47
VTI1A-204ENST00000480057 MYH9P35579 1960 aaKnown RBP12.11□□□□□ -0.47
VTI1A-204ENST00000480057 GSTTP1A0A1W2PQM5 241 aa12.11□□□□□ -0.47
VTI1A-204ENST00000480057 RBM47A0AV96 593 aaKnown RBP12.11□□□□□ -0.47
VTI1A-204ENST00000480057 GOLGA6L9A6NEM1 432 aa12.11□□□□□ -0.47
VTI1A-204ENST00000480057 K7ENM7 598 aa12.11□□□□□ -0.47
VTI1A-204ENST00000480057 KIF2AO00139 706 aaPredicted RBP12.11□□□□□ -0.47
VTI1A-204ENST00000480057 ZSCAN12O43309 604 aa12.11□□□□□ -0.47
VTI1A-204ENST00000480057 GGPS1O95749 300 aa12.11□□□□□ -0.47
VTI1A-204ENST00000480057 OATP04181 439 aa12.11□□□□□ -0.47
VTI1A-204ENST00000480057 PGK2P07205 417 aa12.11□□□□□ -0.47
VTI1A-204ENST00000480057 EPB41P11171 864 aaKnown RBP12.11□□□□□ -0.47
VTI1A-204ENST00000480057 CASP14P31944 242 aa12.11□□□□□ -0.47
VTI1A-204ENST00000480057 SLC26A2P50443 739 aa12.11□□□□□ -0.47
VTI1A-204ENST00000480057 SMTNP53814 917 aa12.11□□□□□ -0.47
VTI1A-204ENST00000480057 ADKP55263 362 aaKnown RBP12.11□□□□□ -0.47
VTI1A-204ENST00000480057 DMP1Q13316 513 aaPredicted RBP12.11□□□□□ -0.47
VTI1A-204ENST00000480057 GRB14Q14449 540 aa12.11□□□□□ -0.47
VTI1A-204ENST00000480057 TTLL4Q14679 1199 aa12.11□□□□□ -0.47
VTI1A-204ENST00000480057 SYCP1Q15431 976 aa12.11□□□□□ -0.47
VTI1A-204ENST00000480057 CELF3Q5SZQ8 465 aaKnown RBP12.11□□□□□ -0.47
VTI1A-204ENST00000480057 UTP14CQ5TAP6 766 aaKnown RBP12.11□□□□□ -0.47
VTI1A-204ENST00000480057 WDR78Q5VTH9 848 aa12.11□□□□□ -0.47
VTI1A-204ENST00000480057 PLA2G4FQ68DD2 849 aa12.11□□□□□ -0.47
VTI1A-204ENST00000480057 MAMDC4Q6UXC1 1216 aa12.11□□□□□ -0.47
VTI1A-204ENST00000480057 RASAL3Q86YV0 1011 aa12.11□□□□□ -0.47
VTI1A-204ENST00000480057 TMTC1Q8IUR5 882 aa12.11□□□□□ -0.47
VTI1A-204ENST00000480057 MSL3Q8N5Y2 521 aaKnown RBP12.11□□□□□ -0.47
VTI1A-204ENST00000480057 ANKRD13CQ8N6S4 541 aa12.11□□□□□ -0.47
VTI1A-204ENST00000480057 SCFD2Q8WU76 684 aa12.11□□□□□ -0.47
VTI1A-204ENST00000480057 DNAJC7Q99615 494 aa12.11□□□□□ -0.47
VTI1A-204ENST00000480057 TTYH3Q9C0H2 523 aa12.11□□□□□ -0.47
VTI1A-204ENST00000480057 MLXIPQ9HAP2 919 aa12.11□□□□□ -0.47
VTI1A-204ENST00000480057 ATP6V0A4Q9HBG4 840 aa12.11□□□□□ -0.47
VTI1A-204ENST00000480057 NRBP2Q9NSY0 501 aa12.11□□□□□ -0.47
VTI1A-204ENST00000480057 DMAC2Q9NW81 257 aa12.11□□□□□ -0.47
VTI1A-204ENST00000480057 ARMCX3Q9UH62 379 aaPredicted RBP12.11□□□□□ -0.47
VTI1A-204ENST00000480057 SEPT9Q9UHD8 586 aaPredicted RBP12.11□□□□□ -0.47
VTI1A-204ENST00000480057 EXOC7Q9UPT5 735 aa12.11□□□□□ -0.47
VTI1A-204ENST00000480057 SIK3Q9Y2K2 1263 aa12.11□□□□□ -0.47
VTI1A-204ENST00000480057 LUC7L2Q9Y383 392 aaKnown RBP12.11□□□□□ -0.47
VTI1A-204ENST00000480057 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.11□□□□□ -0.47
VTI1A-204ENST00000480057 EMSYQ7Z589 1322 aa12.11□□□□□ -0.47
VTI1A-204ENST00000480057 ADGRA2Q96PE1 1338 aa12.11□□□□□ -0.47
VTI1A-204ENST00000480057 DOCK5Q9H7D0 1870 aa12.1□□□□□ -0.47
VTI1A-204ENST00000480057 PLXNA1Q9UIW2 1896 aa12.1□□□□□ -0.47
VTI1A-204ENST00000480057 PES1O00541 588 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms