RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 VN1R2Q8NFZ6 395 aa10.98□□□□□ -0.65
CCM2-210ENST00000478169 BBXQ8WY36 941 aaPredicted RBP10.98□□□□□ -0.65
CCM2-210ENST00000478169 MRPS27Q92552 414 aaKnown RBP10.98□□□□□ -0.65
CCM2-210ENST00000478169 ASIC4Q96FT7 647 aa10.98□□□□□ -0.65
CCM2-210ENST00000478169 PHOX2BQ99453 314 aa10.98□□□□□ -0.65
CCM2-210ENST00000478169 LRRC2Q9BYS8 371 aa10.98□□□□□ -0.65
CCM2-210ENST00000478169 TMEM117Q9H0C3 514 aa10.98□□□□□ -0.65
CCM2-210ENST00000478169 S1PR5Q9H228 398 aa10.98□□□□□ -0.65
CCM2-210ENST00000478169 CWH43Q9H720 699 aa10.98□□□□□ -0.65
CCM2-210ENST00000478169 NGRNQ9NPE2 291 aaKnown RBP10.98□□□□□ -0.65
CCM2-210ENST00000478169 ZNF302Q9NR11 478 aa10.98□□□□□ -0.65
CCM2-210ENST00000478169 CNTNAP5Q8WYK1 1306 aa10.98□□□□□ -0.65
CCM2-210ENST00000478169 PTPRZ1P23471 2315 aaPredicted RBP10.98□□□□□ -0.65
CCM2-210ENST00000478169 SMCO2A6NFE2 343 aa10.97□□□□□ -0.65
CCM2-210ENST00000478169 DHX15O43143 795 aaKnown RBP10.97□□□□□ -0.65
CCM2-210ENST00000478169 HOXA2O43364 376 aa10.97□□□□□ -0.65
CCM2-210ENST00000478169 ST18O60284 1047 aa10.97□□□□□ -0.65
CCM2-210ENST00000478169 HOXB8P17481 243 aaPredicted RBP10.97□□□□□ -0.65
CCM2-210ENST00000478169 ATP4AP20648 1035 aa10.97□□□□□ -0.65
CCM2-210ENST00000478169 PPM1AP35813 382 aa10.97□□□□□ -0.65
CCM2-210ENST00000478169 TECP42680 631 aa10.97□□□□□ -0.65
CCM2-210ENST00000478169 CLK2P49760 499 aaKnown RBP10.97□□□□□ -0.65
CCM2-210ENST00000478169 NUBP1P53384 320 aa10.97□□□□□ -0.65
CCM2-210ENST00000478169 RBM10P98175 930 aaKnown RBP10.97□□□□□ -0.65
CCM2-210ENST00000478169 FUT2Q10981 343 aa10.97□□□□□ -0.65
CCM2-210ENST00000478169 DSC3Q14574 896 aa10.97□□□□□ -0.65
CCM2-210ENST00000478169 PTPN21Q16825 1174 aa10.97□□□□□ -0.65
CCM2-210ENST00000478169 SWSAP1Q6NVH7 229 aa10.97□□□□□ -0.65
CCM2-210ENST00000478169 APOA5Q6Q788 366 aa10.97□□□□□ -0.65
CCM2-210ENST00000478169 PLA2G4DQ86XP0 818 aa10.97□□□□□ -0.65
CCM2-210ENST00000478169 CCDC60Q8IWA6 550 aaPredicted RBP10.97□□□□□ -0.65
CCM2-210ENST00000478169 ZNF710Q8N1W2 664 aa10.97□□□□□ -0.65
CCM2-210ENST00000478169 PGBD1Q96JS3 809 aa10.97□□□□□ -0.65
CCM2-210ENST00000478169 OSMRQ99650 979 aa10.97□□□□□ -0.65
CCM2-210ENST00000478169 BARHL2Q9NY43 387 aa10.97□□□□□ -0.65
CCM2-210ENST00000478169 MAFBQ9Y5Q3 323 aaPredicted RBP10.97□□□□□ -0.65
CCM2-210ENST00000478169 V9GY48 417 aaPredicted RBP10.97□□□□□ -0.65
CCM2-210ENST00000478169 FAM86B1E9PN63 330 aa10.96□□□□□ -0.65
CCM2-210ENST00000478169 DDX39AO00148 427 aaKnown RBP10.96□□□□□ -0.65
CCM2-210ENST00000478169 IPO5O00410 1097 aaKnown RBP10.96□□□□□ -0.65
CCM2-210ENST00000478169 MAGEB2O15479 319 aa10.96□□□□□ -0.65
CCM2-210ENST00000478169 GPR32O75388 356 aa10.96□□□□□ -0.65
CCM2-210ENST00000478169 C22orf31O95567 290 aa10.96□□□□□ -0.65
CCM2-210ENST00000478169 CYP3A4P08684 503 aa10.96□□□□□ -0.65
CCM2-210ENST00000478169 FAM86B2P0C5J1 330 aa10.96□□□□□ -0.65
CCM2-210ENST00000478169 FGFR1P11362 822 aa10.96□□□□□ -0.65
CCM2-210ENST00000478169 AVPR2P30518 371 aa10.96□□□□□ -0.65
CCM2-210ENST00000478169 KRT17Q04695 432 aa10.96□□□□□ -0.65
CCM2-210ENST00000478169 RTN1Q16799 776 aa10.96□□□□□ -0.65
CCM2-210ENST00000478169 KIZQ2M2Z5 673 aa10.96□□□□□ -0.65
CCM2-210ENST00000478169 PLPP4Q5VZY2 271 aa10.96□□□□□ -0.65
CCM2-210ENST00000478169 ZNF746Q6NUN9 644 aaPredicted RBP10.96□□□□□ -0.65
CCM2-210ENST00000478169 SYCE2Q6PIF2 218 aa10.96□□□□□ -0.65
CCM2-210ENST00000478169 FAM228AQ86W67 206 aa10.96□□□□□ -0.65
CCM2-210ENST00000478169 CKAP2LQ8IYA6 745 aa10.96□□□□□ -0.65
CCM2-210ENST00000478169 SMAP1Q8IYB5 467 aaPredicted RBP10.96□□□□□ -0.65
CCM2-210ENST00000478169 TCF25Q9BQ70 676 aa10.96□□□□□ -0.65
CCM2-210ENST00000478169 ESYT1Q9BSJ8 1104 aa10.96□□□□□ -0.65
CCM2-210ENST00000478169 ENTPD7Q9NQZ7 604 aa10.96□□□□□ -0.65
CCM2-210ENST00000478169 TBC1D22BQ9NU19 505 aa10.96□□□□□ -0.65
CCM2-210ENST00000478169 HCSTQ9UBK5 93 aa10.96□□□□□ -0.65
CCM2-210ENST00000478169 CEP131Q9UPN4 1083 aa10.96□□□□□ -0.65
CCM2-210ENST00000478169 USP34Q70CQ2 3546 aa10.96□□□□□ -0.66
CCM2-210ENST00000478169 IGLV3-22A0A075B6J6 115 aa10.95□□□□□ -0.66
CCM2-210ENST00000478169 ZBTB43O43298 467 aa10.95□□□□□ -0.66
CCM2-210ENST00000478169 PSAPP07602 524 aa10.95□□□□□ -0.66
CCM2-210ENST00000478169 ZSCAN20P17040 1043 aaPredicted RBP10.95□□□□□ -0.66
CCM2-210ENST00000478169 SETQ01105 290 aaPredicted RBP10.95□□□□□ -0.66
CCM2-210ENST00000478169 EXOSC10Q01780 885 aaKnown RBP10.95□□□□□ -0.66
CCM2-210ENST00000478169 APOBRQ0VD83 1088 aa10.95□□□□□ -0.66
CCM2-210ENST00000478169 RNF20Q5VTR2 975 aa10.95□□□□□ -0.66
CCM2-210ENST00000478169 MCTP2Q6DN12 878 aa10.95□□□□□ -0.66
CCM2-210ENST00000478169 KCNT2Q6UVM3 1135 aa10.95□□□□□ -0.66
CCM2-210ENST00000478169 LRRC55Q6ZSA7 311 aa10.95□□□□□ -0.66
CCM2-210ENST00000478169 ZBTB33Q86T24 672 aa10.95□□□□□ -0.66
CCM2-210ENST00000478169 ABI1Q8IZP0 508 aa10.95□□□□□ -0.66
CCM2-210ENST00000478169 LRRC43Q8N309 656 aa10.95□□□□□ -0.66
CCM2-210ENST00000478169 METTL13Q8N6R0 699 aa10.95□□□□□ -0.66
CCM2-210ENST00000478169 CRYGNQ8WXF5 182 aa10.95□□□□□ -0.66
CCM2-210ENST00000478169 CASP10Q92851 521 aa10.95□□□□□ -0.66
CCM2-210ENST00000478169 FAM167AQ96KS9 214 aa10.95□□□□□ -0.66
CCM2-210ENST00000478169 RIPOR3Q96MK2 946 aa10.95□□□□□ -0.66
CCM2-210ENST00000478169 ZNF558Q96NG5 402 aa10.95□□□□□ -0.66
CCM2-210ENST00000478169 NECTIN4Q96NY8 510 aa10.95□□□□□ -0.66
CCM2-210ENST00000478169 CASD1Q96PB1 797 aa10.95□□□□□ -0.66
CCM2-210ENST00000478169 ZNF577Q9BSK1 485 aa10.95□□□□□ -0.66
CCM2-210ENST00000478169 NR2E1Q9Y466 385 aa10.95□□□□□ -0.66
CCM2-210ENST00000478169 PCDHA10Q9Y5I2 948 aa10.95□□□□□ -0.66
CCM2-210ENST00000478169 ZFHX2Q9C0A1 2572 aaPredicted RBP10.95□□□□□ -0.66
CCM2-210ENST00000478169 RIF1Q5UIP0 2472 aaKnown RBP10.95□□□□□ -0.66
CCM2-210ENST00000478169 PLXNA3P51805 1871 aa10.94□□□□□ -0.66
CCM2-210ENST00000478169 FAM186AA6NE01 2351 aa10.94□□□□□ -0.66
CCM2-210ENST00000478169 HIDE1A8MVS5 230 aa10.94□□□□□ -0.66
CCM2-210ENST00000478169 VTNP04004 478 aa10.94□□□□□ -0.66
CCM2-210ENST00000478169 EIF4BP23588 611 aaKnown RBP10.94□□□□□ -0.66
CCM2-210ENST00000478169 TMOD1P28289 359 aa10.94□□□□□ -0.66
CCM2-210ENST00000478169 RCAN1P53805 252 aa10.94□□□□□ -0.66
CCM2-210ENST00000478169 VCPP55072 806 aaKnown RBP10.94□□□□□ -0.66
CCM2-210ENST00000478169 ITIH3Q06033 890 aa10.94□□□□□ -0.66
CCM2-210ENST00000478169 TPRNQ4KMQ1 711 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms