RNA–Protein interactions for RNA: ENST00000479988.1

CPS1-207, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best)

Gene CPS1, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-207ENST00000479988 RIC8AQ9NPQ8 531 aa6.5□□□□□ -1.37
CPS1-207ENST00000479988 PABPN1LA6NDY0 278 aaKnown RBP6.5□□□□□ -1.37
CPS1-207ENST00000479988 FOXP2O15409 715 aa6.5□□□□□ -1.37
CPS1-207ENST00000479988 UBXN1Q04323 297 aa6.5□□□□□ -1.37
CPS1-207ENST00000479988 BTG3Q14201 252 aaPredicted RBP6.5□□□□□ -1.37
CPS1-207ENST00000479988 SYT10Q6XYQ8 523 aa6.5□□□□□ -1.37
CPS1-207ENST00000479988 SRBD1Q8N5C6 995 aaKnown RBP6.5□□□□□ -1.37
CPS1-207ENST00000479988 DAGLBQ8NCG7 672 aa6.5□□□□□ -1.37
CPS1-207ENST00000479988 NELFBQ8WX92 580 aa6.5□□□□□ -1.37
CPS1-207ENST00000479988 SPOCK2Q92563 424 aa6.5□□□□□ -1.37
CPS1-207ENST00000479988 TAAR1Q96RJ0 339 aa6.5□□□□□ -1.37
CPS1-207ENST00000479988 IFIH1Q9BYX4 1025 aaKnown RBP6.5□□□□□ -1.37
CPS1-207ENST00000479988 CTNND2Q9UQB3 1225 aa6.5□□□□□ -1.37
CPS1-207ENST00000479988 SLC26A4O43511 780 aa6.5□□□□□ -1.37
CPS1-207ENST00000479988 KRT86O43790 486 aa6.5□□□□□ -1.37
CPS1-207ENST00000479988 TADA2AO75478 443 aa6.5□□□□□ -1.37
CPS1-207ENST00000479988 CCL5P13501 91 aa6.5□□□□□ -1.37
CPS1-207ENST00000479988 GUCY1A2P33402 732 aa6.5□□□□□ -1.37
CPS1-207ENST00000479988 ACTN2P35609 894 aa6.5□□□□□ -1.37
CPS1-207ENST00000479988 RHBDL3P58872 404 aa6.5□□□□□ -1.37
CPS1-207ENST00000479988 ALCAMQ13740 583 aa6.5□□□□□ -1.37
CPS1-207ENST00000479988 MXD4Q14582 209 aaPredicted RBP6.5□□□□□ -1.37
CPS1-207ENST00000479988 ZNF568Q3ZCX4 644 aa6.5□□□□□ -1.37
CPS1-207ENST00000479988 CFAP58Q5T655 872 aa6.5□□□□□ -1.37
CPS1-207ENST00000479988 CC2D1AQ6P1N0 951 aaPredicted RBP6.5□□□□□ -1.37
CPS1-207ENST00000479988 C7orf43Q8WVR3 580 aa6.5□□□□□ -1.37
CPS1-207ENST00000479988 TAF4BQ92750 862 aa6.5□□□□□ -1.37
CPS1-207ENST00000479988 PANX2Q96RD6 677 aa6.5□□□□□ -1.37
CPS1-207ENST00000479988 SENP2Q9HC62 589 aa6.5□□□□□ -1.37
CPS1-207ENST00000479988 ENTPD7Q9NQZ7 604 aa6.5□□□□□ -1.37
CPS1-207ENST00000479988 PCDHAC2Q9Y5I4 1007 aa6.5□□□□□ -1.37
CPS1-207ENST00000479988 SNCAIPQ9Y6H5 919 aa6.5□□□□□ -1.37
CPS1-207ENST00000479988 CNTNAP5Q8WYK1 1306 aa6.49□□□□□ -1.37
CPS1-207ENST00000479988 ESYT2A0FGR8 921 aa6.49□□□□□ -1.37
CPS1-207ENST00000479988 H3BRB1 525 aa6.49□□□□□ -1.37
CPS1-207ENST00000479988 PARNO95453 639 aaKnown RBP6.49□□□□□ -1.37
CPS1-207ENST00000479988 CPB1P15086 417 aa6.49□□□□□ -1.37
CPS1-207ENST00000479988 CAPN2P17655 700 aa6.49□□□□□ -1.37
CPS1-207ENST00000479988 GTF2F1P35269 517 aaKnown RBP eCLIP6.49□□□□□ -1.37
CPS1-207ENST00000479988 EFNA5P52803 228 aa6.49□□□□□ -1.37
CPS1-207ENST00000479988 OSTNP61366 133 aa6.49□□□□□ -1.37
CPS1-207ENST00000479988 KYAT1Q16773 422 aa6.49□□□□□ -1.37
CPS1-207ENST00000479988 NOL9Q5SY16 702 aaKnown RBP6.49□□□□□ -1.37
CPS1-207ENST00000479988 CXCL17Q6UXB2 119 aa6.49□□□□□ -1.37
CPS1-207ENST00000479988 METTL16Q86W50 562 aaKnown RBP6.49□□□□□ -1.37
CPS1-207ENST00000479988 NELFCDQ8IXH7 590 aa6.49□□□□□ -1.37
CPS1-207ENST00000479988 CSGALNACT2Q8N6G5 542 aa6.49□□□□□ -1.37
CPS1-207ENST00000479988 ACCSQ96QU6 501 aa6.49□□□□□ -1.37
CPS1-207ENST00000479988 NUCKS1Q9H1E3 243 aaKnown RBP6.49□□□□□ -1.37
CPS1-207ENST00000479988 TUT1Q9H6E5 874 aaKnown RBP6.49□□□□□ -1.37
CPS1-207ENST00000479988 TMEM206Q9H813 350 aa6.49□□□□□ -1.37
CPS1-207ENST00000479988 SUCLA2Q9P2R7 463 aaPredicted RBP6.49□□□□□ -1.37
CPS1-207ENST00000479988 SLC45A1Q9Y2W3 748 aa6.49□□□□□ -1.37
CPS1-207ENST00000479988 CAPN9O14815 690 aa6.49□□□□□ -1.37
CPS1-207ENST00000479988 PPFIA4O75335 1185 aa6.49□□□□□ -1.37
CPS1-207ENST00000479988 CYP2J2P51589 502 aa6.49□□□□□ -1.37
CPS1-207ENST00000479988 TFAMQ00059 246 aaKnown RBP6.49□□□□□ -1.37
CPS1-207ENST00000479988 GOLGA8FQ08AF8 430 aa6.49□□□□□ -1.37
CPS1-207ENST00000479988 GOLGA8DPQ0D2H9 430 aa6.49□□□□□ -1.37
CPS1-207ENST00000479988 CTTNQ14247 550 aaKnown RBP6.49□□□□□ -1.37
CPS1-207ENST00000479988 KCNB1Q14721 858 aa6.49□□□□□ -1.37
CPS1-207ENST00000479988 KIAA0753Q2KHM9 967 aa6.49□□□□□ -1.37
CPS1-207ENST00000479988 MAP9Q49MG5 647 aa6.49□□□□□ -1.37
CPS1-207ENST00000479988 C17orf53Q8N3J3 647 aaPredicted RBP6.49□□□□□ -1.37
CPS1-207ENST00000479988 BEST2Q8NFU1 509 aa6.49□□□□□ -1.37
CPS1-207ENST00000479988 CAGE1Q8TC20 777 aa6.49□□□□□ -1.37
CPS1-207ENST00000479988 OXER1Q8TDS5 423 aa6.49□□□□□ -1.37
CPS1-207ENST00000479988 DDX20Q9UHI6 824 aaKnown RBP6.49□□□□□ -1.37
CPS1-207ENST00000479988 SYNGAP1Q96PV0 1343 aa6.49□□□□□ -1.37
CPS1-207ENST00000479988 COL22A1Q8NFW1 1626 aaPredicted RBP6.49□□□□□ -1.37
CPS1-207ENST00000479988 CTAGE9A4FU28 777 aa6.49□□□□□ -1.37
CPS1-207ENST00000479988 SPDYE16A6NNV3 312 aaPredicted RBP6.49□□□□□ -1.37
CPS1-207ENST00000479988 CLDN3O15551 220 aa6.49□□□□□ -1.37
CPS1-207ENST00000479988 DLATP10515 647 aaKnown RBP6.49□□□□□ -1.37
CPS1-207ENST00000479988 TCF7P36402 384 aaPredicted RBP6.49□□□□□ -1.37
CPS1-207ENST00000479988 PPP2R3AQ06190 1150 aa6.49□□□□□ -1.37
CPS1-207ENST00000479988 CKAP4Q07065 602 aaKnown RBP6.49□□□□□ -1.37
CPS1-207ENST00000479988 PTGISQ16647 500 aa6.49□□□□□ -1.37
CPS1-207ENST00000479988 TMC7Q7Z402 723 aa6.49□□□□□ -1.37
CPS1-207ENST00000479988 STAG2Q8N3U4 1231 aa6.49□□□□□ -1.37
CPS1-207ENST00000479988 MSL3Q8N5Y2 521 aaKnown RBP6.49□□□□□ -1.37
CPS1-207ENST00000479988 RDH13Q8NBN7 331 aa6.49□□□□□ -1.37
CPS1-207ENST00000479988 OR8K1Q8NGG5 319 aa6.49□□□□□ -1.37
CPS1-207ENST00000479988 HHIPL1Q96JK4 782 aa6.49□□□□□ -1.37
CPS1-207ENST00000479988 MIS12Q9H081 205 aa6.49□□□□□ -1.37
CPS1-207ENST00000479988 PARVGQ9HBI0 331 aa6.49□□□□□ -1.37
CPS1-207ENST00000479988 SAGE1Q9NXZ1 904 aa6.49□□□□□ -1.37
CPS1-207ENST00000479988 MYO1AQ9UBC5 1043 aa6.49□□□□□ -1.37
CPS1-207ENST00000479988 DOT1LQ8TEK3 1739 aa6.49□□□□□ -1.37
CPS1-207ENST00000479988 GNA14O95837 355 aa6.48□□□□□ -1.37
CPS1-207ENST00000479988 LDHAP00338 332 aaKnown RBP6.48□□□□□ -1.37
CPS1-207ENST00000479988 ITGA4P13612 1032 aa6.48□□□□□ -1.37
CPS1-207ENST00000479988 ALDH5A1P51649 535 aaPredicted RBP6.48□□□□□ -1.37
CPS1-207ENST00000479988 PSMD2Q13200 908 aa6.48□□□□□ -1.37
CPS1-207ENST00000479988 PRPF4BQ13523 1007 aaKnown RBP6.48□□□□□ -1.37
CPS1-207ENST00000479988 EPHA7Q15375 998 aa6.48□□□□□ -1.37
CPS1-207ENST00000479988 ZNF484Q5JVG2 852 aa6.48□□□□□ -1.37
CPS1-207ENST00000479988 FAM26FQ5R3K3 315 aa6.48□□□□□ -1.37
CPS1-207ENST00000479988 METTL7BQ6UX53 244 aa6.48□□□□□ -1.37
CPS1-207ENST00000479988 RNF149Q8NC42 400 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms