RNA–Protein interactions for RNA: ENST00000477572.1

VPS50-213, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-213ENST00000477572 B4E1Z4 1266 aa6.72□□□□□ -1.33
VPS50-213ENST00000477572 RAD17O75943 681 aa6.72□□□□□ -1.33
VPS50-213ENST00000477572 ASLP04424 464 aa6.72□□□□□ -1.33
VPS50-213ENST00000477572 JMJD7P0C870 316 aa6.72□□□□□ -1.33
VPS50-213ENST00000477572 ACO1P21399 889 aaKnown RBP6.72□□□□□ -1.33
VPS50-213ENST00000477572 STAT3P40763 770 aa6.72□□□□□ -1.33
VPS50-213ENST00000477572 SLC6A3Q01959 620 aa6.72□□□□□ -1.33
VPS50-213ENST00000477572 ADAM15Q13444 863 aa6.72□□□□□ -1.33
VPS50-213ENST00000477572 CC2D1AQ6P1N0 951 aaPredicted RBP6.72□□□□□ -1.33
VPS50-213ENST00000477572 SLC16A11Q8NCK7 471 aa6.72□□□□□ -1.33
VPS50-213ENST00000477572 TMEM176AQ96HP8 235 aa6.72□□□□□ -1.33
VPS50-213ENST00000477572 DRC1Q96MC2 740 aa6.72□□□□□ -1.33
VPS50-213ENST00000477572 ZNF747Q9BV97 191 aa6.72□□□□□ -1.33
VPS50-213ENST00000477572 SCAND2PQ9GZW5 306 aaPredicted RBP6.72□□□□□ -1.33
VPS50-213ENST00000477572 VPS11Q9H270 941 aa6.72□□□□□ -1.33
VPS50-213ENST00000477572 PCIF1Q9H4Z3 704 aa6.72□□□□□ -1.33
VPS50-213ENST00000477572 CABP5Q9NP86 173 aa6.72□□□□□ -1.33
VPS50-213ENST00000477572 TACR2P21452 398 aa6.71□□□□□ -1.34
VPS50-213ENST00000477572 PTX3P26022 381 aaPredicted RBP6.71□□□□□ -1.34
VPS50-213ENST00000477572 ALDH6A1Q02252 535 aaKnown RBP6.71□□□□□ -1.34
VPS50-213ENST00000477572 DUSP8Q13202 625 aa6.71□□□□□ -1.34
VPS50-213ENST00000477572 NFYCQ13952 458 aa6.71□□□□□ -1.34
VPS50-213ENST00000477572 PRKD1Q15139 912 aaPredicted RBP6.71□□□□□ -1.34
VPS50-213ENST00000477572 ARHGAP44Q17R89 818 aa6.71□□□□□ -1.34
VPS50-213ENST00000477572 NRN1LQ496H8 165 aa6.71□□□□□ -1.34
VPS50-213ENST00000477572 CDCA2Q69YH5 1023 aaPredicted RBP6.71□□□□□ -1.34
VPS50-213ENST00000477572 BCL6BQ8N143 479 aaPredicted RBP6.71□□□□□ -1.34
VPS50-213ENST00000477572 Q8N1X5 172 aa6.71□□□□□ -1.34
VPS50-213ENST00000477572 SLC9A1P19634 815 aa6.7□□□□□ -1.34
VPS50-213ENST00000477572 MSX2P35548 267 aaPredicted RBP6.7□□□□□ -1.34
VPS50-213ENST00000477572 RANGAP1P46060 587 aaPredicted RBP6.7□□□□□ -1.34
VPS50-213ENST00000477572 ANTXR2P58335 489 aa6.7□□□□□ -1.34
VPS50-213ENST00000477572 PABPC4Q13310 644 aaKnown RBP eCLIP6.7□□□□□ -1.34
VPS50-213ENST00000477572 Q6ZSN1 163 aa6.7□□□□□ -1.34
VPS50-213ENST00000477572 GPR135Q8IZ08 494 aa6.7□□□□□ -1.34
VPS50-213ENST00000477572 KIAA1958Q8N8K9 716 aa6.7□□□□□ -1.34
VPS50-213ENST00000477572 EXTL1Q92935 676 aa6.7□□□□□ -1.34
VPS50-213ENST00000477572 AGO3Q9H9G7 860 aaKnown RBP6.7□□□□□ -1.34
VPS50-213ENST00000477572 H7C1D1 291 aa6.69□□□□□ -1.34
VPS50-213ENST00000477572 HGFACQ04756 655 aa6.69□□□□□ -1.34
VPS50-213ENST00000477572 MAP3K12Q12852 859 aa6.69□□□□□ -1.34
VPS50-213ENST00000477572 FOXL1Q12952 345 aa6.69□□□□□ -1.34
VPS50-213ENST00000477572 CFAP100Q494V2 611 aa6.69□□□□□ -1.34
VPS50-213ENST00000477572 USP39Q53GS9 565 aaKnown RBP6.69□□□□□ -1.34
VPS50-213ENST00000477572 SLFN12LQ6IEE8 588 aa6.69□□□□□ -1.34
VPS50-213ENST00000477572 CRIP3Q6Q6R5 217 aa6.69□□□□□ -1.34
VPS50-213ENST00000477572 UBE2R2Q712K3 238 aaPredicted RBP6.69□□□□□ -1.34
VPS50-213ENST00000477572 POLNQ7Z5Q5 900 aa6.69□□□□□ -1.34
VPS50-213ENST00000477572 ZNF808Q8N4W9 903 aaPredicted RBP6.69□□□□□ -1.34
VPS50-213ENST00000477572 FOXB1Q99853 325 aa6.69□□□□□ -1.34
VPS50-213ENST00000477572 ZNF341Q9BYN7 854 aa6.69□□□□□ -1.34
VPS50-213ENST00000477572 SEMA4AQ9H3S1 761 aa6.69□□□□□ -1.34
VPS50-213ENST00000477572 TMEM260Q9NX78 707 aa6.69□□□□□ -1.34
VPS50-213ENST00000477572 TESMINQ9Y4I5 508 aa6.69□□□□□ -1.34
VPS50-213ENST00000477572 CBX4O00257 560 aa6.68□□□□□ -1.34
VPS50-213ENST00000477572 PRLP01236 227 aa6.68□□□□□ -1.34
VPS50-213ENST00000477572 ATP2C1P98194 919 aaPredicted RBP6.68□□□□□ -1.34
VPS50-213ENST00000477572 ROM1Q03395 351 aa6.68□□□□□ -1.34
VPS50-213ENST00000477572 ZNF174Q15697 407 aa6.68□□□□□ -1.34
VPS50-213ENST00000477572 PRAMEF9Q5VWM5 478 aa6.68□□□□□ -1.34
VPS50-213ENST00000477572 ZFPM1Q8IX07 1006 aa6.68□□□□□ -1.34
VPS50-213ENST00000477572 SHCBP1Q8NEM2 672 aa6.68□□□□□ -1.34
VPS50-213ENST00000477572 UBXN4Q92575 508 aa6.68□□□□□ -1.34
VPS50-213ENST00000477572 RNPC3Q96LT9 517 aaKnown RBP6.68□□□□□ -1.34
VPS50-213ENST00000477572 TUBGCP5Q96RT8 1024 aa6.68□□□□□ -1.34
VPS50-213ENST00000477572 ACSS2Q9NR19 701 aa6.68□□□□□ -1.34
VPS50-213ENST00000477572 PLA2G3Q9NZ20 509 aa6.68□□□□□ -1.34
VPS50-213ENST00000477572 H2AFY2Q9P0M6 372 aaPredicted RBP6.68□□□□□ -1.34
VPS50-213ENST00000477572 CD2APQ9Y5K6 639 aa6.68□□□□□ -1.34
VPS50-213ENST00000477572 SLC30A1Q9Y6M5 507 aa6.68□□□□□ -1.34
VPS50-213ENST00000477572 UBA6A0AVT1 1052 aaPredicted RBP6.67□□□□□ -1.34
VPS50-213ENST00000477572 PLSCR1O15162 318 aa6.67□□□□□ -1.34
VPS50-213ENST00000477572 KPNA6O60684 536 aa6.67□□□□□ -1.34
VPS50-213ENST00000477572 FLT3P36888 993 aa6.67□□□□□ -1.34
VPS50-213ENST00000477572 FNTBP49356 437 aa6.67□□□□□ -1.34
VPS50-213ENST00000477572 OR5AN1Q8NGI8 311 aa6.67□□□□□ -1.34
VPS50-213ENST00000477572 MAML3Q96JK9 1138 aa6.67□□□□□ -1.34
VPS50-213ENST00000477572 RPL10LQ96L21 214 aaKnown RBP6.67□□□□□ -1.34
VPS50-213ENST00000477572 ELF4Q99607 663 aaPredicted RBP6.67□□□□□ -1.34
VPS50-213ENST00000477572 SAE1Q9UBE0 346 aaPredicted RBP6.67□□□□□ -1.34
VPS50-213ENST00000477572 B4GALT6Q9UBX8 382 aa6.67□□□□□ -1.34
VPS50-213ENST00000477572 RBM8AQ9Y5S9 174 aaKnown RBP6.67□□□□□ -1.34
VPS50-213ENST00000477572 HS3ST3A1Q9Y663 406 aa6.67□□□□□ -1.34
VPS50-213ENST00000477572 SLC26A4O43511 780 aa6.66□□□□□ -1.34
VPS50-213ENST00000477572 APOL3O95236 402 aa6.66□□□□□ -1.34
VPS50-213ENST00000477572 RPS19P39019 145 aaKnown RBP6.66□□□□□ -1.34
VPS50-213ENST00000477572 NEK4P51957 841 aa6.66□□□□□ -1.34
VPS50-213ENST00000477572 DGCR2P98153 550 aa6.66□□□□□ -1.34
VPS50-213ENST00000477572 SAFB2Q14151 953 aaKnown RBP eCLIP6.66□□□□□ -1.34
VPS50-213ENST00000477572 GRM7Q14831 915 aa6.66□□□□□ -1.34
VPS50-213ENST00000477572 TTC38Q5R3I4 469 aa6.66□□□□□ -1.34
VPS50-213ENST00000477572 RNF207Q6ZRF8 634 aa6.66□□□□□ -1.34
VPS50-213ENST00000477572 NXPE1Q8N323 547 aa6.66□□□□□ -1.34
VPS50-213ENST00000477572 EDAQ92838 391 aa6.66□□□□□ -1.34
VPS50-213ENST00000477572 E2F7Q96AV8 911 aa6.66□□□□□ -1.34
VPS50-213ENST00000477572 TOMM22Q9NS69 142 aa6.66□□□□□ -1.34
VPS50-213ENST00000477572 DENND2AQ9ULE3 1009 aa6.66□□□□□ -1.34
VPS50-213ENST00000477572 C2orf78A6NCI8 922 aa6.65□□□□□ -1.34
VPS50-213ENST00000477572 NPIPB8E9PQR5 432 aa6.65□□□□□ -1.34
VPS50-213ENST00000477572 GDF5P43026 501 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms