RNA–Protein interactions for RNA: ENST00000477693.1

NIFK-205, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

TSL 1 (best)

Gene NIFK, Length 1,096 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-205ENST00000477693 MTHFD1LQ6UB35 978 aa10.97□□□□□ -0.65
NIFK-205ENST00000477693 OTOP2Q7RTS6 562 aa10.97□□□□□ -0.65
NIFK-205ENST00000477693 DEFB123Q8N688 67 aa10.97□□□□□ -0.65
NIFK-205ENST00000477693 DNAJB3Q8WWF6 145 aa10.97□□□□□ -0.65
NIFK-205ENST00000477693 ZBTB10Q96DT7 871 aa10.97□□□□□ -0.65
NIFK-205ENST00000477693 USP28Q96RU2 1077 aa10.97□□□□□ -0.65
NIFK-205ENST00000477693 MFRPQ9BY79 579 aa10.97□□□□□ -0.65
NIFK-205ENST00000477693 TMEM60Q9H2L4 133 aa10.97□□□□□ -0.65
NIFK-205ENST00000477693 TTC12Q9H892 705 aaPredicted RBP10.97□□□□□ -0.65
NIFK-205ENST00000477693 NRBP2Q9NSY0 501 aa10.97□□□□□ -0.65
NIFK-205ENST00000477693 CXXC1Q9P0U4 656 aaPredicted RBP10.97□□□□□ -0.65
NIFK-205ENST00000477693 TFIP11Q9UBB9 837 aaKnown RBP10.97□□□□□ -0.65
NIFK-205ENST00000477693 PCDHA12Q9UN75 941 aa10.97□□□□□ -0.65
NIFK-205ENST00000477693 TRIP12Q14669 1992 aaPredicted RBP10.97□□□□□ -0.65
NIFK-205ENST00000477693 SCN5AQ14524 2016 aa10.96□□□□□ -0.65
NIFK-205ENST00000477693 STK25O00506 426 aa10.96□□□□□ -0.65
NIFK-205ENST00000477693 PRPF40AO75400 957 aaKnown RBP10.96□□□□□ -0.65
NIFK-205ENST00000477693 STBD1O95210 358 aa10.96□□□□□ -0.65
NIFK-205ENST00000477693 C22orf31O95567 290 aa10.96□□□□□ -0.65
NIFK-205ENST00000477693 CHRNA1P02708 482 aa10.96□□□□□ -0.65
NIFK-205ENST00000477693 P4HBP07237 508 aaKnown RBP10.96□□□□□ -0.65
NIFK-205ENST00000477693 CTSHP09668 335 aa10.96□□□□□ -0.65
NIFK-205ENST00000477693 ATP2B1P20020 1258 aa10.96□□□□□ -0.65
NIFK-205ENST00000477693 QARSP47897 775 aaKnown RBP10.96□□□□□ -0.65
NIFK-205ENST00000477693 PSMC5P62195 406 aa10.96□□□□□ -0.65
NIFK-205ENST00000477693 MGAT3Q09327 533 aa10.96□□□□□ -0.65
NIFK-205ENST00000477693 PTPAQ15257 358 aa10.96□□□□□ -0.65
NIFK-205ENST00000477693 EPHA7Q15375 998 aa10.96□□□□□ -0.65
NIFK-205ENST00000477693 XKR3Q5GH77 459 aa10.96□□□□□ -0.65
NIFK-205ENST00000477693 NCAPH2Q6IBW4 605 aa10.96□□□□□ -0.65
NIFK-205ENST00000477693 CNKSR3Q6P9H4 555 aa10.96□□□□□ -0.65
NIFK-205ENST00000477693 NME8Q8N427 588 aa10.96□□□□□ -0.65
NIFK-205ENST00000477693 KRI1Q8N9T8 703 aaKnown RBP10.96□□□□□ -0.65
NIFK-205ENST00000477693 BANK1Q8NDB2 785 aa10.96□□□□□ -0.65
NIFK-205ENST00000477693 PYM1Q9BRP8 204 aaKnown RBP10.96□□□□□ -0.65
NIFK-205ENST00000477693 NIFKQ9BYG3 293 aaKnown RBP10.96□□□□□ -0.65
NIFK-205ENST00000477693 FTOQ9C0B1 505 aaKnown RBP eCLIP10.96□□□□□ -0.65
NIFK-205ENST00000477693 LMBRD1Q9NUN5 540 aa10.96□□□□□ -0.65
NIFK-205ENST00000477693 STXBP5LQ9Y2K9 1186 aa10.96□□□□□ -0.65
NIFK-205ENST00000477693 STK24Q9Y6E0 443 aa10.96□□□□□ -0.65
NIFK-205ENST00000477693 KDM3AQ9Y4C1 1321 aa10.95□□□□□ -0.66
NIFK-205ENST00000477693 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.95□□□□□ -0.66
NIFK-205ENST00000477693 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.95□□□□□ -0.66
NIFK-205ENST00000477693 MAGEB2O15479 319 aa10.95□□□□□ -0.66
NIFK-205ENST00000477693 DKC1O60832 514 aaKnown RBP eCLIP10.95□□□□□ -0.66
NIFK-205ENST00000477693 CUTAO60888 179 aa10.95□□□□□ -0.66
NIFK-205ENST00000477693 EFCAB14O75071 495 aa10.95□□□□□ -0.66
NIFK-205ENST00000477693 OR52Z1P0C646 297 aa10.95□□□□□ -0.66
NIFK-205ENST00000477693 CMA1P23946 247 aa10.95□□□□□ -0.66
NIFK-205ENST00000477693 TXKP42681 527 aa10.95□□□□□ -0.66
NIFK-205ENST00000477693 ME1P48163 572 aa10.95□□□□□ -0.66
NIFK-205ENST00000477693 ATP2C1P98194 919 aaPredicted RBP10.95□□□□□ -0.66
NIFK-205ENST00000477693 TARBP2Q15633 366 aaKnown RBP10.95□□□□□ -0.66
NIFK-205ENST00000477693 ZNF174Q15697 407 aa10.95□□□□□ -0.66
NIFK-205ENST00000477693 PLEKHG4Q58EX7 1191 aa10.95□□□□□ -0.66
NIFK-205ENST00000477693 IER5Q5VY09 327 aa10.95□□□□□ -0.66
NIFK-205ENST00000477693 FAM173BQ6P4H8 233 aa10.95□□□□□ -0.66
NIFK-205ENST00000477693 C4orf19Q8IY42 314 aa10.95□□□□□ -0.66
NIFK-205ENST00000477693 LINC01465Q8N7H1 131 aa10.95□□□□□ -0.66
NIFK-205ENST00000477693 C4orf32Q8N8J7 132 aa10.95□□□□□ -0.66
NIFK-205ENST00000477693 NEK9Q8TD19 979 aa10.95□□□□□ -0.66
NIFK-205ENST00000477693 SYAP1Q96A49 352 aaPredicted RBP10.95□□□□□ -0.66
NIFK-205ENST00000477693 AK8Q96MA6 479 aa10.95□□□□□ -0.66
NIFK-205ENST00000477693 CEP89Q96ST8 783 aa10.95□□□□□ -0.66
NIFK-205ENST00000477693 LXNQ9BS40 222 aa10.95□□□□□ -0.66
NIFK-205ENST00000477693 COL25A1Q9BXS0 654 aaPredicted RBP10.95□□□□□ -0.66
NIFK-205ENST00000477693 RAB34Q9BZG1 259 aa10.95□□□□□ -0.66
NIFK-205ENST00000477693 FAM49AQ9H0Q0 323 aaPredicted RBP10.95□□□□□ -0.66
NIFK-205ENST00000477693 SRPRBQ9Y5M8 271 aaKnown RBP10.95□□□□□ -0.66
NIFK-205ENST00000477693 CLIC4Q9Y696 253 aa10.95□□□□□ -0.66
NIFK-205ENST00000477693 SLC4A7Q9Y6M7 1214 aa10.95□□□□□ -0.66
NIFK-205ENST00000477693 SQORQ9Y6N5 450 aa10.95□□□□□ -0.66
NIFK-205ENST00000477693 ABHD14A-ACY1A0A1B0GW23 586 aa10.94□□□□□ -0.66
NIFK-205ENST00000477693 POTEMA6NI47 508 aa10.94□□□□□ -0.66
NIFK-205ENST00000477693 M0QZ92 97 aa10.94□□□□□ -0.66
NIFK-205ENST00000477693 SLC26A4O43511 780 aa10.94□□□□□ -0.66
NIFK-205ENST00000477693 MRPS6P82932 125 aaKnown RBP10.94□□□□□ -0.66
NIFK-205ENST00000477693 PDIA5Q14554 519 aa10.94□□□□□ -0.66
NIFK-205ENST00000477693 NBR1Q14596 966 aa10.94□□□□□ -0.66
NIFK-205ENST00000477693 TCTN1Q2MV58 587 aa10.94□□□□□ -0.66
NIFK-205ENST00000477693 KLHL40Q2TBA0 621 aa10.94□□□□□ -0.66
NIFK-205ENST00000477693 FOXD4L6Q3SYB3 417 aaPredicted RBP10.94□□□□□ -0.66
NIFK-205ENST00000477693 FAM109BQ6ICB4 259 aaPredicted RBP10.94□□□□□ -0.66
NIFK-205ENST00000477693 FOXD4L3Q6VB84 417 aaPredicted RBP10.94□□□□□ -0.66
NIFK-205ENST00000477693 DTHD1Q6ZMT9 781 aa10.94□□□□□ -0.66
NIFK-205ENST00000477693 ANO5Q75V66 913 aa10.94□□□□□ -0.66
NIFK-205ENST00000477693 TRMT1LQ7Z2T5 733 aaKnown RBP10.94□□□□□ -0.66
NIFK-205ENST00000477693 KIAA0319LQ8IZA0 1049 aa10.94□□□□□ -0.66
NIFK-205ENST00000477693 KCTD17Q8N5Z5 321 aa10.94□□□□□ -0.66
NIFK-205ENST00000477693 DBF4BQ8NFT6 615 aa10.94□□□□□ -0.66
NIFK-205ENST00000477693 APBB2Q92870 758 aa10.94□□□□□ -0.66
NIFK-205ENST00000477693 CCDC34Q96HJ3 373 aa10.94□□□□□ -0.66
NIFK-205ENST00000477693 DYDC2Q96IM9 177 aa10.94□□□□□ -0.66
NIFK-205ENST00000477693 SLC9A7Q96T83 725 aa10.94□□□□□ -0.66
NIFK-205ENST00000477693 HSD17B14Q9BPX1 270 aa10.94□□□□□ -0.66
NIFK-205ENST00000477693 EIF2AK1Q9BQI3 630 aaKnown RBP10.94□□□□□ -0.66
NIFK-205ENST00000477693 ZSWIM4Q9H7M6 989 aa10.94□□□□□ -0.66
NIFK-205ENST00000477693 WRAP73Q9P2S5 460 aaPredicted RBP10.94□□□□□ -0.66
NIFK-205ENST00000477693 SEPT9Q9UHD8 586 aaPredicted RBP10.94□□□□□ -0.66
NIFK-205ENST00000477693 PPME1Q9Y570 386 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms