RNA–Protein interactions for RNA: ENST00000479625.1

GPNMB-211, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 788 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-211ENST00000479625 SENP2Q9HC62 589 aa11.16□□□□□ -0.62
GPNMB-211ENST00000479625 TYW1Q9NV66 732 aaKnown RBP11.16□□□□□ -0.62
GPNMB-211ENST00000479625 PLA2G2EQ9NZK7 142 aa11.16□□□□□ -0.62
GPNMB-211ENST00000479625 NR2E1Q9Y466 385 aa11.16□□□□□ -0.62
GPNMB-211ENST00000479625 FANCMQ8IYD8 2048 aa11.16□□□□□ -0.62
GPNMB-211ENST00000479625 FSD2A1L4K1 749 aa11.15□□□□□ -0.62
GPNMB-211ENST00000479625 M0QZ92 97 aa11.15□□□□□ -0.62
GPNMB-211ENST00000479625 FGFR1P11362 822 aa11.15□□□□□ -0.62
GPNMB-211ENST00000479625 SDSP20132 328 aa11.15□□□□□ -0.62
GPNMB-211ENST00000479625 MFAP1P55081 439 aaKnown RBP11.15□□□□□ -0.62
GPNMB-211ENST00000479625 NFX1Q12986 1120 aaKnown RBP11.15□□□□□ -0.62
GPNMB-211ENST00000479625 TSR1Q2NL82 804 aaKnown RBP11.15□□□□□ -0.62
GPNMB-211ENST00000479625 MCTP2Q6DN12 878 aa11.15□□□□□ -0.62
GPNMB-211ENST00000479625 CWC27Q6UX04 472 aaKnown RBP11.15□□□□□ -0.62
GPNMB-211ENST00000479625 FLCNQ8NFG4 579 aa11.15□□□□□ -0.62
GPNMB-211ENST00000479625 SMARCC2Q8TAQ2 1214 aa11.15□□□□□ -0.62
GPNMB-211ENST00000479625 RASGRP4Q8TDF6 673 aa11.15□□□□□ -0.62
GPNMB-211ENST00000479625 TMEM40Q8WWA1 233 aa11.15□□□□□ -0.62
GPNMB-211ENST00000479625 SEPT1Q8WYJ6 367 aa11.15□□□□□ -0.62
GPNMB-211ENST00000479625 RMDN1Q96DB5 314 aa11.15□□□□□ -0.62
GPNMB-211ENST00000479625 CELF4Q9BZC1 486 aaKnown RBP11.15□□□□□ -0.62
GPNMB-211ENST00000479625 MFSD1Q9H3U5 465 aa11.15□□□□□ -0.62
GPNMB-211ENST00000479625 ERVK-5Q9HDB9 667 aa11.15□□□□□ -0.62
GPNMB-211ENST00000479625 AAASQ9NRG9 546 aa11.15□□□□□ -0.62
GPNMB-211ENST00000479625 GINS2Q9Y248 185 aa11.15□□□□□ -0.62
GPNMB-211ENST00000479625 PCDHB7Q9Y5E2 793 aa11.15□□□□□ -0.62
GPNMB-211ENST00000479625 HCFC2Q9Y5Z7 792 aa11.15□□□□□ -0.62
GPNMB-211ENST00000479625 SQORQ9Y6N5 450 aa11.15□□□□□ -0.62
GPNMB-211ENST00000479625 NCOR2Q9Y618 2525 aa11.14□□□□□ -0.63
GPNMB-211ENST00000479625 PNMA6FA0A0J9YX94 578 aa11.14□□□□□ -0.63
GPNMB-211ENST00000479625 MEIS2O14770 477 aa11.14□□□□□ -0.63
GPNMB-211ENST00000479625 ITGB5P18084 799 aa11.14□□□□□ -0.63
GPNMB-211ENST00000479625 NT5C2P49902 561 aa11.14□□□□□ -0.63
GPNMB-211ENST00000479625 KRT76Q01546 638 aa11.14□□□□□ -0.63
GPNMB-211ENST00000479625 PLCB4Q15147 1175 aa11.14□□□□□ -0.63
GPNMB-211ENST00000479625 IMMTQ16891 758 aaKnown RBP11.14□□□□□ -0.63
GPNMB-211ENST00000479625 KANK3Q6NY19 840 aa11.14□□□□□ -0.63
GPNMB-211ENST00000479625 THSD4Q6ZMP0 1018 aa11.14□□□□□ -0.63
GPNMB-211ENST00000479625 NLRX1Q86UT6 975 aa11.14□□□□□ -0.63
GPNMB-211ENST00000479625 GIMAP8Q8ND71 665 aaPredicted RBP11.14□□□□□ -0.63
GPNMB-211ENST00000479625 MRPS27Q92552 414 aaKnown RBP11.14□□□□□ -0.63
GPNMB-211ENST00000479625 GPRASP2Q96D09 838 aa11.14□□□□□ -0.63
GPNMB-211ENST00000479625 PPP1R16BQ96T49 567 aa11.14□□□□□ -0.63
GPNMB-211ENST00000479625 ADAM2Q99965 735 aa11.14□□□□□ -0.63
GPNMB-211ENST00000479625 KRT23Q9C075 422 aa11.14□□□□□ -0.63
GPNMB-211ENST00000479625 SMARCAD1Q9H4L7 1026 aa11.14□□□□□ -0.63
GPNMB-211ENST00000479625 CDHR5Q9HBB8 845 aa11.14□□□□□ -0.63
GPNMB-211ENST00000479625 RABGEF1Q9UJ41 708 aa11.14□□□□□ -0.63
GPNMB-211ENST00000479625 NOC2LQ9Y3T9 749 aaKnown RBP11.14□□□□□ -0.63
GPNMB-211ENST00000479625 MYH9P35579 1960 aaKnown RBP11.14□□□□□ -0.63
GPNMB-211ENST00000479625 EPG5Q9HCE0 2579 aa11.14□□□□□ -0.63
GPNMB-211ENST00000479625 DENND3A2RUS2 1198 aa11.13□□□□□ -0.63
GPNMB-211ENST00000479625 C9IYK1 514 aa11.13□□□□□ -0.63
GPNMB-211ENST00000479625 PI15O43692 258 aa11.13□□□□□ -0.63
GPNMB-211ENST00000479625 KRT37O76014 449 aa11.13□□□□□ -0.63
GPNMB-211ENST00000479625 HOXB8P17481 243 aaPredicted RBP11.13□□□□□ -0.63
GPNMB-211ENST00000479625 LAG3P18627 525 aa11.13□□□□□ -0.63
GPNMB-211ENST00000479625 TRAF1Q13077 416 aa11.13□□□□□ -0.63
GPNMB-211ENST00000479625 RARS2Q5T160 578 aaKnown RBP11.13□□□□□ -0.63
GPNMB-211ENST00000479625 PDE12Q6L8Q7 609 aaKnown RBP11.13□□□□□ -0.63
GPNMB-211ENST00000479625 LRRC55Q6ZSA7 311 aa11.13□□□□□ -0.63
GPNMB-211ENST00000479625 C12orf76Q8N812 135 aaPredicted RBP11.13□□□□□ -0.63
GPNMB-211ENST00000479625 TDRD5Q8NAT2 981 aaKnown RBP11.13□□□□□ -0.63
GPNMB-211ENST00000479625 IL25Q9H293 177 aa11.13□□□□□ -0.63
GPNMB-211ENST00000479625 CNNM2Q9H8M5 875 aa11.13□□□□□ -0.63
GPNMB-211ENST00000479625 RGS18Q9NS28 235 aa11.13□□□□□ -0.63
GPNMB-211ENST00000479625 LIMD1Q9UGP4 676 aa11.13□□□□□ -0.63
GPNMB-211ENST00000479625 PCDHA2Q9Y5H9 948 aa11.13□□□□□ -0.63
GPNMB-211ENST00000479625 CACNA1BQ00975 2339 aa11.13□□□□□ -0.63
GPNMB-211ENST00000479625 KDM3AQ9Y4C1 1321 aa11.12□□□□□ -0.63
GPNMB-211ENST00000479625 PATJQ8NI35 1801 aa11.12□□□□□ -0.63
GPNMB-211ENST00000479625 EP300Q09472 2414 aaPredicted RBP11.12□□□□□ -0.63
GPNMB-211ENST00000479625 RRN3P2A6NIE6 340 aa11.12□□□□□ -0.63
GPNMB-211ENST00000479625 RPS6KA5O75582 802 aa11.12□□□□□ -0.63
GPNMB-211ENST00000479625 RPLP2P05387 115 aaKnown RBP11.12□□□□□ -0.63
GPNMB-211ENST00000479625 CLCN5P51795 746 aa11.12□□□□□ -0.63
GPNMB-211ENST00000479625 PLCB3Q01970 1234 aa11.12□□□□□ -0.63
GPNMB-211ENST00000479625 MTMR1Q13613 665 aa11.12□□□□□ -0.63
GPNMB-211ENST00000479625 ANGPT1Q15389 498 aa11.12□□□□□ -0.63
GPNMB-211ENST00000479625 UBE2SQ16763 222 aa11.12□□□□□ -0.63
GPNMB-211ENST00000479625 CES5AQ6NT32 575 aa11.12□□□□□ -0.63
GPNMB-211ENST00000479625 TMC7Q7Z402 723 aa11.12□□□□□ -0.63
GPNMB-211ENST00000479625 CCDC105Q8IYK2 499 aa11.12□□□□□ -0.63
GPNMB-211ENST00000479625 CASP10Q92851 521 aa11.12□□□□□ -0.63
GPNMB-211ENST00000479625 NECTIN4Q96NY8 510 aa11.12□□□□□ -0.63
GPNMB-211ENST00000479625 DSCC1Q9BVC3 393 aa11.12□□□□□ -0.63
GPNMB-211ENST00000479625 LNPKQ9C0E8 428 aa11.12□□□□□ -0.63
GPNMB-211ENST00000479625 ADAM7Q9H2U9 754 aa11.12□□□□□ -0.63
GPNMB-211ENST00000479625 RNF19AQ9NV58 838 aa11.12□□□□□ -0.63
GPNMB-211ENST00000479625 SEPT9Q9UHD8 586 aaPredicted RBP11.12□□□□□ -0.63
GPNMB-211ENST00000479625 LZTS1Q9Y250 596 aa11.12□□□□□ -0.63
GPNMB-211ENST00000479625 MIA3Q5JRA6 1907 aa11.11□□□□□ -0.63
GPNMB-211ENST00000479625 SMIM35A0A1B0GVV1 85 aa11.11□□□□□ -0.63
GPNMB-211ENST00000479625 NPR3P17342 541 aa11.11□□□□□ -0.63
GPNMB-211ENST00000479625 AOC1P19801 751 aa11.11□□□□□ -0.63
GPNMB-211ENST00000479625 CA8P35219 290 aa11.11□□□□□ -0.63
GPNMB-211ENST00000479625 TROAPQ12815 778 aa11.11□□□□□ -0.63
GPNMB-211ENST00000479625 TPRNQ4KMQ1 711 aa11.11□□□□□ -0.63
GPNMB-211ENST00000479625 XRRA1Q6P2D8 792 aa11.11□□□□□ -0.63
GPNMB-211ENST00000479625 MTHFD1LQ6UB35 978 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms