RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 MOXD1Q6UVY6 613 aa16.3■□□□□ 0.2
SMARCE1-209ENST00000478349 CRIPAKQ8N1N5 446 aa16.3■□□□□ 0.2
SMARCE1-209ENST00000478349 OSMRQ99650 979 aa16.3■□□□□ 0.2
SMARCE1-209ENST00000478349 UPF3BQ9BZI7 483 aaKnown RBP16.3■□□□□ 0.2
SMARCE1-209ENST00000478349 ELAC1Q9H777 363 aaKnown RBP16.3■□□□□ 0.2
SMARCE1-209ENST00000478349 ATP6V0A4Q9HBG4 840 aa16.3■□□□□ 0.2
SMARCE1-209ENST00000478349 TMEM161AQ9NX61 479 aa16.3■□□□□ 0.2
SMARCE1-209ENST00000478349 ST3GAL5Q9UNP4 418 aa16.3■□□□□ 0.2
SMARCE1-209ENST00000478349 NOC2LQ9Y3T9 749 aaKnown RBP16.3■□□□□ 0.2
SMARCE1-209ENST00000478349 ZBTB42B2RXF5 422 aa16.29■□□□□ 0.2
SMARCE1-209ENST00000478349 MSH4O15457 936 aa16.29■□□□□ 0.2
SMARCE1-209ENST00000478349 CHMP2AO43633 222 aa16.29■□□□□ 0.2
SMARCE1-209ENST00000478349 SRGAP2BP0DMP2 458 aa16.29■□□□□ 0.2
SMARCE1-209ENST00000478349 IBSPP21815 317 aaPredicted RBP16.29■□□□□ 0.2
SMARCE1-209ENST00000478349 NONOQ15233 471 aaKnown RBP eCLIP16.29■□□□□ 0.2
SMARCE1-209ENST00000478349 Q4G0T1 1027 aa16.29■□□□□ 0.2
SMARCE1-209ENST00000478349 TRMT1LQ7Z2T5 733 aaKnown RBP16.29■□□□□ 0.2
SMARCE1-209ENST00000478349 KRT25Q7Z3Z0 450 aa16.29■□□□□ 0.2
SMARCE1-209ENST00000478349 RTN4RL1Q86UN2 441 aaPredicted RBP16.29■□□□□ 0.2
SMARCE1-209ENST00000478349 ABI1Q8IZP0 508 aa16.29■□□□□ 0.2
SMARCE1-209ENST00000478349 BLIDQ8IZY5 108 aa16.29■□□□□ 0.2
SMARCE1-209ENST00000478349 DAGLBQ8NCG7 672 aa16.29■□□□□ 0.2
SMARCE1-209ENST00000478349 TBCKQ8TEA7 893 aa16.29■□□□□ 0.2
SMARCE1-209ENST00000478349 RSPH1Q8WYR4 309 aa16.29■□□□□ 0.2
SMARCE1-209ENST00000478349 SLC5A5Q92911 643 aa16.29■□□□□ 0.2
SMARCE1-209ENST00000478349 LENG9Q96B70 501 aa16.29■□□□□ 0.2
SMARCE1-209ENST00000478349 NAP1L4Q99733 375 aaKnown RBP16.29■□□□□ 0.2
SMARCE1-209ENST00000478349 TMX1Q9H3N1 280 aa16.29■□□□□ 0.2
SMARCE1-209ENST00000478349 TBKBP1A7MCY6 615 aa16.28■□□□□ 0.2
SMARCE1-209ENST00000478349 DKC1O60832 514 aaKnown RBP eCLIP16.28■□□□□ 0.2
SMARCE1-209ENST00000478349 VTNP04004 478 aa16.28■□□□□ 0.2
SMARCE1-209ENST00000478349 ITGB1P05556 798 aa16.28■□□□□ 0.2
SMARCE1-209ENST00000478349 IL9P15248 144 aa16.28■□□□□ 0.2
SMARCE1-209ENST00000478349 LAG3P18627 525 aa16.28■□□□□ 0.2
SMARCE1-209ENST00000478349 ATP4AP20648 1035 aa16.28■□□□□ 0.2
SMARCE1-209ENST00000478349 NDUFV1P49821 464 aa16.28■□□□□ 0.2
SMARCE1-209ENST00000478349 DNM2P50570 870 aa16.28■□□□□ 0.2
SMARCE1-209ENST00000478349 CLCN3P51790 818 aa16.28■□□□□ 0.2
SMARCE1-209ENST00000478349 HYAL1Q12794 435 aa16.28■□□□□ 0.2
SMARCE1-209ENST00000478349 TOB2Q14106 344 aaPredicted RBP16.28■□□□□ 0.2
SMARCE1-209ENST00000478349 PDE12Q6L8Q7 609 aaKnown RBP16.28■□□□□ 0.2
SMARCE1-209ENST00000478349 EFCAB12Q6NXP0 572 aa16.28■□□□□ 0.2
SMARCE1-209ENST00000478349 MIER3Q7Z3K6 550 aa16.28■□□□□ 0.2
SMARCE1-209ENST00000478349 KLHL23Q8NBE8 558 aa16.28■□□□□ 0.2
SMARCE1-209ENST00000478349 UIMC1Q96RL1 719 aa16.28■□□□□ 0.2
SMARCE1-209ENST00000478349 JPH2Q9BR39 696 aaPredicted RBP16.28■□□□□ 0.2
SMARCE1-209ENST00000478349 ALG13Q9NP73 1137 aaKnown RBP16.28■□□□□ 0.2
SMARCE1-209ENST00000478349 PDRG1Q9NUG6 133 aa16.28■□□□□ 0.2
SMARCE1-209ENST00000478349 MUC3AQ02505 3323 aa16.28■□□□□ 0.2
SMARCE1-209ENST00000478349 CARNS1A5YM72 827 aa16.27■□□□□ 0.2
SMARCE1-209ENST00000478349 C9IYK1 514 aa16.27■□□□□ 0.2
SMARCE1-209ENST00000478349 PI4K2BG5E9Z4 385 aa16.27■□□□□ 0.2
SMARCE1-209ENST00000478349 PPFIA3O75145 1194 aa16.27■□□□□ 0.2
SMARCE1-209ENST00000478349 PPM1AP35813 382 aa16.27■□□□□ 0.2
SMARCE1-209ENST00000478349 NLRP11P59045 1033 aaKnown RBP16.27■□□□□ 0.2
SMARCE1-209ENST00000478349 SMAD4Q13485 552 aaKnown RBP16.27■□□□□ 0.2
SMARCE1-209ENST00000478349 ANKRD1Q15327 319 aa16.27■□□□□ 0.2
SMARCE1-209ENST00000478349 CTC1Q2NKJ3 1217 aa16.27■□□□□ 0.2
SMARCE1-209ENST00000478349 XKR3Q5GH77 459 aa16.27■□□□□ 0.2
SMARCE1-209ENST00000478349 FAM228AQ86W67 206 aa16.27■□□□□ 0.2
SMARCE1-209ENST00000478349 ADHFE1Q8IWW8 467 aa16.27■□□□□ 0.2
SMARCE1-209ENST00000478349 THNSL1Q8IYQ7 743 aa16.27■□□□□ 0.2
SMARCE1-209ENST00000478349 POF1BQ8WVV4 589 aa16.27■□□□□ 0.2
SMARCE1-209ENST00000478349 TMEM40Q8WWA1 233 aa16.27■□□□□ 0.2
SMARCE1-209ENST00000478349 PPP1R16BQ96T49 567 aa16.27■□□□□ 0.2
SMARCE1-209ENST00000478349 DACT1Q9NYF0 836 aa16.27■□□□□ 0.2
SMARCE1-209ENST00000478349 PUF60Q9UHX1 559 aaKnown RBP16.27■□□□□ 0.2
SMARCE1-209ENST00000478349 ARIH1Q9Y4X5 557 aaPredicted RBP16.27■□□□□ 0.2
SMARCE1-209ENST00000478349 XIRP2A4UGR9 3374 aa16.27■□□□□ 0.19
SMARCE1-209ENST00000478349 TTC3P53804 2025 aa16.26■□□□□ 0.19
SMARCE1-209ENST00000478349 CYP3A7-CYP3A51PA0A087WV96 503 aa16.26■□□□□ 0.19
SMARCE1-209ENST00000478349 CCDC194A0A1B0GVG4 234 aa16.26■□□□□ 0.19
SMARCE1-209ENST00000478349 GPR37L1O60883 481 aa16.26■□□□□ 0.19
SMARCE1-209ENST00000478349 GPR32O75388 356 aa16.26■□□□□ 0.19
SMARCE1-209ENST00000478349 CSPG5O95196 566 aa16.26■□□□□ 0.19
SMARCE1-209ENST00000478349 GCFC2P16383 781 aaKnown RBP16.26■□□□□ 0.19
SMARCE1-209ENST00000478349 EIF4BP23588 611 aaKnown RBP16.26■□□□□ 0.19
SMARCE1-209ENST00000478349 CYP3A7P24462 503 aa16.26■□□□□ 0.19
SMARCE1-209ENST00000478349 EXOC8Q8IYI6 725 aa16.26■□□□□ 0.19
SMARCE1-209ENST00000478349 LRRC43Q8N309 656 aa16.26■□□□□ 0.19
SMARCE1-209ENST00000478349 EFHBQ8N7U6 833 aa16.26■□□□□ 0.19
SMARCE1-209ENST00000478349 SPPL3Q8TCT6 385 aa16.26■□□□□ 0.19
SMARCE1-209ENST00000478349 MICAL1Q8TDZ2 1067 aa16.26■□□□□ 0.19
SMARCE1-209ENST00000478349 NLRP7Q8WX94 980 aa16.26■□□□□ 0.19
SMARCE1-209ENST00000478349 WASF1Q92558 559 aa16.26■□□□□ 0.19
SMARCE1-209ENST00000478349 CDCA3Q99618 268 aaPredicted RBP16.26■□□□□ 0.19
SMARCE1-209ENST00000478349 INO80BQ9C086 356 aaPredicted RBP16.26■□□□□ 0.19
SMARCE1-209ENST00000478349 TMEM117Q9H0C3 514 aa16.26■□□□□ 0.19
SMARCE1-209ENST00000478349 UNC45AQ9H3U1 944 aa16.26■□□□□ 0.19
SMARCE1-209ENST00000478349 IGFLR1Q9H665 355 aa16.26■□□□□ 0.19
SMARCE1-209ENST00000478349 EPHX3Q9H6B9 360 aa16.26■□□□□ 0.19
SMARCE1-209ENST00000478349 CDHR5Q9HBB8 845 aa16.26■□□□□ 0.19
SMARCE1-209ENST00000478349 TLR9Q9NR96 1032 aa16.26■□□□□ 0.19
SMARCE1-209ENST00000478349 SEPT9Q9UHD8 586 aaPredicted RBP16.26■□□□□ 0.19
SMARCE1-209ENST00000478349 CD207Q9UJ71 328 aa16.26■□□□□ 0.19
SMARCE1-209ENST00000478349 STK36Q9NRP7 1315 aa16.25■□□□□ 0.19
SMARCE1-209ENST00000478349 MGEA5O60502 916 aa16.25■□□□□ 0.19
SMARCE1-209ENST00000478349 PSMD10O75832 226 aa16.25■□□□□ 0.19
SMARCE1-209ENST00000478349 SFPQP23246 707 aaKnown RBP eCLIP16.25■□□□□ 0.19
SMARCE1-209ENST00000478349 STK3Q13188 491 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 138.6 ms