RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 PRR33A8MZF0 331 aa12.86□□□□□ -0.35
HDLBP-236ENST00000477477 WDR64B1ANS9 1081 aa12.86□□□□□ -0.35
HDLBP-236ENST00000477477 MAGEB2O15479 319 aa12.86□□□□□ -0.35
HDLBP-236ENST00000477477 DCXO43602 365 aa12.86□□□□□ -0.35
HDLBP-236ENST00000477477 EDIL3O43854 480 aa12.86□□□□□ -0.35
HDLBP-236ENST00000477477 REC8O95072 547 aa12.86□□□□□ -0.35
HDLBP-236ENST00000477477 PDIA3P30101 505 aaKnown RBP12.86□□□□□ -0.35
HDLBP-236ENST00000477477 CLCN3P51790 818 aa12.86□□□□□ -0.35
HDLBP-236ENST00000477477 EVCP57679 992 aa12.86□□□□□ -0.35
HDLBP-236ENST00000477477 ADAM15Q13444 863 aa12.86□□□□□ -0.35
HDLBP-236ENST00000477477 SMAD4Q13485 552 aaKnown RBP12.86□□□□□ -0.35
HDLBP-236ENST00000477477 SMAD2Q15796 467 aaKnown RBP12.86□□□□□ -0.35
HDLBP-236ENST00000477477 TRMT1LQ7Z2T5 733 aaKnown RBP12.86□□□□□ -0.35
HDLBP-236ENST00000477477 METTL13Q8N6R0 699 aa12.86□□□□□ -0.35
HDLBP-236ENST00000477477 NCOA5Q9HCD5 579 aaKnown RBP12.86□□□□□ -0.35
HDLBP-236ENST00000477477 CD207Q9UJ71 328 aa12.86□□□□□ -0.35
HDLBP-236ENST00000477477 MSH4O15457 936 aa12.85□□□□□ -0.35
HDLBP-236ENST00000477477 ZNF862O60290 1169 aa12.85□□□□□ -0.35
HDLBP-236ENST00000477477 OATP04181 439 aa12.85□□□□□ -0.35
HDLBP-236ENST00000477477 NDUFV1P49821 464 aa12.85□□□□□ -0.35
HDLBP-236ENST00000477477 CCT2P78371 535 aaKnown RBP12.85□□□□□ -0.35
HDLBP-236ENST00000477477 PRKCEQ02156 737 aa12.85□□□□□ -0.35
HDLBP-236ENST00000477477 UBE3AQ05086 875 aa12.85□□□□□ -0.35
HDLBP-236ENST00000477477 DSC3Q14574 896 aa12.85□□□□□ -0.35
HDLBP-236ENST00000477477 SPOUT1Q5T280 376 aaKnown RBP12.85□□□□□ -0.35
HDLBP-236ENST00000477477 FAM102BQ5T8I3 360 aa12.85□□□□□ -0.35
HDLBP-236ENST00000477477 LINC01465Q8N7H1 131 aa12.85□□□□□ -0.35
HDLBP-236ENST00000477477 EFHBQ8N7U6 833 aa12.85□□□□□ -0.35
HDLBP-236ENST00000477477 CCDC136Q96JN2 1154 aa12.85□□□□□ -0.35
HDLBP-236ENST00000477477 MSLNLQ96KJ4 702 aa12.85□□□□□ -0.35
HDLBP-236ENST00000477477 MAP7D2Q96T17 732 aa12.85□□□□□ -0.35
HDLBP-236ENST00000477477 POP1Q99575 1024 aaKnown RBP12.85□□□□□ -0.35
HDLBP-236ENST00000477477 ELAC1Q9H777 363 aaKnown RBP12.85□□□□□ -0.35
HDLBP-236ENST00000477477 ATP6V0A4Q9HBG4 840 aa12.85□□□□□ -0.35
HDLBP-236ENST00000477477 SH3GLB2Q9NR46 395 aa12.85□□□□□ -0.35
HDLBP-236ENST00000477477 AAASQ9NRG9 546 aa12.85□□□□□ -0.35
HDLBP-236ENST00000477477 DISC1Q9NRI5 854 aa12.85□□□□□ -0.35
HDLBP-236ENST00000477477 TMEM161AQ9NX61 479 aa12.85□□□□□ -0.35
HDLBP-236ENST00000477477 HCSTQ9UBK5 93 aa12.85□□□□□ -0.35
HDLBP-236ENST00000477477 AKT3Q9Y243 479 aa12.85□□□□□ -0.35
HDLBP-236ENST00000477477 PCDHB12Q9Y5F1 795 aa12.85□□□□□ -0.35
HDLBP-236ENST00000477477 KIAA1671Q9BY89 1806 aa12.84□□□□□ -0.35
HDLBP-236ENST00000477477 GAS7O60861 476 aa12.84□□□□□ -0.35
HDLBP-236ENST00000477477 EYA4O95677 639 aa12.84□□□□□ -0.35
HDLBP-236ENST00000477477 FGFR1P11362 822 aa12.84□□□□□ -0.35
HDLBP-236ENST00000477477 TMOD1P28289 359 aa12.84□□□□□ -0.35
HDLBP-236ENST00000477477 NRIP1P48552 1158 aa12.84□□□□□ -0.35
HDLBP-236ENST00000477477 USP11P51784 963 aa12.84□□□□□ -0.35
HDLBP-236ENST00000477477 NLRP5P59047 1200 aa12.84□□□□□ -0.35
HDLBP-236ENST00000477477 FAM189BP81408 668 aa12.84□□□□□ -0.35
HDLBP-236ENST00000477477 TOB2Q14106 344 aaPredicted RBP12.84□□□□□ -0.35
HDLBP-236ENST00000477477 UGCGQ16739 394 aa12.84□□□□□ -0.35
HDLBP-236ENST00000477477 EFCAB12Q6NXP0 572 aa12.84□□□□□ -0.35
HDLBP-236ENST00000477477 ZNF710Q8N1W2 664 aa12.84□□□□□ -0.35
HDLBP-236ENST00000477477 LRRC71Q8N4P6 559 aa12.84□□□□□ -0.35
HDLBP-236ENST00000477477 SLC5A5Q92911 643 aa12.84□□□□□ -0.35
HDLBP-236ENST00000477477 RIT2Q99578 217 aa12.84□□□□□ -0.35
HDLBP-236ENST00000477477 TEKT3Q9BXF9 490 aa12.84□□□□□ -0.35
HDLBP-236ENST00000477477 UPF3BQ9BZI7 483 aaKnown RBP12.84□□□□□ -0.35
HDLBP-236ENST00000477477 ADAMTS10Q9H324 1103 aa12.84□□□□□ -0.35
HDLBP-236ENST00000477477 UNC45AQ9H3U1 944 aa12.84□□□□□ -0.35
HDLBP-236ENST00000477477 CLEC1BQ9P126 229 aa12.84□□□□□ -0.35
HDLBP-236ENST00000477477 PCDHGC5Q9Y5F6 944 aa12.84□□□□□ -0.35
HDLBP-236ENST00000477477 EPB41L2O43491 1005 aaKnown RBP12.83□□□□□ -0.36
HDLBP-236ENST00000477477 CHMP2AO43633 222 aa12.83□□□□□ -0.36
HDLBP-236ENST00000477477 FGF18O76093 207 aa12.83□□□□□ -0.36
HDLBP-236ENST00000477477 GLP2RO95838 553 aa12.83□□□□□ -0.36
HDLBP-236ENST00000477477 LAG3P18627 525 aa12.83□□□□□ -0.36
HDLBP-236ENST00000477477 SFNP31947 248 aa12.83□□□□□ -0.36
HDLBP-236ENST00000477477 JAK3P52333 1124 aa12.83□□□□□ -0.36
HDLBP-236ENST00000477477 NLRP11P59045 1033 aaKnown RBP12.83□□□□□ -0.36
HDLBP-236ENST00000477477 CSPP1Q1MSJ5 1256 aa12.83□□□□□ -0.36
HDLBP-236ENST00000477477 LRCH2Q5VUJ6 765 aa12.83□□□□□ -0.36
HDLBP-236ENST00000477477 RUFY3Q7L099 469 aa12.83□□□□□ -0.36
HDLBP-236ENST00000477477 RBM23Q86U06 439 aaKnown RBP12.83□□□□□ -0.36
HDLBP-236ENST00000477477 TRIM22Q8IYM9 498 aa12.83□□□□□ -0.36
HDLBP-236ENST00000477477 COLGALT1Q8NBJ5 622 aa12.83□□□□□ -0.36
HDLBP-236ENST00000477477 SMRP1Q8NCR6 262 aa12.83□□□□□ -0.36
HDLBP-236ENST00000477477 TBCKQ8TEA7 893 aa12.83□□□□□ -0.36
HDLBP-236ENST00000477477 C22orf23Q9BZE7 217 aa12.83□□□□□ -0.36
HDLBP-236ENST00000477477 TMEM117Q9H0C3 514 aa12.83□□□□□ -0.36
HDLBP-236ENST00000477477 CWH43Q9H720 699 aa12.83□□□□□ -0.36
HDLBP-236ENST00000477477 ZSWIM6Q9HCJ5 1215 aa12.83□□□□□ -0.36
HDLBP-236ENST00000477477 TLR9Q9NR96 1032 aa12.83□□□□□ -0.36
HDLBP-236ENST00000477477 NRBP2Q9NSY0 501 aa12.83□□□□□ -0.36
HDLBP-236ENST00000477477 TYW1Q9NV66 732 aaKnown RBP12.83□□□□□ -0.36
HDLBP-236ENST00000477477 LOXHD1Q8IVV2 1947 aa12.82□□□□□ -0.36
HDLBP-236ENST00000477477 HOXA2O43364 376 aa12.82□□□□□ -0.36
HDLBP-236ENST00000477477 PSMD10O75832 226 aa12.82□□□□□ -0.36
HDLBP-236ENST00000477477 DEXIO95424 95 aa12.82□□□□□ -0.36
HDLBP-236ENST00000477477 TDP2O95551 362 aa12.82□□□□□ -0.36
HDLBP-236ENST00000477477 EIF4BP23588 611 aaKnown RBP12.82□□□□□ -0.36
HDLBP-236ENST00000477477 GPC3P51654 580 aa12.82□□□□□ -0.36
HDLBP-236ENST00000477477 SSRP1Q08945 709 aaKnown RBP12.82□□□□□ -0.36
HDLBP-236ENST00000477477 COASYQ13057 564 aa12.82□□□□□ -0.36
HDLBP-236ENST00000477477 TARBP2Q15633 366 aaKnown RBP12.82□□□□□ -0.36
HDLBP-236ENST00000477477 Q4G0T1 1027 aa12.82□□□□□ -0.36
HDLBP-236ENST00000477477 THNSL1Q8IYQ7 743 aa12.82□□□□□ -0.36
HDLBP-236ENST00000477477 RDM1Q8NG50 284 aa12.82□□□□□ -0.36
HDLBP-236ENST00000477477 MICAL1Q8TDZ2 1067 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms