RNA–Protein interactions for RNA: ENST00000477489.1

LDB3-206, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best)

Gene LDB3, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-206ENST00000477489 EPM2AIP1Q7L775 607 aaPredicted RBP7.37□□□□□ -1.23
LDB3-206ENST00000477489 DYMQ7RTS9 669 aa7.37□□□□□ -1.23
LDB3-206ENST00000477489 ARMC9Q7Z3E5 817 aa7.37□□□□□ -1.23
LDB3-206ENST00000477489 PRRT2Q7Z6L0 340 aaPredicted RBP7.37□□□□□ -1.23
LDB3-206ENST00000477489 IRF2BP1Q8IU81 584 aa7.37□□□□□ -1.23
LDB3-206ENST00000477489 RIOX2Q8IUF8 465 aa7.37□□□□□ -1.23
LDB3-206ENST00000477489 CPXCR1Q8N123 301 aa7.37□□□□□ -1.23
LDB3-206ENST00000477489 FAM160A2Q8N612 972 aaPredicted RBP7.37□□□□□ -1.23
LDB3-206ENST00000477489 TC2NQ8N9U0 490 aa7.37□□□□□ -1.23
LDB3-206ENST00000477489 ZNF507Q8TCN5 953 aa7.37□□□□□ -1.23
LDB3-206ENST00000477489 TBC1D5Q92609 795 aa7.37□□□□□ -1.23
LDB3-206ENST00000477489 KCNN1Q92952 543 aa7.37□□□□□ -1.23
LDB3-206ENST00000477489 CNOT6LQ96LI5 555 aaKnown RBP7.37□□□□□ -1.23
LDB3-206ENST00000477489 INPP4AQ96PE3 977 aaPredicted RBP7.37□□□□□ -1.23
LDB3-206ENST00000477489 TUBGCP2Q9BSJ2 902 aa7.37□□□□□ -1.23
LDB3-206ENST00000477489 MKNK1Q9BUB5 465 aa7.37□□□□□ -1.23
LDB3-206ENST00000477489 NUCKS1Q9H1E3 243 aaKnown RBP7.37□□□□□ -1.23
LDB3-206ENST00000477489 ST6GALNAC4Q9H4F1 302 aa7.37□□□□□ -1.23
LDB3-206ENST00000477489 C17orf75Q9HAS0 396 aa7.37□□□□□ -1.23
LDB3-206ENST00000477489 PARVGQ9HBI0 331 aa7.37□□□□□ -1.23
LDB3-206ENST00000477489 METTL14Q9HCE5 456 aaKnown RBP7.37□□□□□ -1.23
LDB3-206ENST00000477489 ANKEF1Q9NU02 776 aa7.37□□□□□ -1.23
LDB3-206ENST00000477489 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.37□□□□□ -1.23
LDB3-206ENST00000477489 SLC45A1Q9Y2W3 748 aa7.37□□□□□ -1.23
LDB3-206ENST00000477489 PPME1Q9Y570 386 aa7.37□□□□□ -1.23
LDB3-206ENST00000477489 THSD7BQ9C0I4 1608 aa7.37□□□□□ -1.23
LDB3-206ENST00000477489 MYH11P35749 1972 aa7.37□□□□□ -1.23
LDB3-206ENST00000477489 CETN3O15182 167 aa7.36□□□□□ -1.23
LDB3-206ENST00000477489 DHX15O43143 795 aaKnown RBP7.36□□□□□ -1.23
LDB3-206ENST00000477489 FAM13AO94988 1023 aa7.36□□□□□ -1.23
LDB3-206ENST00000477489 SSBP05455 408 aaKnown RBP eCLIP7.36□□□□□ -1.23
LDB3-206ENST00000477489 NR3C2P08235 984 aa7.36□□□□□ -1.23
LDB3-206ENST00000477489 ARP10275 920 aa7.36□□□□□ -1.23
LDB3-206ENST00000477489 MTIF2P46199 727 aaKnown RBP7.36□□□□□ -1.23
LDB3-206ENST00000477489 PSMC5P62195 406 aa7.36□□□□□ -1.23
LDB3-206ENST00000477489 MRPS9P82933 396 aaKnown RBP7.36□□□□□ -1.23
LDB3-206ENST00000477489 PRR20EP86478 221 aa7.36□□□□□ -1.23
LDB3-206ENST00000477489 PRR20CP86479 221 aa7.36□□□□□ -1.23
LDB3-206ENST00000477489 PRR20DP86480 221 aa7.36□□□□□ -1.23
LDB3-206ENST00000477489 PRR20BP86481 221 aa7.36□□□□□ -1.23
LDB3-206ENST00000477489 PRR20AP86496 221 aa7.36□□□□□ -1.23
LDB3-206ENST00000477489 UBXN1Q04323 297 aa7.36□□□□□ -1.23
LDB3-206ENST00000477489 TMEM132BQ14DG7 1078 aa7.36□□□□□ -1.23
LDB3-206ENST00000477489 PTPN14Q15678 1187 aa7.36□□□□□ -1.23
LDB3-206ENST00000477489 KNOP1Q1ED39 458 aaKnown RBP7.36□□□□□ -1.23
LDB3-206ENST00000477489 ARSHQ5FYA8 562 aa7.36□□□□□ -1.23
LDB3-206ENST00000477489 MUM1L1Q5H9M0 696 aa7.36□□□□□ -1.23
LDB3-206ENST00000477489 DNTTIP2Q5QJE6 756 aaKnown RBP7.36□□□□□ -1.23
LDB3-206ENST00000477489 RINT1Q6NUQ1 792 aa7.36□□□□□ -1.23
LDB3-206ENST00000477489 KCNV1Q6PIU1 500 aa7.36□□□□□ -1.23
LDB3-206ENST00000477489 LRRC55Q6ZSA7 311 aa7.36□□□□□ -1.23
LDB3-206ENST00000477489 C1orf186Q6ZWK4 172 aa7.36□□□□□ -1.23
LDB3-206ENST00000477489 MIER3Q7Z3K6 550 aa7.36□□□□□ -1.23
LDB3-206ENST00000477489 FRMD5Q7Z6J6 570 aa7.36□□□□□ -1.23
LDB3-206ENST00000477489 FMNL3Q8IVF7 1028 aa7.36□□□□□ -1.23
LDB3-206ENST00000477489 SHCBP1Q8NEM2 672 aa7.36□□□□□ -1.23
LDB3-206ENST00000477489 ZNF397Q8NF99 534 aaPredicted RBP7.36□□□□□ -1.23
LDB3-206ENST00000477489 CYP2W1Q8TAV3 490 aa7.36□□□□□ -1.23
LDB3-206ENST00000477489 SCFD1Q8WVM8 642 aa7.36□□□□□ -1.23
LDB3-206ENST00000477489 ATP6V0A1Q93050 837 aa7.36□□□□□ -1.23
LDB3-206ENST00000477489 HVCN1Q96D96 273 aa7.36□□□□□ -1.23
LDB3-206ENST00000477489 CDCA5Q96FF9 252 aa7.36□□□□□ -1.23
LDB3-206ENST00000477489 REEP2Q9BRK0 252 aa7.36□□□□□ -1.23
LDB3-206ENST00000477489 LXNQ9BS40 222 aa7.36□□□□□ -1.23
LDB3-206ENST00000477489 NOC4LQ9BVI4 516 aaKnown RBP7.36□□□□□ -1.23
LDB3-206ENST00000477489 MCOLN1Q9GZU1 580 aa7.36□□□□□ -1.23
LDB3-206ENST00000477489 BHMT2Q9H2M3 363 aa7.36□□□□□ -1.23
LDB3-206ENST00000477489 KCTD10Q9H3F6 313 aa7.36□□□□□ -1.23
LDB3-206ENST00000477489 SEMA6BQ9H3T3 888 aa7.36□□□□□ -1.23
LDB3-206ENST00000477489 UNC45AQ9H3U1 944 aa7.36□□□□□ -1.23
LDB3-206ENST00000477489 SLC39A2Q9NP94 309 aa7.36□□□□□ -1.23
LDB3-206ENST00000477489 TYW1Q9NV66 732 aaKnown RBP7.36□□□□□ -1.23
LDB3-206ENST00000477489 ZNHIT6Q9NWK9 470 aaKnown RBP7.36□□□□□ -1.23
LDB3-206ENST00000477489 CYP39A1Q9NYL5 469 aa7.36□□□□□ -1.23
LDB3-206ENST00000477489 COL20A1Q9P218 1284 aa7.36□□□□□ -1.23
LDB3-206ENST00000477489 AGTPBP1Q9UPW5 1226 aa7.36□□□□□ -1.23
LDB3-206ENST00000477489 WDR81Q562E7 1941 aa7.36□□□□□ -1.23
LDB3-206ENST00000477489 KIAA1217Q5T5P2 1943 aa7.35□□□□□ -1.23
LDB3-206ENST00000477489 PASKQ96RG2 1323 aa7.35□□□□□ -1.23
LDB3-206ENST00000477489 ARHGEF35A5YM69 484 aa7.35□□□□□ -1.23
LDB3-206ENST00000477489 TRIM49BA6NDI0 452 aa7.35□□□□□ -1.23
LDB3-206ENST00000477489 H0YCG3 227 aa7.35□□□□□ -1.23
LDB3-206ENST00000477489 EML1O00423 815 aa7.35□□□□□ -1.23
LDB3-206ENST00000477489 TEX33O43247 280 aa7.35□□□□□ -1.23
LDB3-206ENST00000477489 EIF3JO75822 258 aaKnown RBP7.35□□□□□ -1.23
LDB3-206ENST00000477489 CCDC175P0C221 793 aa7.35□□□□□ -1.23
LDB3-206ENST00000477489 TGFB3P10600 412 aa7.35□□□□□ -1.23
LDB3-206ENST00000477489 HNRNPH3P31942 346 aaKnown RBP7.35□□□□□ -1.23
LDB3-206ENST00000477489 PMS1P54277 932 aaKnown RBP7.35□□□□□ -1.23
LDB3-206ENST00000477489 RTP1P59025 263 aa7.35□□□□□ -1.23
LDB3-206ENST00000477489 IRX3P78415 501 aaPredicted RBP7.35□□□□□ -1.23
LDB3-206ENST00000477489 ZBED6P86452 979 aa7.35□□□□□ -1.23
LDB3-206ENST00000477489 MAP2K1Q02750 393 aaPredicted RBP7.35□□□□□ -1.23
LDB3-206ENST00000477489 ENPEPQ07075 957 aa7.35□□□□□ -1.23
LDB3-206ENST00000477489 TBC1D8BQ0IIM8 1120 aa7.35□□□□□ -1.23
LDB3-206ENST00000477489 BAATQ14032 418 aaPredicted RBP7.35□□□□□ -1.23
LDB3-206ENST00000477489 MSS51Q4VC12 460 aa7.35□□□□□ -1.23
LDB3-206ENST00000477489 VWA3BQ502W6 1294 aa7.35□□□□□ -1.23
LDB3-206ENST00000477489 LDLRAD1Q5T700 205 aa7.35□□□□□ -1.23
LDB3-206ENST00000477489 CYP26C1Q6V0L0 522 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms