RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 HHIPL2Q6UWX4 724 aa6.63□□□□□ -1.35
VPS50-214ENST00000477935 OVCH1Q7RTY7 1134 aa6.63□□□□□ -1.35
VPS50-214ENST00000477935 RALGAPBQ86X10 1494 aa6.63□□□□□ -1.35
VPS50-214ENST00000477935 SYNPOQ8N3V7 929 aa6.63□□□□□ -1.35
VPS50-214ENST00000477935 IGSF22Q8N9C0 903 aa6.63□□□□□ -1.35
VPS50-214ENST00000477935 FEZF2Q8TBJ5 459 aa6.63□□□□□ -1.35
VPS50-214ENST00000477935 APPBP2Q92624 585 aa6.63□□□□□ -1.35
VPS50-214ENST00000477935 LRRIQ1Q96JM4 1722 aa6.63□□□□□ -1.35
VPS50-214ENST00000477935 CLIC6Q96NY7 704 aa6.63□□□□□ -1.35
VPS50-214ENST00000477935 SPON1Q9HCB6 807 aa6.63□□□□□ -1.35
VPS50-214ENST00000477935 RIC8BQ9NVN3 520 aa6.63□□□□□ -1.35
VPS50-214ENST00000477935 FANCLQ9NW38 375 aa6.63□□□□□ -1.35
VPS50-214ENST00000477935 ATP23Q9Y6H3 246 aa6.63□□□□□ -1.35
VPS50-214ENST00000477935 CEP350Q5VT06 3117 aa6.63□□□□□ -1.35
VPS50-214ENST00000477935 UTRNP46939 3433 aa6.62□□□□□ -1.35
VPS50-214ENST00000477935 PIK3C2BO00750 1634 aa6.62□□□□□ -1.35
VPS50-214ENST00000477935 RPRD2Q5VT52 1461 aaKnown RBP6.62□□□□□ -1.35
VPS50-214ENST00000477935 DNAJC8O75937 253 aaPredicted RBP6.62□□□□□ -1.35
VPS50-214ENST00000477935 NPTXRO95502 500 aa6.62□□□□□ -1.35
VPS50-214ENST00000477935 ASLP04424 464 aa6.62□□□□□ -1.35
VPS50-214ENST00000477935 GJA4P35212 333 aa6.62□□□□□ -1.35
VPS50-214ENST00000477935 IGFALSP35858 605 aa6.62□□□□□ -1.35
VPS50-214ENST00000477935 TCEA2Q15560 299 aa6.62□□□□□ -1.35
VPS50-214ENST00000477935 NBPF8Q3BBV2 869 aa6.62□□□□□ -1.35
VPS50-214ENST00000477935 TMEM177Q53S58 311 aa6.62□□□□□ -1.35
VPS50-214ENST00000477935 TTLL10Q6ZVT0 673 aa6.62□□□□□ -1.35
VPS50-214ENST00000477935 DTX3Q8N9I9 347 aa6.62□□□□□ -1.35
VPS50-214ENST00000477935 ADAMTS17Q8TE56 1095 aa6.62□□□□□ -1.35
VPS50-214ENST00000477935 WRNIP1Q96S55 665 aa6.62□□□□□ -1.35
VPS50-214ENST00000477935 XYLT2Q9H1B5 865 aa6.62□□□□□ -1.35
VPS50-214ENST00000477935 DLL4Q9NR61 685 aa6.62□□□□□ -1.35
VPS50-214ENST00000477935 CROTQ9UKG9 612 aa6.62□□□□□ -1.35
VPS50-214ENST00000477935 ZFYVE9O95405 1425 aa6.61□□□□□ -1.35
VPS50-214ENST00000477935 CFAP65Q6ZU64 1925 aaKnown RBP6.61□□□□□ -1.35
VPS50-214ENST00000477935 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.61□□□□□ -1.35
VPS50-214ENST00000477935 OTOL1A6NHN0 477 aaPredicted RBP6.61□□□□□ -1.35
VPS50-214ENST00000477935 CLASP2O75122 1294 aaKnown RBP6.61□□□□□ -1.35
VPS50-214ENST00000477935 RFPL3O75679 317 aa6.61□□□□□ -1.35
VPS50-214ENST00000477935 SDSP20132 328 aa6.61□□□□□ -1.35
VPS50-214ENST00000477935 ZNF460Q14592 562 aa6.61□□□□□ -1.35
VPS50-214ENST00000477935 VPS72Q15906 364 aa6.61□□□□□ -1.35
VPS50-214ENST00000477935 TKFCQ3LXA3 575 aa6.61□□□□□ -1.35
VPS50-214ENST00000477935 CPZQ66K79 652 aa6.61□□□□□ -1.35
VPS50-214ENST00000477935 ZCCHC8Q6NZY4 707 aaKnown RBP6.61□□□□□ -1.35
VPS50-214ENST00000477935 NOP9Q86U38 636 aaKnown RBP6.61□□□□□ -1.35
VPS50-214ENST00000477935 ZNF761Q86XN6 746 aaPredicted RBP6.61□□□□□ -1.35
VPS50-214ENST00000477935 NOSTRINQ8IVI9 506 aa6.61□□□□□ -1.35
VPS50-214ENST00000477935 CD2APQ9Y5K6 639 aa6.61□□□□□ -1.35
VPS50-214ENST00000477935 TNPO3Q9Y5L0 923 aaKnown RBP6.61□□□□□ -1.35
VPS50-214ENST00000477935 EIF2AK4Q9P2K8 1649 aaKnown RBP6.61□□□□□ -1.35
VPS50-214ENST00000477935 CEP162Q5TB80 1403 aa6.6□□□□□ -1.35
VPS50-214ENST00000477935 RIMS2Q9UQ26 1411 aa6.6□□□□□ -1.35
VPS50-214ENST00000477935 B4E1Z4 1266 aa6.6□□□□□ -1.35
VPS50-214ENST00000477935 DDX3XO00571 662 aaKnown RBP eCLIP6.6□□□□□ -1.35
VPS50-214ENST00000477935 OPA1O60313 960 aa6.6□□□□□ -1.35
VPS50-214ENST00000477935 CDC45O75419 566 aa6.6□□□□□ -1.35
VPS50-214ENST00000477935 ENO2P09104 434 aaPredicted RBP6.6□□□□□ -1.35
VPS50-214ENST00000477935 ZNF28P17035 718 aa6.6□□□□□ -1.35
VPS50-214ENST00000477935 HOXA5P20719 270 aa6.6□□□□□ -1.35
VPS50-214ENST00000477935 MLLT6P55198 1093 aaPredicted RBP6.6□□□□□ -1.35
VPS50-214ENST00000477935 PFKPQ01813 784 aa6.6□□□□□ -1.35
VPS50-214ENST00000477935 DBPQ10586 325 aaPredicted RBP6.6□□□□□ -1.35
VPS50-214ENST00000477935 SKIDA1Q1XH10 827 aa6.6□□□□□ -1.35
VPS50-214ENST00000477935 PHF19Q5T6S3 580 aa6.6□□□□□ -1.35
VPS50-214ENST00000477935 PRAMEF18Q5VWM3 479 aa6.6□□□□□ -1.35
VPS50-214ENST00000477935 FSTL4Q6MZW2 842 aa6.6□□□□□ -1.35
VPS50-214ENST00000477935 C16orf86Q6ZW13 317 aa6.6□□□□□ -1.35
VPS50-214ENST00000477935 DDX53Q86TM3 631 aaKnown RBP6.6□□□□□ -1.35
VPS50-214ENST00000477935 ZDHHC14Q8IZN3 488 aa6.6□□□□□ -1.35
VPS50-214ENST00000477935 ZCCHC14Q8WYQ9 949 aaKnown RBP6.6□□□□□ -1.35
VPS50-214ENST00000477935 RAPGEFL1Q9UHV5 662 aa6.6□□□□□ -1.35
VPS50-214ENST00000477935 NOS1P29475 1434 aa6.59□□□□□ -1.35
VPS50-214ENST00000477935 ADAMTS13Q76LX8 1427 aa6.59□□□□□ -1.35
VPS50-214ENST00000477935 PARD3Q8TEW0 1356 aa6.59□□□□□ -1.35
VPS50-214ENST00000477935 ZNF839A8K0R7 811 aa6.59□□□□□ -1.35
VPS50-214ENST00000477935 SCDO00767 359 aa6.59□□□□□ -1.35
VPS50-214ENST00000477935 CYP7B1O75881 506 aa6.59□□□□□ -1.35
VPS50-214ENST00000477935 GLRX3O76003 335 aaKnown RBP6.59□□□□□ -1.35
VPS50-214ENST00000477935 C4BPAP04003 597 aaKnown RBP6.59□□□□□ -1.35
VPS50-214ENST00000477935 IL13P35225 146 aa6.59□□□□□ -1.35
VPS50-214ENST00000477935 SEC23AQ15436 765 aa6.59□□□□□ -1.35
VPS50-214ENST00000477935 TM4SF20Q53R12 229 aa6.59□□□□□ -1.35
VPS50-214ENST00000477935 NT5DC1Q5TFE4 455 aa6.59□□□□□ -1.35
VPS50-214ENST00000477935 MCTP2Q6DN12 878 aa6.59□□□□□ -1.35
VPS50-214ENST00000477935 C2orf69Q8N8R5 385 aa6.59□□□□□ -1.35
VPS50-214ENST00000477935 IGDCC4Q8TDY8 1250 aa6.59□□□□□ -1.35
VPS50-214ENST00000477935 SAMD15Q9P1V8 674 aa6.59□□□□□ -1.35
VPS50-214ENST00000477935 ARHGAP20Q9P2F6 1191 aa6.59□□□□□ -1.35
VPS50-214ENST00000477935 ZFP69BQ9UJL9 534 aa6.59□□□□□ -1.35
VPS50-214ENST00000477935 ARHGEF5Q12774 1597 aa6.59□□□□□ -1.35
VPS50-214ENST00000477935 SPHKAPQ2M3C7 1700 aa6.59□□□□□ -1.36
VPS50-214ENST00000477935 DISP2A7MBM2 1401 aa6.59□□□□□ -1.36
VPS50-214ENST00000477935 NPHP3Q7Z494 1330 aa6.58□□□□□ -1.36
VPS50-214ENST00000477935 A0A0G2JLL6 359 aaPredicted RBP6.58□□□□□ -1.36
VPS50-214ENST00000477935 SLC12A8A0AV02 714 aa6.58□□□□□ -1.36
VPS50-214ENST00000477935 PRAMEF25A6NGN4 478 aa6.58□□□□□ -1.36
VPS50-214ENST00000477935 M0R2C6 588 aa6.58□□□□□ -1.36
VPS50-214ENST00000477935 MECP2P51608 486 aaKnown RBP6.58□□□□□ -1.36
VPS50-214ENST00000477935 GJA9P57773 515 aa6.58□□□□□ -1.36
VPS50-214ENST00000477935 EZH2Q15910 746 aaKnown RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms