RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 KRT76Q01546 638 aa8.47□□□□□ -1.05
SPTLC1-205ENST00000477888 SP4Q02446 784 aa8.47□□□□□ -1.05
SPTLC1-205ENST00000477888 DMWDQ09019 674 aa8.47□□□□□ -1.05
SPTLC1-205ENST00000477888 LETM2Q2VYF4 491 aa8.47□□□□□ -1.05
SPTLC1-205ENST00000477888 ASPRV1Q53RT3 343 aa8.47□□□□□ -1.05
SPTLC1-205ENST00000477888 FCHSD1Q86WN1 690 aa8.47□□□□□ -1.05
SPTLC1-205ENST00000477888 SLC39A11Q8N1S5 342 aa8.47□□□□□ -1.05
SPTLC1-205ENST00000477888 NME8Q8N427 588 aa8.47□□□□□ -1.05
SPTLC1-205ENST00000477888 PNMA1Q8ND90 353 aa8.47□□□□□ -1.05
SPTLC1-205ENST00000477888 SEPT1Q8WYJ6 367 aa8.47□□□□□ -1.05
SPTLC1-205ENST00000477888 NELL1Q92832 810 aa8.47□□□□□ -1.05
SPTLC1-205ENST00000477888 SECISBP2LQ93073 1101 aaKnown RBP8.47□□□□□ -1.05
SPTLC1-205ENST00000477888 TMEM117Q9H0C3 514 aa8.47□□□□□ -1.05
SPTLC1-205ENST00000477888 EPC1Q9H2F5 836 aa8.47□□□□□ -1.05
SPTLC1-205ENST00000477888 ATP6V0A4Q9HBG4 840 aa8.47□□□□□ -1.05
SPTLC1-205ENST00000477888 PARD6AQ9NPB6 346 aa8.47□□□□□ -1.05
SPTLC1-205ENST00000477888 RNF19AQ9NV58 838 aa8.47□□□□□ -1.05
SPTLC1-205ENST00000477888 FBXO4Q9UKT5 387 aa8.47□□□□□ -1.05
SPTLC1-205ENST00000477888 ST3GAL5Q9UNP4 418 aa8.47□□□□□ -1.05
SPTLC1-205ENST00000477888 NOC2LQ9Y3T9 749 aaKnown RBP8.47□□□□□ -1.05
SPTLC1-205ENST00000477888 PCDHGA2Q9Y5H1 932 aa8.47□□□□□ -1.05
SPTLC1-205ENST00000477888 STK24Q9Y6E0 443 aa8.47□□□□□ -1.05
SPTLC1-205ENST00000477888 ZZEF1O43149 2961 aa8.47□□□□□ -1.05
SPTLC1-205ENST00000477888 KIAA1217Q5T5P2 1943 aa8.46□□□□□ -1.05
SPTLC1-205ENST00000477888 DENND3A2RUS2 1198 aa8.46□□□□□ -1.06
SPTLC1-205ENST00000477888 DHX16O60231 1041 aaKnown RBP8.46□□□□□ -1.06
SPTLC1-205ENST00000477888 ATP9AO75110 1047 aa8.46□□□□□ -1.06
SPTLC1-205ENST00000477888 LRRN2O75325 713 aa8.46□□□□□ -1.06
SPTLC1-205ENST00000477888 RFX1P22670 979 aa8.46□□□□□ -1.06
SPTLC1-205ENST00000477888 PMLP29590 882 aa8.46□□□□□ -1.06
SPTLC1-205ENST00000477888 STARD6P59095 220 aa8.46□□□□□ -1.06
SPTLC1-205ENST00000477888 SHC2P98077 582 aa8.46□□□□□ -1.06
SPTLC1-205ENST00000477888 NONOQ15233 471 aaKnown RBP eCLIP8.46□□□□□ -1.06
SPTLC1-205ENST00000477888 CABP7Q86V35 215 aa8.46□□□□□ -1.06
SPTLC1-205ENST00000477888 PJA1Q8NG27 643 aa8.46□□□□□ -1.06
SPTLC1-205ENST00000477888 GPR152Q8TDT2 470 aa8.46□□□□□ -1.06
SPTLC1-205ENST00000477888 TMEM40Q8WWA1 233 aa8.46□□□□□ -1.06
SPTLC1-205ENST00000477888 ATRIPQ8WXE1 791 aa8.46□□□□□ -1.06
SPTLC1-205ENST00000477888 GLG1Q92896 1179 aa8.46□□□□□ -1.06
SPTLC1-205ENST00000477888 ZKSCAN3Q9BRR0 538 aa8.46□□□□□ -1.06
SPTLC1-205ENST00000477888 FOXQ1Q9C009 403 aa8.46□□□□□ -1.06
SPTLC1-205ENST00000477888 SMARCAD1Q9H4L7 1026 aa8.46□□□□□ -1.06
SPTLC1-205ENST00000477888 CDHR5Q9HBB8 845 aa8.46□□□□□ -1.06
SPTLC1-205ENST00000477888 ARHGEF3Q9NR81 526 aa8.46□□□□□ -1.06
SPTLC1-205ENST00000477888 EPS15L1Q9UBC2 864 aa8.46□□□□□ -1.06
SPTLC1-205ENST00000477888 ANGPTL2Q9UKU9 493 aa8.46□□□□□ -1.06
SPTLC1-205ENST00000477888 USP18Q9UMW8 372 aa8.46□□□□□ -1.06
SPTLC1-205ENST00000477888 SMG5Q9UPR3 1016 aaKnown RBP8.46□□□□□ -1.06
SPTLC1-205ENST00000477888 FRMPD4Q14CM0 1322 aa8.46□□□□□ -1.06
SPTLC1-205ENST00000477888 FRYQ5TBA9 3013 aa8.46□□□□□ -1.06
SPTLC1-205ENST00000477888 ZFYVE26Q68DK2 2539 aa8.45□□□□□ -1.06
SPTLC1-205ENST00000477888 SMIM35A0A1B0GVV1 85 aa8.45□□□□□ -1.06
SPTLC1-205ENST00000477888 ZBTB5O15062 677 aa8.45□□□□□ -1.06
SPTLC1-205ENST00000477888 RPS6KA5O75582 802 aa8.45□□□□□ -1.06
SPTLC1-205ENST00000477888 PARP1P09874 1014 aaKnown RBP8.45□□□□□ -1.06
SPTLC1-205ENST00000477888 PCP11498 1178 aaKnown RBP8.45□□□□□ -1.06
SPTLC1-205ENST00000477888 KCNA2P16389 499 aa8.45□□□□□ -1.06
SPTLC1-205ENST00000477888 GIT2Q14161 759 aa8.45□□□□□ -1.06
SPTLC1-205ENST00000477888 DSC3Q14574 896 aa8.45□□□□□ -1.06
SPTLC1-205ENST00000477888 BMS1Q14692 1282 aaKnown RBP8.45□□□□□ -1.06
SPTLC1-205ENST00000477888 C15orf39Q6ZRI6 1047 aa8.45□□□□□ -1.06
SPTLC1-205ENST00000477888 MFSD6Q6ZSS7 791 aa8.45□□□□□ -1.06
SPTLC1-205ENST00000477888 VPS52Q8N1B4 723 aa8.45□□□□□ -1.06
SPTLC1-205ENST00000477888 LRRC43Q8N309 656 aa8.45□□□□□ -1.06
SPTLC1-205ENST00000477888 STAG2Q8N3U4 1231 aa8.45□□□□□ -1.06
SPTLC1-205ENST00000477888 GIMAP8Q8ND71 665 aaPredicted RBP8.45□□□□□ -1.06
SPTLC1-205ENST00000477888 NETO1Q8TDF5 533 aa8.45□□□□□ -1.06
SPTLC1-205ENST00000477888 AUTS2Q8WXX7 1259 aa8.45□□□□□ -1.06
SPTLC1-205ENST00000477888 NXPE3Q969Y0 559 aa8.45□□□□□ -1.06
SPTLC1-205ENST00000477888 GPATCH3Q96I76 525 aa8.45□□□□□ -1.06
SPTLC1-205ENST00000477888 PCYT2Q99447 389 aa8.45□□□□□ -1.06
SPTLC1-205ENST00000477888 ZBP1Q9H171 429 aa8.45□□□□□ -1.06
SPTLC1-205ENST00000477888 SFXN1Q9H9B4 322 aa8.45□□□□□ -1.06
SPTLC1-205ENST00000477888 SLC2A4RGQ9NR83 387 aa8.45□□□□□ -1.06
SPTLC1-205ENST00000477888 ZSCAN32Q9NX65 697 aa8.45□□□□□ -1.06
SPTLC1-205ENST00000477888 KIAA1671Q9BY89 1806 aa8.45□□□□□ -1.06
SPTLC1-205ENST00000477888 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.44□□□□□ -1.06
SPTLC1-205ENST00000477888 GPR182O15218 404 aa8.44□□□□□ -1.06
SPTLC1-205ENST00000477888 HOXA2O43364 376 aa8.44□□□□□ -1.06
SPTLC1-205ENST00000477888 TBC1D4O60343 1298 aa8.44□□□□□ -1.06
SPTLC1-205ENST00000477888 PROS1P07225 676 aa8.44□□□□□ -1.06
SPTLC1-205ENST00000477888 CTSAP10619 480 aa8.44□□□□□ -1.06
SPTLC1-205ENST00000477888 HAND2P61296 217 aa8.44□□□□□ -1.06
SPTLC1-205ENST00000477888 CSTF1Q05048 431 aaKnown RBP8.44□□□□□ -1.06
SPTLC1-205ENST00000477888 WTAPQ15007 396 aa8.44□□□□□ -1.06
SPTLC1-205ENST00000477888 PLCB4Q15147 1175 aa8.44□□□□□ -1.06
SPTLC1-205ENST00000477888 PTPN14Q15678 1187 aa8.44□□□□□ -1.06
SPTLC1-205ENST00000477888 PCNX4Q63HM2 1172 aa8.44□□□□□ -1.06
SPTLC1-205ENST00000477888 DCLRE1AQ6PJP8 1040 aa8.44□□□□□ -1.06
SPTLC1-205ENST00000477888 PPFIBP1Q86W92 1011 aa8.44□□□□□ -1.06
SPTLC1-205ENST00000477888 TMEM173Q86WV6 379 aaPredicted RBP8.44□□□□□ -1.06
SPTLC1-205ENST00000477888 TBC1D10CQ8IV04 446 aa8.44□□□□□ -1.06
SPTLC1-205ENST00000477888 KIAA0319LQ8IZA0 1049 aa8.44□□□□□ -1.06
SPTLC1-205ENST00000477888 PI4K2BQ8TCG2 481 aa8.44□□□□□ -1.06
SPTLC1-205ENST00000477888 TRAPPC12Q8WVT3 735 aa8.44□□□□□ -1.06
SPTLC1-205ENST00000477888 FAM212AQ96EL1 285 aa8.44□□□□□ -1.06
SPTLC1-205ENST00000477888 DDX23Q9BUQ8 820 aaKnown RBP8.44□□□□□ -1.06
SPTLC1-205ENST00000477888 KAT14Q9H8E8 782 aa8.44□□□□□ -1.06
SPTLC1-205ENST00000477888 WDR6Q9NNW5 1121 aaKnown RBP8.44□□□□□ -1.06
SPTLC1-205ENST00000477888 SPATA6Q9NWH7 488 aaPredicted RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms