RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 TARBP2Q15633 366 aaKnown RBP17.07■□□□□ 0.32
SEC13-215ENST00000477547 LRRC26Q2I0M4 334 aa17.07■□□□□ 0.32
SEC13-215ENST00000477547 FAM126BQ8IXS8 530 aa17.07■□□□□ 0.32
SEC13-215ENST00000477547 KCTD17Q8N5Z5 321 aa17.07■□□□□ 0.32
SEC13-215ENST00000477547 RAD54LQ92698 747 aa17.07■□□□□ 0.32
SEC13-215ENST00000477547 DHX58Q96C10 678 aa17.07■□□□□ 0.32
SEC13-215ENST00000477547 KCNH3Q9ULD8 1083 aa17.07■□□□□ 0.32
SEC13-215ENST00000477547 NOD1Q9Y239 953 aa17.07■□□□□ 0.32
SEC13-215ENST00000477547 ATP11BQ9Y2G3 1177 aa17.07■□□□□ 0.32
SEC13-215ENST00000477547 PRUNE2Q8WUY3 3088 aa17.06■□□□□ 0.32
SEC13-215ENST00000477547 B4GALT4O60513 344 aa17.06■□□□□ 0.32
SEC13-215ENST00000477547 GADD45BO75293 160 aaPredicted RBP17.06■□□□□ 0.32
SEC13-215ENST00000477547 PRPF40AO75400 957 aaKnown RBP17.06■□□□□ 0.32
SEC13-215ENST00000477547 C22orf31O95567 290 aa17.06■□□□□ 0.32
SEC13-215ENST00000477547 XRCC6P12956 609 aaKnown RBP eCLIP17.06■□□□□ 0.32
SEC13-215ENST00000477547 POLGP54098 1239 aaPredicted RBP17.06■□□□□ 0.32
SEC13-215ENST00000477547 ZNF200P98182 395 aaPredicted RBP17.06■□□□□ 0.32
SEC13-215ENST00000477547 PTGISQ16647 500 aa17.06■□□□□ 0.32
SEC13-215ENST00000477547 C1orf53Q5VUE5 145 aa17.06■□□□□ 0.32
SEC13-215ENST00000477547 LARP4BQ92615 738 aaKnown RBP17.06■□□□□ 0.32
SEC13-215ENST00000477547 ZBTB10Q96DT7 871 aa17.06■□□□□ 0.32
SEC13-215ENST00000477547 PYM1Q9BRP8 204 aaKnown RBP17.06■□□□□ 0.32
SEC13-215ENST00000477547 PANK2Q9BZ23 570 aa17.06■□□□□ 0.32
SEC13-215ENST00000477547 BLOC1S4Q9NUP1 217 aa17.06■□□□□ 0.32
SEC13-215ENST00000477547 TRMT13Q9NUP7 481 aaKnown RBP17.06■□□□□ 0.32
SEC13-215ENST00000477547 HPSEQ9Y251 543 aa17.06■□□□□ 0.32
SEC13-215ENST00000477547 PPME1Q9Y570 386 aa17.06■□□□□ 0.32
SEC13-215ENST00000477547 SPTBN5Q9NRC6 3674 aaKnown RBP17.06■□□□□ 0.32
SEC13-215ENST00000477547 FAM237AA0A1B0GTK4 181 aa17.05■□□□□ 0.32
SEC13-215ENST00000477547 MBLAC1A4D2B0 266 aaPredicted RBP17.05■□□□□ 0.32
SEC13-215ENST00000477547 TLR3O15455 904 aaKnown RBP17.05■□□□□ 0.32
SEC13-215ENST00000477547 POLR2DO15514 142 aaKnown RBP17.05■□□□□ 0.32
SEC13-215ENST00000477547 TREHO43280 583 aa17.05■□□□□ 0.32
SEC13-215ENST00000477547 PLA2G4BP0C869 781 aa17.05■□□□□ 0.32
SEC13-215ENST00000477547 RFC5P40937 340 aa17.05■□□□□ 0.32
SEC13-215ENST00000477547 SYKP43405 635 aa17.05■□□□□ 0.32
SEC13-215ENST00000477547 CDK7P50613 346 aa17.05■□□□□ 0.32
SEC13-215ENST00000477547 NDUFA8P51970 172 aa17.05■□□□□ 0.32
SEC13-215ENST00000477547 UBE2HP62256 183 aa17.05■□□□□ 0.32
SEC13-215ENST00000477547 ADAM17P78536 824 aa17.05■□□□□ 0.32
SEC13-215ENST00000477547 EMC2Q15006 297 aa17.05■□□□□ 0.32
SEC13-215ENST00000477547 E2F4Q16254 413 aa17.05■□□□□ 0.32
SEC13-215ENST00000477547 NAALADL2Q58DX5 795 aa17.05■□□□□ 0.32
SEC13-215ENST00000477547 MARCH8Q5T0T0 291 aa17.05■□□□□ 0.32
SEC13-215ENST00000477547 FAM109BQ6ICB4 259 aaPredicted RBP17.05■□□□□ 0.32
SEC13-215ENST00000477547 MTHFD1LQ6UB35 978 aa17.05■□□□□ 0.32
SEC13-215ENST00000477547 SLC7A3Q8WY07 619 aa17.05■□□□□ 0.32
SEC13-215ENST00000477547 CEP89Q96ST8 783 aa17.05■□□□□ 0.32
SEC13-215ENST00000477547 TRPV6Q9H1D0 765 aa17.05■□□□□ 0.32
SEC13-215ENST00000477547 ATP6V0A4Q9HBG4 840 aa17.05■□□□□ 0.32
SEC13-215ENST00000477547 DNAH12Q6ZR08 3092 aa17.04■□□□□ 0.32
SEC13-215ENST00000477547 SCN5AQ14524 2016 aa17.04■□□□□ 0.32
SEC13-215ENST00000477547 CYP2C9P11712 490 aa17.04■□□□□ 0.32
SEC13-215ENST00000477547 KLRC1P26715 233 aa17.04■□□□□ 0.32
SEC13-215ENST00000477547 DHX8Q14562 1220 aaKnown RBP17.04■□□□□ 0.32
SEC13-215ENST00000477547 MCM6Q14566 821 aa17.04■□□□□ 0.32
SEC13-215ENST00000477547 PADI6Q6TGC4 694 aa17.04■□□□□ 0.32
SEC13-215ENST00000477547 ANKRD33Q7Z3H0 272 aa17.04■□□□□ 0.32
SEC13-215ENST00000477547 IQUBQ8NA54 791 aa17.04■□□□□ 0.32
SEC13-215ENST00000477547 MTRQ99707 1265 aa17.04■□□□□ 0.32
SEC13-215ENST00000477547 CUEDC2Q9H467 287 aa17.04■□□□□ 0.32
SEC13-215ENST00000477547 PRDM6Q9NQX0 595 aa17.04■□□□□ 0.32
SEC13-215ENST00000477547 DCDC2CA8MYV0 355 aa17.03■□□□□ 0.32
SEC13-215ENST00000477547 MAGEB2O15479 319 aa17.03■□□□□ 0.32
SEC13-215ENST00000477547 DGAT1O75907 488 aa17.03■□□□□ 0.32
SEC13-215ENST00000477547 CLCN3P51790 818 aa17.03■□□□□ 0.32
SEC13-215ENST00000477547 SLC12A3P55017 1021 aa17.03■□□□□ 0.32
SEC13-215ENST00000477547 TLE2Q04725 743 aa17.03■□□□□ 0.32
SEC13-215ENST00000477547 FAM160A1Q05DH4 1040 aa17.03■□□□□ 0.32
SEC13-215ENST00000477547 TAF2Q6P1X5 1199 aa17.03■□□□□ 0.32
SEC13-215ENST00000477547 RUFY4Q6ZNE9 571 aa17.03■□□□□ 0.32
SEC13-215ENST00000477547 SERINC5Q86VE9 423 aa17.03■□□□□ 0.32
SEC13-215ENST00000477547 GPBP1Q86WP2 473 aa17.03■□□□□ 0.32
SEC13-215ENST00000477547 LRRC71Q8N4P6 559 aa17.03■□□□□ 0.32
SEC13-215ENST00000477547 METTL13Q8N6R0 699 aa17.03■□□□□ 0.32
SEC13-215ENST00000477547 SYT2Q8N9I0 419 aaPredicted RBP17.03■□□□□ 0.32
SEC13-215ENST00000477547 RETREG2Q8NC44 543 aa17.03■□□□□ 0.32
SEC13-215ENST00000477547 CTAGE1Q96RT6 745 aa17.03■□□□□ 0.32
SEC13-215ENST00000477547 JPH2Q9BR39 696 aaPredicted RBP17.03■□□□□ 0.32
SEC13-215ENST00000477547 RUSC1Q9BVN2 902 aa17.03■□□□□ 0.32
SEC13-215ENST00000477547 FAM49AQ9H0Q0 323 aaPredicted RBP17.03■□□□□ 0.32
SEC13-215ENST00000477547 DHX33Q9H6R0 707 aaKnown RBP17.03■□□□□ 0.32
SEC13-215ENST00000477547 MAGEF1Q9HAY2 307 aa17.03■□□□□ 0.32
SEC13-215ENST00000477547 ACTN4O43707 911 aaKnown RBP17.02■□□□□ 0.32
SEC13-215ENST00000477547 GAS2O43903 313 aaKnown RBP17.02■□□□□ 0.32
SEC13-215ENST00000477547 MAFO75444 373 aaPredicted RBP17.02■□□□□ 0.32
SEC13-215ENST00000477547 CD4P01730 458 aa17.02■□□□□ 0.32
SEC13-215ENST00000477547 PTK7Q13308 1070 aa17.02■□□□□ 0.32
SEC13-215ENST00000477547 CEP57L1Q8IYX8 460 aa17.02■□□□□ 0.32
SEC13-215ENST00000477547 MCPH1Q8NEM0 835 aa17.02■□□□□ 0.32
SEC13-215ENST00000477547 TOX2Q96NM4 488 aa17.02■□□□□ 0.32
SEC13-215ENST00000477547 SUGCTQ9HAC7 445 aa17.02■□□□□ 0.32
SEC13-215ENST00000477547 XPNPEP1Q9NQW7 623 aa17.02■□□□□ 0.32
SEC13-215ENST00000477547 LMBRD1Q9NUN5 540 aa17.02■□□□□ 0.32
SEC13-215ENST00000477547 USP25Q9UHP3 1055 aa17.02■□□□□ 0.32
SEC13-215ENST00000477547 PCDHA2Q9Y5H9 948 aa17.02■□□□□ 0.32
SEC13-215ENST00000477547 SMIM35A0A1B0GVV1 85 aa17.01■□□□□ 0.31
SEC13-215ENST00000477547 CLTBP09497 229 aa17.01■□□□□ 0.31
SEC13-215ENST00000477547 LIG1P18858 919 aa17.01■□□□□ 0.31
SEC13-215ENST00000477547 EFCAB12Q6NXP0 572 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms