RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 SCGB1D2O95969 90 aa4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 CYBBP04839 570 aa4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 TPM3P06753 285 aa4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 FAM153BP0C7A2 387 aa4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 SETSIPP0DME0 302 aa4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 SFTPCP11686 197 aa4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 GYS1P13807 737 aa4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 GLULP15104 373 aa4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 ATF7P17544 494 aaPredicted RBP4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 KCNA6P17658 529 aa4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 BTF3P20290 206 aaKnown RBP4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 SDHBP21912 280 aa4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 ALDH1B1P30837 517 aa4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 UBA7P41226 1012 aa4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 TXKP42681 527 aa4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 RXRGP48443 463 aa4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 CDKN1CP49918 316 aaPredicted RBP4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 COPAP53621 1224 aa4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 RPL11P62913 178 aaKnown RBP4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 UBXN2AP68543 259 aa4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 PURAQ00577 322 aaKnown RBP4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 PFKPQ01813 784 aa4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 NUCB1Q02818 461 aa4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 SMC1AQ14683 1233 aaKnown RBP4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 NR1I3Q14994 352 aa4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 RAB3GAP1Q15042 981 aa4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 COBLL1Q53SF7 1204 aa4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 AGAP9Q5VTM2 703 aa4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 OGFOD2Q6N063 350 aa4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 ZCCHC8Q6NZY4 707 aaKnown RBP4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 LVRNQ6Q4G3 990 aa4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 PAQR3Q6TCH7 311 aa4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 RSPO2Q6UXX9 243 aaPredicted RBP4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 CYP26C1Q6V0L0 522 aa4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 MMS22LQ6ZRQ5 1243 aa4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 CCDC129Q6ZRS4 1044 aa4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 USP53Q70EK8 1073 aa4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 BRINP3Q76B58 766 aa4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 MTERF4Q7Z6M4 381 aaKnown RBP4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 ZNF605Q86T29 641 aa4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 ERC1Q8IUD2 1116 aa4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 OR8H2Q8N162 312 aa4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 FBXO15Q8NCQ5 510 aaPredicted RBP4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 GIMAP8Q8ND71 665 aaPredicted RBP4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 RCBTB1Q8NDN9 531 aa4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 ZSWIM2Q8NEG5 633 aa4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 USP33Q8TEY7 942 aa4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 THAP3Q8WTV1 239 aaPredicted RBP4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 DCAF4Q8WV16 495 aa4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 N4BP2L2Q92802 583 aaPredicted RBP4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 GSDMAQ96QA5 445 aa4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 TRIM6Q9C030 488 aaPredicted RBP4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 OSBPL5Q9H0X9 879 aaPredicted RBP4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 RWDD1Q9H446 243 aaPredicted RBP4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 RPAP3Q9H6T3 665 aaPredicted RBP4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 ZNF552Q9H707 407 aaPredicted RBP4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 MED4Q9NPJ6 270 aa4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 GPR27Q9NS67 375 aa4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 QPCTLQ9NXS2 382 aa4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 CGNQ9P2M7 1197 aaKnown RBP4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 STAP2Q9UGK3 403 aa4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 GTF3C4Q9UKN8 822 aa4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 TIMM13Q9Y5L4 95 aaPredicted RBP4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 NPFFR2Q9Y5X5 522 aa4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 SLC30A1Q9Y6M5 507 aa4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 ABCC8Q09428 1581 aa4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 CUX1P39880 1505 aa4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 ARAP1Q96P48 1450 aa4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 SHTN1A0MZ66 631 aa4.04□□□□□ -1.76
FNDC3B-209ENST00000478016 ERICH4A6NGS2 130 aa4.04□□□□□ -1.76
FNDC3B-209ENST00000478016 NUDT19A8MXV4 375 aa4.04□□□□□ -1.76
FNDC3B-209ENST00000478016 ALG1L2C9J202 215 aa4.04□□□□□ -1.76
FNDC3B-209ENST00000478016 ARNTLO00327 626 aa4.04□□□□□ -1.76
FNDC3B-209ENST00000478016 FOXN3O00409 490 aaPredicted RBP4.04□□□□□ -1.76
FNDC3B-209ENST00000478016 PEX10O60683 326 aa4.04□□□□□ -1.76
FNDC3B-209ENST00000478016 PPFIA2O75334 1257 aa4.04□□□□□ -1.76
FNDC3B-209ENST00000478016 DBHP09172 617 aa4.04□□□□□ -1.76
FNDC3B-209ENST00000478016 GLI4P10075 376 aa4.04□□□□□ -1.76
FNDC3B-209ENST00000478016 SLC5A1P13866 664 aa4.04□□□□□ -1.76
FNDC3B-209ENST00000478016 RPS2P15880 293 aaKnown RBP4.04□□□□□ -1.76
FNDC3B-209ENST00000478016 SUMO1P63165 101 aaKnown RBP4.04□□□□□ -1.76
FNDC3B-209ENST00000478016 YBX1P67809 324 aaKnown RBP4.04□□□□□ -1.76
FNDC3B-209ENST00000478016 DDX10Q13206 875 aaKnown RBP4.04□□□□□ -1.76
FNDC3B-209ENST00000478016 PDE1CQ14123 709 aaPredicted RBP4.04□□□□□ -1.76
FNDC3B-209ENST00000478016 CBX2Q14781 532 aaPredicted RBP4.04□□□□□ -1.76
FNDC3B-209ENST00000478016 LRRC41Q15345 812 aa4.04□□□□□ -1.76
FNDC3B-209ENST00000478016 SEPT7Q16181 437 aaKnown RBP4.04□□□□□ -1.76
FNDC3B-209ENST00000478016 SLC4A8Q2Y0W8 1093 aa4.04□□□□□ -1.76
FNDC3B-209ENST00000478016 C2orf27AQ580R0 203 aa4.04□□□□□ -1.76
FNDC3B-209ENST00000478016 FAM209AQ5JX71 171 aa4.04□□□□□ -1.76
FNDC3B-209ENST00000478016 ARMC4Q5T2S8 1044 aa4.04□□□□□ -1.76
FNDC3B-209ENST00000478016 FOXB2Q5VYV0 432 aa4.04□□□□□ -1.76
FNDC3B-209ENST00000478016 NXNQ6DKJ4 435 aa4.04□□□□□ -1.76
FNDC3B-209ENST00000478016 ABRAXAS1Q6UWZ7 409 aa4.04□□□□□ -1.76
FNDC3B-209ENST00000478016 USP51Q70EK9 711 aa4.04□□□□□ -1.76
FNDC3B-209ENST00000478016 PNMA8AQ86V59 439 aaPredicted RBP4.04□□□□□ -1.76
FNDC3B-209ENST00000478016 SNX32Q86XE0 403 aa4.04□□□□□ -1.76
FNDC3B-209ENST00000478016 MYOCDQ8IZQ8 938 aa4.04□□□□□ -1.76
FNDC3B-209ENST00000478016 POU5F2Q8N7G0 328 aa4.04□□□□□ -1.76
FNDC3B-209ENST00000478016 IL17REQ8NFR9 667 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms