RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 ATP6V0A2Q9Y487 856 aa22.95■■□□□ 1.26
SDF4-206ENST00000478938 USH1CQ9Y6N9 552 aa22.95■■□□□ 1.26
SDF4-206ENST00000478938 MAGEA13PA6NCF6 341 aa22.95■■□□□ 1.26
SDF4-206ENST00000478938 POU5F1Q01860 360 aaKnown RBP22.95■■□□□ 1.26
SDF4-206ENST00000478938 CCDC152Q4G0S7 254 aa22.95■■□□□ 1.26
SDF4-206ENST00000478938 ZNF449Q6P9G9 518 aa22.95■■□□□ 1.26
SDF4-206ENST00000478938 CEP128Q6ZU80 1094 aa22.95■■□□□ 1.26
SDF4-206ENST00000478938 TAOK1Q7L7X3 1001 aa22.95■■□□□ 1.26
SDF4-206ENST00000478938 LRRC57Q8N9N7 239 aa22.95■■□□□ 1.26
SDF4-206ENST00000478938 FBXO25Q8TCJ0 367 aa22.95■■□□□ 1.26
SDF4-206ENST00000478938 NCSTNQ92542 709 aa22.95■■□□□ 1.26
SDF4-206ENST00000478938 GATA6Q92908 595 aa22.95■■□□□ 1.26
SDF4-206ENST00000478938 CCDC97Q96F63 343 aaPredicted RBP22.95■■□□□ 1.26
SDF4-206ENST00000478938 ETNK2Q9NVF9 386 aa22.95■■□□□ 1.26
SDF4-206ENST00000478938 PKD1L3Q7Z443 1732 aa22.94■■□□□ 1.26
SDF4-206ENST00000478938 ZCCHC18P0CG32 403 aa22.94■■□□□ 1.26
SDF4-206ENST00000478938 TATP17735 454 aaPredicted RBP22.94■■□□□ 1.26
SDF4-206ENST00000478938 STOML1Q9UBI4 398 aa22.94■■□□□ 1.26
SDF4-206ENST00000478938 SNX24Q9Y343 169 aa22.94■■□□□ 1.26
SDF4-206ENST00000478938 ADAMTS13Q76LX8 1427 aa22.94■■□□□ 1.26
SDF4-206ENST00000478938 RASGRF2O14827 1237 aa22.94■■□□□ 1.26
SDF4-206ENST00000478938 ZNF189O75820 626 aaPredicted RBP22.94■■□□□ 1.26
SDF4-206ENST00000478938 CD151P48509 253 aa22.94■■□□□ 1.26
SDF4-206ENST00000478938 ASIC1P78348 528 aa22.94■■□□□ 1.26
SDF4-206ENST00000478938 KHDC1Q4VXA5 237 aaKnown RBP22.94■■□□□ 1.26
SDF4-206ENST00000478938 ABTB2Q8N961 1025 aa22.94■■□□□ 1.26
SDF4-206ENST00000478938 GLG1Q92896 1179 aa22.94■■□□□ 1.26
SDF4-206ENST00000478938 TGS1Q96RS0 853 aaKnown RBP22.94■■□□□ 1.26
SDF4-206ENST00000478938 STRBPQ96SI9 672 aaKnown RBP22.94■■□□□ 1.26
SDF4-206ENST00000478938 PDP2Q9P2J9 529 aa22.94■■□□□ 1.26
SDF4-206ENST00000478938 USP20Q9Y2K6 914 aa22.94■■□□□ 1.26
SDF4-206ENST00000478938 TMEM2Q9UHN6 1383 aa22.93■■□□□ 1.26
SDF4-206ENST00000478938 RBM47A0AV96 593 aaKnown RBP22.93■■□□□ 1.26
SDF4-206ENST00000478938 RAPGEF1Q13905 1077 aa22.93■■□□□ 1.26
SDF4-206ENST00000478938 WASHC2DQ5SRD0 308 aa22.93■■□□□ 1.26
SDF4-206ENST00000478938 FAM83BQ5T0W9 1011 aa22.93■■□□□ 1.26
SDF4-206ENST00000478938 ZNF365Q70YC5 407 aa22.93■■□□□ 1.26
SDF4-206ENST00000478938 IFNL3Q8IZI9 196 aa22.93■■□□□ 1.26
SDF4-206ENST00000478938 DCLRE1BQ9H816 532 aa22.93■■□□□ 1.26
SDF4-206ENST00000478938 CNNM2Q9H8M5 875 aa22.93■■□□□ 1.26
SDF4-206ENST00000478938 MROH7Q68CQ1 1323 aa22.93■■□□□ 1.26
SDF4-206ENST00000478938 PALM3A6NDB9 673 aaPredicted RBP22.93■■□□□ 1.26
SDF4-206ENST00000478938 MBD4O95243 580 aa22.93■■□□□ 1.26
SDF4-206ENST00000478938 POLR2FP61218 127 aaKnown RBP22.93■■□□□ 1.26
SDF4-206ENST00000478938 CERKLQ49MI3 558 aaPredicted RBP22.93■■□□□ 1.26
SDF4-206ENST00000478938 RFWD3Q6PCD5 774 aa22.93■■□□□ 1.26
SDF4-206ENST00000478938 BARGINQ6ZT62 677 aa22.93■■□□□ 1.26
SDF4-206ENST00000478938 SEPT14Q6ZU15 432 aa22.93■■□□□ 1.26
SDF4-206ENST00000478938 KIAA0895Q8NCT3 520 aa22.93■■□□□ 1.26
SDF4-206ENST00000478938 NOL4O94818 638 aa22.92■■□□□ 1.26
SDF4-206ENST00000478938 EIF4BP23588 611 aaKnown RBP22.92■■□□□ 1.26
SDF4-206ENST00000478938 CCDC15Q0P6D6 951 aa22.92■■□□□ 1.26
SDF4-206ENST00000478938 FUT2Q10981 343 aa22.92■■□□□ 1.26
SDF4-206ENST00000478938 LSAMPQ13449 338 aa22.92■■□□□ 1.26
SDF4-206ENST00000478938 TNFAIP8L3Q5GJ75 292 aa22.92■■□□□ 1.26
SDF4-206ENST00000478938 DUPD1Q68J44 220 aa22.92■■□□□ 1.26
SDF4-206ENST00000478938 ZNF790Q6PG37 636 aa22.92■■□□□ 1.26
SDF4-206ENST00000478938 VSTM1Q6UX27 236 aa22.92■■□□□ 1.26
SDF4-206ENST00000478938 ZDHHC24Q6UX98 284 aa22.92■■□□□ 1.26
SDF4-206ENST00000478938 KCNK9Q9NPC2 374 aa22.92■■□□□ 1.26
SDF4-206ENST00000478938 RTCBQ9Y3I0 505 aaKnown RBP22.92■■□□□ 1.26
SDF4-206ENST00000478938 CIAO1O76071 339 aa22.92■■□□□ 1.26
SDF4-206ENST00000478938 PCCAP05165 728 aaPredicted RBP22.92■■□□□ 1.26
SDF4-206ENST00000478938 RCN1Q15293 331 aa22.92■■□□□ 1.26
SDF4-206ENST00000478938 C4orf32Q8N8J7 132 aa22.92■■□□□ 1.26
SDF4-206ENST00000478938 FAM133AQ8N9E0 248 aa22.92■■□□□ 1.26
SDF4-206ENST00000478938 CKAP2Q8WWK9 683 aa22.92■■□□□ 1.26
SDF4-206ENST00000478938 SLC7A6OSQ96CW6 309 aaPredicted RBP22.92■■□□□ 1.26
SDF4-206ENST00000478938 CCDC85AQ96PX6 553 aaPredicted RBP22.92■■□□□ 1.26
SDF4-206ENST00000478938 IWS1Q96ST2 819 aa22.92■■□□□ 1.26
SDF4-206ENST00000478938 CUEDC2Q9H467 287 aa22.92■■□□□ 1.26
SDF4-206ENST00000478938 FGGP02679 453 aa22.91■■□□□ 1.26
SDF4-206ENST00000478938 PDE6AP16499 860 aa22.91■■□□□ 1.26
SDF4-206ENST00000478938 DR1Q01658 176 aa22.91■■□□□ 1.26
SDF4-206ENST00000478938 STMN4Q9H169 189 aaPredicted RBP22.91■■□□□ 1.26
SDF4-206ENST00000478938 BAZ2BQ9UIF8 2168 aaKnown RBP22.91■■□□□ 1.26
SDF4-206ENST00000478938 PNPLA7Q6ZV29 1317 aa22.91■■□□□ 1.26
SDF4-206ENST00000478938 RPL13P26373 211 aaKnown RBP22.91■■□□□ 1.26
SDF4-206ENST00000478938 KLHL30Q0D2K2 578 aa22.91■■□□□ 1.26
SDF4-206ENST00000478938 PEX26Q7Z412 305 aa22.91■■□□□ 1.26
SDF4-206ENST00000478938 RASGEF1CQ8N431 466 aa22.91■■□□□ 1.26
SDF4-206ENST00000478938 ERP44Q9BS26 406 aa22.91■■□□□ 1.26
SDF4-206ENST00000478938 CEP72Q9P209 647 aa22.91■■□□□ 1.26
SDF4-206ENST00000478938 SEC63Q9UGP8 760 aaKnown RBP22.91■■□□□ 1.26
SDF4-206ENST00000478938 CHMP2BQ9UQN3 213 aa22.91■■□□□ 1.26
SDF4-206ENST00000478938 GMEB1Q9Y692 573 aa22.91■■□□□ 1.26
SDF4-206ENST00000478938 SLC4A7Q9Y6M7 1214 aa22.91■■□□□ 1.26
SDF4-206ENST00000478938 TNRQ92752 1358 aa22.9■■□□□ 1.26
SDF4-206ENST00000478938 RGPD2P0DJD1 1756 aa22.9■■□□□ 1.26
SDF4-206ENST00000478938 CBX6O95503 412 aa22.9■■□□□ 1.26
SDF4-206ENST00000478938 UBA7P41226 1012 aa22.9■■□□□ 1.26
SDF4-206ENST00000478938 RTP1P59025 263 aa22.9■■□□□ 1.26
SDF4-206ENST00000478938 OCRLQ01968 901 aa22.9■■□□□ 1.26
SDF4-206ENST00000478938 MPP2Q14168 576 aa22.9■■□□□ 1.26
SDF4-206ENST00000478938 NAP1L3Q99457 506 aaPredicted RBP22.9■■□□□ 1.26
SDF4-206ENST00000478938 LSM14BQ9BX40 385 aaKnown RBP22.9■■□□□ 1.26
SDF4-206ENST00000478938 ATRNO75882 1429 aa22.9■■□□□ 1.26
SDF4-206ENST00000478938 CHD4Q14839 1912 aa22.9■■□□□ 1.26
SDF4-206ENST00000478938 PRPF3O43395 683 aaKnown RBP22.9■■□□□ 1.26
SDF4-206ENST00000478938 LTKP29376 864 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms