RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 SNRPFP62306 86 aaKnown RBP13.38□□□□□ -0.27
PTPRF-212ENST00000477970 SMC1AQ14683 1233 aaKnown RBP13.38□□□□□ -0.27
PTPRF-212ENST00000477970 TDRD12Q587J7 1177 aaKnown RBP13.38□□□□□ -0.27
PTPRF-212ENST00000477970 C12orf56Q8IXR9 622 aa13.38□□□□□ -0.27
PTPRF-212ENST00000477970 OSBPL9Q96SU4 736 aa13.38□□□□□ -0.27
PTPRF-212ENST00000477970 MLXIPQ9HAP2 919 aa13.38□□□□□ -0.27
PTPRF-212ENST00000477970 ABCB6Q9NP58 842 aa13.38□□□□□ -0.27
PTPRF-212ENST00000477970 INTUQ9ULD6 942 aa13.38□□□□□ -0.27
PTPRF-212ENST00000477970 PCDHB13Q9Y5F0 798 aa13.38□□□□□ -0.27
PTPRF-212ENST00000477970 DHX15O43143 795 aaKnown RBP13.38□□□□□ -0.27
PTPRF-212ENST00000477970 PPP1R12BO60237 982 aaPredicted RBP13.38□□□□□ -0.27
PTPRF-212ENST00000477970 EIF3JO75822 258 aaKnown RBP13.38□□□□□ -0.27
PTPRF-212ENST00000477970 INPP5BP32019 993 aa13.38□□□□□ -0.27
PTPRF-212ENST00000477970 KLHL30Q0D2K2 578 aa13.38□□□□□ -0.27
PTPRF-212ENST00000477970 MYCT1Q8N699 235 aa13.38□□□□□ -0.27
PTPRF-212ENST00000477970 GLIS2Q9BZE0 524 aaPredicted RBP13.38□□□□□ -0.27
PTPRF-212ENST00000477970 ST6GALNAC4Q9H4F1 302 aa13.38□□□□□ -0.27
PTPRF-212ENST00000477970 JADE2Q9NQC1 790 aa13.38□□□□□ -0.27
PTPRF-212ENST00000477970 ADARB2Q9NS39 739 aaKnown RBP13.38□□□□□ -0.27
PTPRF-212ENST00000477970 ITGB5P18084 799 aa13.37□□□□□ -0.27
PTPRF-212ENST00000477970 GPS2Q13227 327 aa13.37□□□□□ -0.27
PTPRF-212ENST00000477970 XRRA1Q6P2D8 792 aa13.37□□□□□ -0.27
PTPRF-212ENST00000477970 PIGOQ8TEQ8 1089 aa13.37□□□□□ -0.27
PTPRF-212ENST00000477970 LXNQ9BS40 222 aa13.37□□□□□ -0.27
PTPRF-212ENST00000477970 ZNF341Q9BYN7 854 aa13.37□□□□□ -0.27
PTPRF-212ENST00000477970 FBXO28Q9NVF7 368 aa13.37□□□□□ -0.27
PTPRF-212ENST00000477970 WRAP73Q9P2S5 460 aaPredicted RBP13.37□□□□□ -0.27
PTPRF-212ENST00000477970 SRGAP2O75044 1071 aa13.37□□□□□ -0.27
PTPRF-212ENST00000477970 P4HBP07237 508 aaKnown RBP13.37□□□□□ -0.27
PTPRF-212ENST00000477970 RHOXF2BP0C7M4 288 aa13.37□□□□□ -0.27
PTPRF-212ENST00000477970 RFX1P22670 979 aa13.37□□□□□ -0.27
PTPRF-212ENST00000477970 TNFRSF8P28908 595 aa13.37□□□□□ -0.27
PTPRF-212ENST00000477970 RAPGEF1Q13905 1077 aa13.37□□□□□ -0.27
PTPRF-212ENST00000477970 NBPF9Q3BBW0 867 aa13.37□□□□□ -0.27
PTPRF-212ENST00000477970 MIGA2Q7L4E1 593 aa13.37□□□□□ -0.27
PTPRF-212ENST00000477970 RHOXF2Q9BQY4 288 aa13.37□□□□□ -0.27
PTPRF-212ENST00000477970 AGO4Q9HCK5 861 aaKnown RBP13.37□□□□□ -0.27
PTPRF-212ENST00000477970 TBC1D22BQ9NU19 505 aa13.37□□□□□ -0.27
PTPRF-212ENST00000477970 SALL4Q9UJQ4 1053 aa13.37□□□□□ -0.27
PTPRF-212ENST00000477970 RLFQ13129 1914 aa13.36□□□□□ -0.27
PTPRF-212ENST00000477970 GRID2IPA4D2P6 1211 aa13.36□□□□□ -0.27
PTPRF-212ENST00000477970 PDE2AO00408 941 aaPredicted RBP13.36□□□□□ -0.27
PTPRF-212ENST00000477970 MAPK13O15264 365 aa13.36□□□□□ -0.27
PTPRF-212ENST00000477970 MAPK7Q13164 816 aa13.36□□□□□ -0.27
PTPRF-212ENST00000477970 PRDM10Q9NQV6 1147 aa13.36□□□□□ -0.27
PTPRF-212ENST00000477970 PHIPQ8WWQ0 1821 aa13.36□□□□□ -0.27
PTPRF-212ENST00000477970 A0A0A6YYK5 440 aaPredicted RBP13.36□□□□□ -0.27
PTPRF-212ENST00000477970 GMPSP49915 693 aaPredicted RBP13.36□□□□□ -0.27
PTPRF-212ENST00000477970 RASA3Q14644 834 aa13.36□□□□□ -0.27
PTPRF-212ENST00000477970 GLE1Q53GS7 698 aaKnown RBP13.36□□□□□ -0.27
PTPRF-212ENST00000477970 CCDC70Q6NSX1 233 aa13.36□□□□□ -0.27
PTPRF-212ENST00000477970 CHADLQ6NUI6 762 aa13.36□□□□□ -0.27
PTPRF-212ENST00000477970 FAM186BQ8IYM0 893 aa13.36□□□□□ -0.27
PTPRF-212ENST00000477970 SLC17A8Q8NDX2 589 aa13.36□□□□□ -0.27
PTPRF-212ENST00000477970 VTI1AQ96AJ9 217 aa13.36□□□□□ -0.27
PTPRF-212ENST00000477970 PKNOX2Q96KN3 472 aa13.36□□□□□ -0.27
PTPRF-212ENST00000477970 AGBL1Q96MI9 1066 aa13.36□□□□□ -0.27
PTPRF-212ENST00000477970 TLR10Q9BXR5 811 aa13.36□□□□□ -0.27
PTPRF-212ENST00000477970 COL20A1Q9P218 1284 aa13.36□□□□□ -0.27
PTPRF-212ENST00000477970 CLSTN1O94985 981 aa13.36□□□□□ -0.27
PTPRF-212ENST00000477970 SLC9A1P19634 815 aa13.36□□□□□ -0.27
PTPRF-212ENST00000477970 KCNA4P22459 653 aa13.36□□□□□ -0.27
PTPRF-212ENST00000477970 TKFCQ3LXA3 575 aa13.36□□□□□ -0.27
PTPRF-212ENST00000477970 HS2ST1Q7LGA3 356 aa13.36□□□□□ -0.27
PTPRF-212ENST00000477970 FAM178BQ8IXR5 827 aa13.36□□□□□ -0.27
PTPRF-212ENST00000477970 RDM1Q8NG50 284 aa13.36□□□□□ -0.27
PTPRF-212ENST00000477970 ZC3H15Q8WU90 426 aaKnown RBP13.36□□□□□ -0.27
PTPRF-212ENST00000477970 HOOK2Q96ED9 719 aa13.36□□□□□ -0.27
PTPRF-212ENST00000477970 CRACR2AQ9BSW2 395 aa13.36□□□□□ -0.27
PTPRF-212ENST00000477970 ACBD3Q9H3P7 528 aa13.36□□□□□ -0.27
PTPRF-212ENST00000477970 AGPAT3Q9NRZ7 376 aa13.36□□□□□ -0.27
PTPRF-212ENST00000477970 KCNH7Q9NS40 1196 aa13.36□□□□□ -0.27
PTPRF-212ENST00000477970 PPP1R9AQ9ULJ8 1098 aa13.36□□□□□ -0.27
PTPRF-212ENST00000477970 FERP16591 822 aa13.35□□□□□ -0.27
PTPRF-212ENST00000477970 NMT1P30419 496 aaKnown RBP13.35□□□□□ -0.27
PTPRF-212ENST00000477970 FAM133AQ8N9E0 248 aa13.35□□□□□ -0.27
PTPRF-212ENST00000477970 CAGE1Q8TC20 777 aa13.35□□□□□ -0.27
PTPRF-212ENST00000477970 TMEM206Q9H813 350 aa13.35□□□□□ -0.27
PTPRF-212ENST00000477970 USP20Q9Y2K6 914 aa13.35□□□□□ -0.27
PTPRF-212ENST00000477970 GJA3Q9Y6H8 435 aa13.35□□□□□ -0.27
PTPRF-212ENST00000477970 A0A087X0T9 212 aa13.35□□□□□ -0.27
PTPRF-212ENST00000477970 ARHGEF35A5YM69 484 aa13.35□□□□□ -0.27
PTPRF-212ENST00000477970 PMM2O15305 246 aa13.35□□□□□ -0.27
PTPRF-212ENST00000477970 CHMP2AO43633 222 aa13.35□□□□□ -0.27
PTPRF-212ENST00000477970 FAM228BP0C875 321 aa13.35□□□□□ -0.27
PTPRF-212ENST00000477970 AARSP49588 968 aaKnown RBP eCLIP13.35□□□□□ -0.27
PTPRF-212ENST00000477970 CASP4P49662 377 aa13.35□□□□□ -0.27
PTPRF-212ENST00000477970 IFI16Q16666 785 aaKnown RBP13.35□□□□□ -0.27
PTPRF-212ENST00000477970 MEI1Q5TIA1 1274 aa13.35□□□□□ -0.27
PTPRF-212ENST00000477970 MIER3Q7Z3K6 550 aa13.35□□□□□ -0.27
PTPRF-212ENST00000477970 SYTL5Q8TDW5 730 aaPredicted RBP13.35□□□□□ -0.27
PTPRF-212ENST00000477970 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.35□□□□□ -0.27
PTPRF-212ENST00000477970 ZNF112Q9UJU3 913 aa13.35□□□□□ -0.27
PTPRF-212ENST00000477970 THSD7BQ9C0I4 1608 aa13.35□□□□□ -0.27
PTPRF-212ENST00000477970 PASKQ96RG2 1323 aa13.35□□□□□ -0.27
PTPRF-212ENST00000477970 OAS2P29728 719 aaKnown RBP13.34□□□□□ -0.27
PTPRF-212ENST00000477970 ZYXQ15942 572 aaKnown RBP13.34□□□□□ -0.27
PTPRF-212ENST00000477970 DAW1Q8N136 415 aa13.34□□□□□ -0.27
PTPRF-212ENST00000477970 SPAG5Q96R06 1193 aa13.34□□□□□ -0.27
PTPRF-212ENST00000477970 SENP7Q9BQF6 1050 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms