RNA–Protein interactions for RNA: ENST00000479576.5

CCDC13-205, Transcript of coiled-coil domain containing 13, humanhuman

TSL 3

Gene CCDC13, Length 698 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13-205ENST00000479576 C12orf42Q96LP6 360 aa7.87□□□□□ -1.15
CCDC13-205ENST00000479576 NEK1Q96PY6 1258 aa7.87□□□□□ -1.15
CCDC13-205ENST00000479576 NUP88Q99567 741 aaPredicted RBP7.87□□□□□ -1.15
CCDC13-205ENST00000479576 TMEM47Q9BQJ4 181 aa7.87□□□□□ -1.15
CCDC13-205ENST00000479576 UBAC1Q9BSL1 405 aa7.87□□□□□ -1.15
CCDC13-205ENST00000479576 SRRTQ9BXP5 876 aaKnown RBP7.87□□□□□ -1.15
CCDC13-205ENST00000479576 TRIM6Q9C030 488 aaPredicted RBP7.87□□□□□ -1.15
CCDC13-205ENST00000479576 KCNF1Q9H3M0 494 aa7.87□□□□□ -1.15
CCDC13-205ENST00000479576 VCPKMTQ9H867 229 aa7.87□□□□□ -1.15
CCDC13-205ENST00000479576 NOP53Q9NZM5 478 aaKnown RBP7.87□□□□□ -1.15
CCDC13-205ENST00000479576 TMOD4Q9NZQ9 345 aa7.87□□□□□ -1.15
CCDC13-205ENST00000479576 CNTN3Q9P232 1028 aa7.87□□□□□ -1.15
CCDC13-205ENST00000479576 CPSF2Q9P2I0 782 aaKnown RBP7.87□□□□□ -1.15
CCDC13-205ENST00000479576 CENPFP49454 3210 aa7.87□□□□□ -1.15
CCDC13-205ENST00000479576 C19orf81C9J6K1 198 aa7.86□□□□□ -1.15
CCDC13-205ENST00000479576 F5H6K3 240 aa7.86□□□□□ -1.15
CCDC13-205ENST00000479576 PDHXO00330 501 aa7.86□□□□□ -1.15
CCDC13-205ENST00000479576 SH2B2O14492 632 aaPredicted RBP7.86□□□□□ -1.15
CCDC13-205ENST00000479576 IFIT3O14879 490 aaKnown RBP7.86□□□□□ -1.15
CCDC13-205ENST00000479576 PPFIA2O75334 1257 aa7.86□□□□□ -1.15
CCDC13-205ENST00000479576 NEBLO76041 1014 aa7.86□□□□□ -1.15
CCDC13-205ENST00000479576 TOP1P11387 765 aaKnown RBP7.86□□□□□ -1.15
CCDC13-205ENST00000479576 PRPHP41219 470 aa7.86□□□□□ -1.15
CCDC13-205ENST00000479576 CD151P48509 253 aa7.86□□□□□ -1.15
CCDC13-205ENST00000479576 USP14P54578 494 aa7.86□□□□□ -1.15
CCDC13-205ENST00000479576 SOX10P56693 466 aa7.86□□□□□ -1.15
CCDC13-205ENST00000479576 EXOSC10Q01780 885 aaKnown RBP7.86□□□□□ -1.15
CCDC13-205ENST00000479576 KLRC3Q07444 240 aa7.86□□□□□ -1.15
CCDC13-205ENST00000479576 KRT32Q14532 448 aa7.86□□□□□ -1.15
CCDC13-205ENST00000479576 DHX8Q14562 1220 aaKnown RBP7.86□□□□□ -1.15
CCDC13-205ENST00000479576 TMEM67Q5HYA8 995 aa7.86□□□□□ -1.15
CCDC13-205ENST00000479576 FAM83BQ5T0W9 1011 aa7.86□□□□□ -1.15
CCDC13-205ENST00000479576 FASTKD5Q7L8L6 764 aaKnown RBP7.86□□□□□ -1.15
CCDC13-205ENST00000479576 IQCA1Q86XH1 822 aa7.86□□□□□ -1.15
CCDC13-205ENST00000479576 KCTD17Q8N5Z5 321 aa7.86□□□□□ -1.15
CCDC13-205ENST00000479576 C1orf127Q8N9H9 656 aa7.86□□□□□ -1.15
CCDC13-205ENST00000479576 IGDCC4Q8TDY8 1250 aa7.86□□□□□ -1.15
CCDC13-205ENST00000479576 ANKS1AQ92625 1134 aa7.86□□□□□ -1.15
CCDC13-205ENST00000479576 TRIM11Q96F44 468 aa7.86□□□□□ -1.15
CCDC13-205ENST00000479576 C16orf45Q96MC5 204 aaPredicted RBP7.86□□□□□ -1.15
CCDC13-205ENST00000479576 UPF3BQ9BZI7 483 aaKnown RBP7.86□□□□□ -1.15
CCDC13-205ENST00000479576 SMG9Q9H0W8 520 aaKnown RBP7.86□□□□□ -1.15
CCDC13-205ENST00000479576 R3HDMLQ9H3Y0 253 aa7.86□□□□□ -1.15
CCDC13-205ENST00000479576 SUV39H2Q9H5I1 410 aa7.86□□□□□ -1.15
CCDC13-205ENST00000479576 RPAP3Q9H6T3 665 aaPredicted RBP7.86□□□□□ -1.15
CCDC13-205ENST00000479576 SH2D4AQ9H788 454 aa7.86□□□□□ -1.15
CCDC13-205ENST00000479576 KCND1Q9NSA2 647 aa7.86□□□□□ -1.15
CCDC13-205ENST00000479576 KANSL3Q9P2N6 904 aa7.86□□□□□ -1.15
CCDC13-205ENST00000479576 ZNF215Q9UL58 517 aaPredicted RBP7.86□□□□□ -1.15
CCDC13-205ENST00000479576 AGTPBP1Q9UPW5 1226 aa7.86□□□□□ -1.15
CCDC13-205ENST00000479576 SMC3Q9UQE7 1217 aa7.86□□□□□ -1.15
CCDC13-205ENST00000479576 RPS6KL1Q9Y6S9 549 aa7.86□□□□□ -1.15
CCDC13-205ENST00000479576 SMCHD1A6NHR9 2005 aa7.85□□□□□ -1.15
CCDC13-205ENST00000479576 A0A1B0GUA9 196 aa7.85□□□□□ -1.15
CCDC13-205ENST00000479576 KINO60870 393 aaKnown RBP7.85□□□□□ -1.15
CCDC13-205ENST00000479576 PHACTR2O75167 634 aa7.85□□□□□ -1.15
CCDC13-205ENST00000479576 TRPA1O75762 1119 aa7.85□□□□□ -1.15
CCDC13-205ENST00000479576 KIF4AO95239 1232 aa7.85□□□□□ -1.15
CCDC13-205ENST00000479576 CYP2C8P10632 490 aa7.85□□□□□ -1.15
CCDC13-205ENST00000479576 NID1P14543 1247 aa7.85□□□□□ -1.15
CCDC13-205ENST00000479576 CASTP20810 708 aaKnown RBP7.85□□□□□ -1.15
CCDC13-205ENST00000479576 CES1P23141 567 aa7.85□□□□□ -1.15
CCDC13-205ENST00000479576 RPS6KB1P23443 525 aa7.85□□□□□ -1.15
CCDC13-205ENST00000479576 PAX7P23759 505 aa7.85□□□□□ -1.15
CCDC13-205ENST00000479576 OAS2P29728 719 aaKnown RBP7.85□□□□□ -1.15
CCDC13-205ENST00000479576 LMAN1P49257 510 aa7.85□□□□□ -1.15
CCDC13-205ENST00000479576 GSK3AP49840 483 aa7.85□□□□□ -1.15
CCDC13-205ENST00000479576 NT5C2P49902 561 aa7.85□□□□□ -1.15
CCDC13-205ENST00000479576 AFF1P51825 1210 aaKnown RBP7.85□□□□□ -1.15
CCDC13-205ENST00000479576 INHBEP58166 350 aa7.85□□□□□ -1.15
CCDC13-205ENST00000479576 WTAPQ15007 396 aa7.85□□□□□ -1.15
CCDC13-205ENST00000479576 PTPN14Q15678 1187 aa7.85□□□□□ -1.15
CCDC13-205ENST00000479576 IFIT1BQ5T764 474 aaKnown RBP7.85□□□□□ -1.15
CCDC13-205ENST00000479576 SLFN13Q68D06 897 aa7.85□□□□□ -1.15
CCDC13-205ENST00000479576 BLOC1S2Q6QNY1 142 aa7.85□□□□□ -1.15
CCDC13-205ENST00000479576 KIAA1328Q86T90 577 aa7.85□□□□□ -1.15
CCDC13-205ENST00000479576 NCAPG2Q86XI2 1143 aa7.85□□□□□ -1.15
CCDC13-205ENST00000479576 DGKHQ86XP1 1220 aa7.85□□□□□ -1.15
CCDC13-205ENST00000479576 RAB11FIP4Q86YS3 637 aa7.85□□□□□ -1.15
CCDC13-205ENST00000479576 GMCL1P1Q8NEA9 526 aa7.85□□□□□ -1.15
CCDC13-205ENST00000479576 PLD4Q96BZ4 506 aa7.85□□□□□ -1.15
CCDC13-205ENST00000479576 SPACA7Q96KW9 195 aa7.85□□□□□ -1.15
CCDC13-205ENST00000479576 TTC14Q96N46 770 aa7.85□□□□□ -1.15
CCDC13-205ENST00000479576 CITED4Q96RK1 184 aa7.85□□□□□ -1.15
CCDC13-205ENST00000479576 KIF2CQ99661 725 aa7.85□□□□□ -1.15
CCDC13-205ENST00000479576 ASCC2Q9H1I8 757 aaPredicted RBP7.85□□□□□ -1.15
CCDC13-205ENST00000479576 CHRDQ9H2X0 955 aa7.85□□□□□ -1.15
CCDC13-205ENST00000479576 KAT14Q9H8E8 782 aa7.85□□□□□ -1.15
CCDC13-205ENST00000479576 LY9Q9HBG7 655 aa7.85□□□□□ -1.15
CCDC13-205ENST00000479576 ST7Q9NRC1 585 aa7.85□□□□□ -1.15
CCDC13-205ENST00000479576 FBXO28Q9NVF7 368 aa7.85□□□□□ -1.15
CCDC13-205ENST00000479576 RNF186Q9NXI6 227 aa7.85□□□□□ -1.15
CCDC13-205ENST00000479576 FOXD3Q9UJU5 478 aaPredicted RBP7.85□□□□□ -1.15
CCDC13-205ENST00000479576 FRMPD2Q68DX3 1309 aaPredicted RBP7.84□□□□□ -1.15
CCDC13-205ENST00000479576 ADGRA2Q96PE1 1338 aa7.84□□□□□ -1.15
CCDC13-205ENST00000479576 A0A0G2JMZ2 1700 aa7.84□□□□□ -1.15
CCDC13-205ENST00000479576 ERICH2A1L162 156 aa7.84□□□□□ -1.15
CCDC13-205ENST00000479576 WDR46O15213 610 aaKnown RBP7.84□□□□□ -1.15
CCDC13-205ENST00000479576 POLR3GO15318 223 aaPredicted RBP7.84□□□□□ -1.15
CCDC13-205ENST00000479576 PEX10O60683 326 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms