RNA–Protein interactions for RNA: ENST00000478776.1

VLDLR-204, Transcript of very low density lipoprotein receptor, humanhuman

TSL 3

Gene VLDLR, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-204ENST00000478776 A0A1W2PRX2 142 aa5.04□□□□□ -1.6
VLDLR-204ENST00000478776 PRAMEF22A3QJZ6 481 aa5.04□□□□□ -1.6
VLDLR-204ENST00000478776 PMS2P1A4D2B8 440 aa5.04□□□□□ -1.6
VLDLR-204ENST00000478776 PDPK1O15530 556 aa5.04□□□□□ -1.6
VLDLR-204ENST00000478776 MMEP08473 750 aa5.04□□□□□ -1.6
VLDLR-204ENST00000478776 STAT5BP51692 787 aa5.04□□□□□ -1.6
VLDLR-204ENST00000478776 MAP3K12Q12852 859 aa5.04□□□□□ -1.6
VLDLR-204ENST00000478776 CNGB1Q14028 1251 aaPredicted RBP5.04□□□□□ -1.6
VLDLR-204ENST00000478776 KANK2Q63ZY3 851 aa5.04□□□□□ -1.6
VLDLR-204ENST00000478776 ZNF662Q6ZS27 426 aa5.04□□□□□ -1.6
VLDLR-204ENST00000478776 SPATC1Q76KD6 591 aa5.04□□□□□ -1.6
VLDLR-204ENST00000478776 GSPT2Q8IYD1 628 aaKnown RBP5.04□□□□□ -1.6
VLDLR-204ENST00000478776 SLC2A4RGQ9NR83 387 aa5.04□□□□□ -1.6
VLDLR-204ENST00000478776 PCDHA9Q9Y5H5 950 aa5.04□□□□□ -1.6
VLDLR-204ENST00000478776 KRTAP23-1A1A580 65 aa5.03□□□□□ -1.6
VLDLR-204ENST00000478776 TMEM191CA6NGB0 347 aa5.03□□□□□ -1.6
VLDLR-204ENST00000478776 ZNF561-AS1K7EIQ3 104 aa5.03□□□□□ -1.6
VLDLR-204ENST00000478776 ARVCFO00192 962 aa5.03□□□□□ -1.6
VLDLR-204ENST00000478776 SCDO00767 359 aa5.03□□□□□ -1.6
VLDLR-204ENST00000478776 PEX11BO96011 259 aa5.03□□□□□ -1.6
VLDLR-204ENST00000478776 GABREP78334 506 aa5.03□□□□□ -1.6
VLDLR-204ENST00000478776 RIN1Q13671 783 aa5.03□□□□□ -1.6
VLDLR-204ENST00000478776 RASGRF1Q13972 1273 aa5.03□□□□□ -1.6
VLDLR-204ENST00000478776 RASA3Q14644 834 aa5.03□□□□□ -1.6
VLDLR-204ENST00000478776 RRP1BQ14684 758 aaKnown RBP5.03□□□□□ -1.6
VLDLR-204ENST00000478776 MKL1Q969V6 931 aa5.03□□□□□ -1.6
VLDLR-204ENST00000478776 GBP4Q96PP9 640 aa5.03□□□□□ -1.6
VLDLR-204ENST00000478776 DEPDC7Q96QD5 511 aa5.03□□□□□ -1.6
VLDLR-204ENST00000478776 SRPK1Q96SB4 655 aaKnown RBP5.03□□□□□ -1.6
VLDLR-204ENST00000478776 TTPALQ9BTX7 342 aa5.03□□□□□ -1.6
VLDLR-204ENST00000478776 OSBPL2Q9H1P3 480 aa5.03□□□□□ -1.6
VLDLR-204ENST00000478776 SNTG2Q9NY99 539 aa5.03□□□□□ -1.6
VLDLR-204ENST00000478776 CEP72Q9P209 647 aa5.03□□□□□ -1.6
VLDLR-204ENST00000478776 PFDN2Q9UHV9 154 aa5.03□□□□□ -1.6
VLDLR-204ENST00000478776 DMRT1Q9Y5R6 373 aa5.03□□□□□ -1.6
VLDLR-204ENST00000478776 GOLGA8BA8MQT2 603 aa5.02□□□□□ -1.61
VLDLR-204ENST00000478776 FOXP2O15409 715 aa5.02□□□□□ -1.61
VLDLR-204ENST00000478776 H2AFYO75367 372 aaKnown RBP5.02□□□□□ -1.61
VLDLR-204ENST00000478776 MPIG6BO95866 241 aa5.02□□□□□ -1.61
VLDLR-204ENST00000478776 APEX1P27695 318 aaKnown RBP5.02□□□□□ -1.61
VLDLR-204ENST00000478776 SESN2P58004 480 aaPredicted RBP5.02□□□□□ -1.61
VLDLR-204ENST00000478776 LACTBP83111 547 aaPredicted RBP5.02□□□□□ -1.61
VLDLR-204ENST00000478776 HGFACQ04756 655 aa5.02□□□□□ -1.61
VLDLR-204ENST00000478776 SSRP1Q08945 709 aaKnown RBP5.02□□□□□ -1.61
VLDLR-204ENST00000478776 CCDC144BQ3MJ40 725 aa5.02□□□□□ -1.61
VLDLR-204ENST00000478776 MTERF2Q49AM1 385 aa5.02□□□□□ -1.61
VLDLR-204ENST00000478776 FAM209AQ5JX71 171 aa5.02□□□□□ -1.61
VLDLR-204ENST00000478776 CISD2Q8N5K1 135 aaKnown RBP5.02□□□□□ -1.61
VLDLR-204ENST00000478776 ASB15Q8WXK1 588 aa5.02□□□□□ -1.61
VLDLR-204ENST00000478776 RABGGTAQ92696 567 aa5.02□□□□□ -1.61
VLDLR-204ENST00000478776 LPPQ93052 612 aa5.02□□□□□ -1.61
VLDLR-204ENST00000478776 AGO3Q9H9G7 860 aaKnown RBP5.02□□□□□ -1.61
VLDLR-204ENST00000478776 SMURF1Q9HCE7 757 aa5.02□□□□□ -1.61
VLDLR-204ENST00000478776 KCNH7Q9NS40 1196 aa5.02□□□□□ -1.61
VLDLR-204ENST00000478776 DIAPH1O60610 1272 aaKnown RBP5.01□□□□□ -1.61
VLDLR-204ENST00000478776 CRTAMO95727 393 aa5.01□□□□□ -1.61
VLDLR-204ENST00000478776 ATP2C1P98194 919 aaPredicted RBP5.01□□□□□ -1.61
VLDLR-204ENST00000478776 ADAM15Q13444 863 aa5.01□□□□□ -1.61
VLDLR-204ENST00000478776 BMS1Q14692 1282 aaKnown RBP5.01□□□□□ -1.61
VLDLR-204ENST00000478776 TMEM132BQ14DG7 1078 aa5.01□□□□□ -1.61
VLDLR-204ENST00000478776 KRTAP15-1Q3LI76 137 aa5.01□□□□□ -1.61
VLDLR-204ENST00000478776 SPTY2D1Q68D10 685 aaPredicted RBP5.01□□□□□ -1.61
VLDLR-204ENST00000478776 DPY19L2P1Q6NXN4 242 aa5.01□□□□□ -1.61
VLDLR-204ENST00000478776 ZNF627Q7L945 461 aa5.01□□□□□ -1.61
VLDLR-204ENST00000478776 ULK2Q8IYT8 1036 aa5.01□□□□□ -1.61
VLDLR-204ENST00000478776 ZBTB38Q8NAP3 1195 aaPredicted RBP5.01□□□□□ -1.61
VLDLR-204ENST00000478776 GCDHQ92947 438 aaPredicted RBP5.01□□□□□ -1.61
VLDLR-204ENST00000478776 DNAJC7Q99615 494 aa5.01□□□□□ -1.61
VLDLR-204ENST00000478776 ZSWIM4Q9H7M6 989 aa5.01□□□□□ -1.61
VLDLR-204ENST00000478776 CDK11AQ9UQ88 783 aaPredicted RBP5.01□□□□□ -1.61
VLDLR-204ENST00000478776 VWA7Q9Y334 891 aa5.01□□□□□ -1.61
VLDLR-204ENST00000478776 SH3BP1Q9Y3L3 701 aa5.01□□□□□ -1.61
VLDLR-204ENST00000478776 ASB1Q9Y576 335 aa5.01□□□□□ -1.61
VLDLR-204ENST00000478776 HIP1RO75146 1068 aa5□□□□□ -1.61
VLDLR-204ENST00000478776 RPS6KA4O75676 772 aa5□□□□□ -1.61
VLDLR-204ENST00000478776 FSTL1Q12841 308 aa5□□□□□ -1.61
VLDLR-204ENST00000478776 KLHDC10Q6PID8 442 aa5□□□□□ -1.61
VLDLR-204ENST00000478776 LRP10Q7Z4F1 713 aa5□□□□□ -1.61
VLDLR-204ENST00000478776 ERCC4Q92889 916 aaPredicted RBP5□□□□□ -1.61
VLDLR-204ENST00000478776 GFM2Q969S9 779 aaKnown RBP5□□□□□ -1.61
VLDLR-204ENST00000478776 MIEF2Q96C03 454 aa5□□□□□ -1.61
VLDLR-204ENST00000478776 AGAP2Q99490 1192 aa5□□□□□ -1.61
VLDLR-204ENST00000478776 PIF1Q9H611 641 aa5□□□□□ -1.61
VLDLR-204ENST00000478776 KDM2BQ8NHM5 1336 aa4.99□□□□□ -1.61
VLDLR-204ENST00000478776 ADCY3O60266 1144 aa4.99□□□□□ -1.61
VLDLR-204ENST00000478776 FAM153BP0C7A2 387 aa4.99□□□□□ -1.61
VLDLR-204ENST00000478776 PTGS2P35354 604 aa4.99□□□□□ -1.61
VLDLR-204ENST00000478776 MAN2A2P49641 1150 aa4.99□□□□□ -1.61
VLDLR-204ENST00000478776 SEC23AQ15436 765 aa4.99□□□□□ -1.61
VLDLR-204ENST00000478776 LAIR1Q6GTX8 287 aa4.99□□□□□ -1.61
VLDLR-204ENST00000478776 LILRB2Q8N423 598 aa4.99□□□□□ -1.61
VLDLR-204ENST00000478776 SLC7A6OSQ96CW6 309 aaPredicted RBP4.99□□□□□ -1.61
VLDLR-204ENST00000478776 DHRS4Q9BTZ2 278 aa4.99□□□□□ -1.61
VLDLR-204ENST00000478776 SLC6A15Q9H2J7 730 aa4.99□□□□□ -1.61
VLDLR-204ENST00000478776 NRDE2Q9H7Z3 1164 aa4.99□□□□□ -1.61
VLDLR-204ENST00000478776 SAE1Q9UBE0 346 aaPredicted RBP4.99□□□□□ -1.61
VLDLR-204ENST00000478776 HECAQ9UBI9 543 aaPredicted RBP4.99□□□□□ -1.61
VLDLR-204ENST00000478776 RBM8AQ9Y5S9 174 aaKnown RBP4.99□□□□□ -1.61
VLDLR-204ENST00000478776 SLC12A8A0AV02 714 aa4.98□□□□□ -1.61
VLDLR-204ENST00000478776 GOLGA6L22H0YM25 854 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms