RNA–Protein interactions for RNA: ENST00000479234.1

SCAF8-206, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 5

Gene SCAF8, Length 281 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-206ENST00000479234 USP17L11C9JVI0 530 aa6.96□□□□□ -1.3
SCAF8-206ENST00000479234 USP17L18D6R9N7 530 aa6.96□□□□□ -1.3
SCAF8-206ENST00000479234 USP17L22D6RA61 530 aa6.96□□□□□ -1.3
SCAF8-206ENST00000479234 USP17L17D6RBQ6 530 aa6.96□□□□□ -1.3
SCAF8-206ENST00000479234 USP17L19D6RCP7 530 aa6.96□□□□□ -1.3
SCAF8-206ENST00000479234 USP17L20D6RJB6 530 aa6.96□□□□□ -1.3
SCAF8-206ENST00000479234 RBAK-RBAKDNI3L0D1 243 aa6.96□□□□□ -1.3
SCAF8-206ENST00000479234 PIK3CDO00329 1044 aa6.96□□□□□ -1.3
SCAF8-206ENST00000479234 CETN3O15182 167 aa6.96□□□□□ -1.3
SCAF8-206ENST00000479234 EIF3JO75822 258 aaKnown RBP6.96□□□□□ -1.3
SCAF8-206ENST00000479234 SASH3O75995 380 aa6.96□□□□□ -1.3
SCAF8-206ENST00000479234 SERPING1P05155 500 aa6.96□□□□□ -1.3
SCAF8-206ENST00000479234 MMP10P09238 476 aa6.96□□□□□ -1.3
SCAF8-206ENST00000479234 BMP3P12645 472 aa6.96□□□□□ -1.3
SCAF8-206ENST00000479234 TCP1P17987 556 aaKnown RBP6.96□□□□□ -1.3
SCAF8-206ENST00000479234 MUTP22033 750 aa6.96□□□□□ -1.3
SCAF8-206ENST00000479234 RPA1P27694 616 aa6.96□□□□□ -1.3
SCAF8-206ENST00000479234 HSPA1LP34931 641 aa6.96□□□□□ -1.3
SCAF8-206ENST00000479234 SREBF1P36956 1147 aa6.96□□□□□ -1.3
SCAF8-206ENST00000479234 EIF4A3P38919 411 aaKnown RBP6.96□□□□□ -1.3
SCAF8-206ENST00000479234 SLC12A3P55017 1021 aa6.96□□□□□ -1.3
SCAF8-206ENST00000479234 ARHGAP4P98171 946 aa6.96□□□□□ -1.3
SCAF8-206ENST00000479234 ICA1Q05084 483 aa6.96□□□□□ -1.3
SCAF8-206ENST00000479234 USP17L24Q0WX57 530 aa6.96□□□□□ -1.3
SCAF8-206ENST00000479234 LRRC41Q15345 812 aa6.96□□□□□ -1.3
SCAF8-206ENST00000479234 ASTE1Q2TB18 679 aaPredicted RBP6.96□□□□□ -1.3
SCAF8-206ENST00000479234 MAP9Q49MG5 647 aa6.96□□□□□ -1.3
SCAF8-206ENST00000479234 SLC9C1Q4G0N8 1177 aa6.96□□□□□ -1.3
SCAF8-206ENST00000479234 CCDC40Q4G0X9 1142 aa6.96□□□□□ -1.3
SCAF8-206ENST00000479234 HERC4Q5GLZ8 1057 aaPredicted RBP6.96□□□□□ -1.3
SCAF8-206ENST00000479234 TAF3Q5VWG9 929 aa6.96□□□□□ -1.3
SCAF8-206ENST00000479234 USP17L6PQ6QN14 398 aa6.96□□□□□ -1.3
SCAF8-206ENST00000479234 RRAGAQ7L523 313 aa6.96□□□□□ -1.3
SCAF8-206ENST00000479234 ZNF572Q7Z3I7 529 aaPredicted RBP6.96□□□□□ -1.3
SCAF8-206ENST00000479234 CACNA2D4Q7Z3S7 1137 aa6.96□□□□□ -1.3
SCAF8-206ENST00000479234 FRMD5Q7Z6J6 570 aa6.96□□□□□ -1.3
SCAF8-206ENST00000479234 GPBP1Q86WP2 473 aa6.96□□□□□ -1.3
SCAF8-206ENST00000479234 CLEC10AQ8IUN9 316 aa6.96□□□□□ -1.3
SCAF8-206ENST00000479234 TRIM59Q8IWR1 403 aa6.96□□□□□ -1.3
SCAF8-206ENST00000479234 MMGT1Q8N4V1 131 aa6.96□□□□□ -1.3
SCAF8-206ENST00000479234 ETNPPLQ8TBG4 499 aa6.96□□□□□ -1.3
SCAF8-206ENST00000479234 POLR3CQ9BUI4 534 aaPredicted RBP6.96□□□□□ -1.3
SCAF8-206ENST00000479234 LACRTQ9GZZ8 138 aa6.96□□□□□ -1.3
SCAF8-206ENST00000479234 KCTD10Q9H3F6 313 aa6.96□□□□□ -1.3
SCAF8-206ENST00000479234 DEF6Q9H4E7 631 aa6.96□□□□□ -1.3
SCAF8-206ENST00000479234 ZSWIM4Q9H7M6 989 aa6.96□□□□□ -1.3
SCAF8-206ENST00000479234 DNAJC18Q9H819 358 aa6.96□□□□□ -1.3
SCAF8-206ENST00000479234 DBNDD1Q9H9R9 158 aa6.96□□□□□ -1.3
SCAF8-206ENST00000479234 ABCB6Q9NP58 842 aa6.96□□□□□ -1.3
SCAF8-206ENST00000479234 PSD3Q9NYI0 1048 aa6.96□□□□□ -1.3
SCAF8-206ENST00000479234 CEP72Q9P209 647 aa6.96□□□□□ -1.3
SCAF8-206ENST00000479234 ARHGAP20Q9P2F6 1191 aa6.96□□□□□ -1.3
SCAF8-206ENST00000479234 RNF14Q9UBS8 474 aa6.96□□□□□ -1.3
SCAF8-206ENST00000479234 TRIM10Q9UDY6 481 aa6.96□□□□□ -1.3
SCAF8-206ENST00000479234 TRAF3IP3Q9Y228 551 aa6.96□□□□□ -1.3
SCAF8-206ENST00000479234 GPSM3Q9Y4H4 160 aa6.96□□□□□ -1.3
SCAF8-206ENST00000479234 COL2A1P02458 1487 aaPredicted RBP6.96□□□□□ -1.3
SCAF8-206ENST00000479234 NRXN2Q9P2S2 1712 aa6.96□□□□□ -1.3
SCAF8-206ENST00000479234 ATRNL1Q5VV63 1379 aa6.95□□□□□ -1.3
SCAF8-206ENST00000479234 CCDC66A2RUB6 948 aa6.95□□□□□ -1.3
SCAF8-206ENST00000479234 A6NJR5 290 aa6.95□□□□□ -1.3
SCAF8-206ENST00000479234 SPDYE3A6NKU9 549 aa6.95□□□□□ -1.3
SCAF8-206ENST00000479234 E9PMD0 336 aa6.95□□□□□ -1.3
SCAF8-206ENST00000479234 PDXKO00764 312 aa6.95□□□□□ -1.3
SCAF8-206ENST00000479234 ZNF263O14978 683 aa6.95□□□□□ -1.3
SCAF8-206ENST00000479234 CALUO43852 315 aaPredicted RBP6.95□□□□□ -1.3
SCAF8-206ENST00000479234 AKR1B10O60218 316 aa6.95□□□□□ -1.3
SCAF8-206ENST00000479234 ECE2O60344 883 aa6.95□□□□□ -1.3
SCAF8-206ENST00000479234 PLA2G6O60733 806 aa6.95□□□□□ -1.3
SCAF8-206ENST00000479234 MED24O75448 989 aa6.95□□□□□ -1.3
SCAF8-206ENST00000479234 NDUFB10O96000 172 aa6.95□□□□□ -1.3
SCAF8-206ENST00000479234 PROCP04070 461 aa6.95□□□□□ -1.3
SCAF8-206ENST00000479234 ATP1A1P05023 1023 aaKnown RBP6.95□□□□□ -1.3
SCAF8-206ENST00000479234 SSBP05455 408 aaKnown RBP eCLIP6.95□□□□□ -1.3
SCAF8-206ENST00000479234 KRT18P05783 430 aaKnown RBP6.95□□□□□ -1.3
SCAF8-206ENST00000479234 RHOXF2BP0C7M4 288 aa6.95□□□□□ -1.3
SCAF8-206ENST00000479234 OAS2P29728 719 aaKnown RBP6.95□□□□□ -1.3
SCAF8-206ENST00000479234 KIF11P52732 1056 aa6.95□□□□□ -1.3
SCAF8-206ENST00000479234 RBM5P52756 815 aaKnown RBP eCLIP6.95□□□□□ -1.3
SCAF8-206ENST00000479234 TCP10Q12799 353 aa6.95□□□□□ -1.3
SCAF8-206ENST00000479234 ADAM9Q13443 819 aa6.95□□□□□ -1.3
SCAF8-206ENST00000479234 GIT2Q14161 759 aa6.95□□□□□ -1.3
SCAF8-206ENST00000479234 NFIL3Q16649 462 aa6.95□□□□□ -1.3
SCAF8-206ENST00000479234 BMT2Q1RMZ1 405 aa6.95□□□□□ -1.3
SCAF8-206ENST00000479234 ARSHQ5FYA8 562 aa6.95□□□□□ -1.3
SCAF8-206ENST00000479234 C10orf76Q5T2E6 689 aa6.95□□□□□ -1.3
SCAF8-206ENST00000479234 SFMBT2Q5VUG0 894 aa6.95□□□□□ -1.3
SCAF8-206ENST00000479234 NCAPH2Q6IBW4 605 aa6.95□□□□□ -1.3
SCAF8-206ENST00000479234 CCDC70Q6NSX1 233 aa6.95□□□□□ -1.3
SCAF8-206ENST00000479234 LYSMD3Q7Z3D4 306 aa6.95□□□□□ -1.3
SCAF8-206ENST00000479234 CATSPER3Q86XQ3 398 aa6.95□□□□□ -1.3
SCAF8-206ENST00000479234 KIAA0825Q8IV33 1275 aa6.95□□□□□ -1.3
SCAF8-206ENST00000479234 SCFD1Q8WVM8 642 aa6.95□□□□□ -1.3
SCAF8-206ENST00000479234 C7orf43Q8WVR3 580 aa6.95□□□□□ -1.3
SCAF8-206ENST00000479234 ZNF837Q96EG3 531 aaPredicted RBP6.95□□□□□ -1.3
SCAF8-206ENST00000479234 PNKPQ96T60 521 aa6.95□□□□□ -1.3
SCAF8-206ENST00000479234 RHOXF2Q9BQY4 288 aa6.95□□□□□ -1.3
SCAF8-206ENST00000479234 IFIH1Q9BYX4 1025 aaKnown RBP6.95□□□□□ -1.3
SCAF8-206ENST00000479234 TANGO6Q9C0B7 1094 aa6.95□□□□□ -1.3
SCAF8-206ENST00000479234 SH2D4AQ9H788 454 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms