RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 URGCPQ8TCY9 931 aa19.9■□□□□ 0.78
VARS2-209ENST00000477288 BSDC1Q9NW68 430 aaPredicted RBP19.9■□□□□ 0.78
VARS2-209ENST00000477288 GDAQ9Y2T3 454 aa19.9■□□□□ 0.78
VARS2-209ENST00000477288 ZNF521Q96K83 1311 aa19.9■□□□□ 0.78
VARS2-209ENST00000477288 SASH1O94885 1247 aa19.9■□□□□ 0.78
VARS2-209ENST00000477288 MYL1P05976 194 aa19.9■□□□□ 0.78
VARS2-209ENST00000477288 TSPY1Q01534 308 aa19.9■□□□□ 0.78
VARS2-209ENST00000477288 SRRM1Q8IYB3 904 aaKnown RBP19.9■□□□□ 0.78
VARS2-209ENST00000477288 LDHAP00338 332 aaKnown RBP19.9■□□□□ 0.78
VARS2-209ENST00000477288 RASGRF1Q13972 1273 aa19.9■□□□□ 0.78
VARS2-209ENST00000477288 TAF11Q15544 211 aa19.9■□□□□ 0.78
VARS2-209ENST00000477288 TRIM15Q9C019 465 aa19.9■□□□□ 0.78
VARS2-209ENST00000477288 SNX2O60749 519 aa19.9■□□□□ 0.78
VARS2-209ENST00000477288 PAMP19021 973 aa19.9■□□□□ 0.78
VARS2-209ENST00000477288 C11orf57Q6ZUT1 292 aaPredicted RBP19.9■□□□□ 0.78
VARS2-209ENST00000477288 BZW1Q7L1Q6 419 aaKnown RBP19.9■□□□□ 0.78
VARS2-209ENST00000477288 PIGBQ92521 554 aa19.9■□□□□ 0.78
VARS2-209ENST00000477288 IFT43Q96FT9 208 aa19.9■□□□□ 0.78
VARS2-209ENST00000477288 PIDD1Q9HB75 910 aa19.9■□□□□ 0.78
VARS2-209ENST00000477288 STAP2Q9UGK3 403 aa19.9■□□□□ 0.78
VARS2-209ENST00000477288 MID2Q9UJV3 735 aa19.9■□□□□ 0.78
VARS2-209ENST00000477288 ANP32DO95626 131 aa19.9■□□□□ 0.78
VARS2-209ENST00000477288 ZBTB17Q13105 803 aa19.9■□□□□ 0.78
VARS2-209ENST00000477288 UPF3AQ9H1J1 476 aaKnown RBP19.9■□□□□ 0.78
VARS2-209ENST00000477288 HPCAL4Q9UM19 191 aa19.9■□□□□ 0.78
VARS2-209ENST00000477288 TAF1BQ53T94 588 aaPredicted RBP19.89■□□□□ 0.78
VARS2-209ENST00000477288 AP1ARQ63HQ0 302 aa19.89■□□□□ 0.78
VARS2-209ENST00000477288 DCAF4Q8WV16 495 aa19.89■□□□□ 0.78
VARS2-209ENST00000477288 NRBF2Q96F24 287 aa19.89■□□□□ 0.78
VARS2-209ENST00000477288 RMDN3Q96TC7 470 aa19.89■□□□□ 0.78
VARS2-209ENST00000477288 SAMSN1Q9NSI8 373 aaKnown RBP19.89■□□□□ 0.78
VARS2-209ENST00000477288 PCDHA6Q9UN73 950 aa19.89■□□□□ 0.78
VARS2-209ENST00000477288 PCDHA8Q9Y5H6 950 aa19.89■□□□□ 0.78
VARS2-209ENST00000477288 PALLDQ8WX93 1383 aa19.89■□□□□ 0.78
VARS2-209ENST00000477288 ACSL3O95573 720 aa19.89■□□□□ 0.77
VARS2-209ENST00000477288 CENPUQ71F23 418 aa19.89■□□□□ 0.77
VARS2-209ENST00000477288 HOXC10Q9NYD6 342 aa19.89■□□□□ 0.77
VARS2-209ENST00000477288 ANGPTL2Q9UKU9 493 aa19.89■□□□□ 0.77
VARS2-209ENST00000477288 PRDM15P57071 1507 aaPredicted RBP19.89■□□□□ 0.77
VARS2-209ENST00000477288 CCNE1P24864 410 aa19.89■□□□□ 0.77
VARS2-209ENST00000477288 AFG1LQ8WV93 481 aa19.89■□□□□ 0.77
VARS2-209ENST00000477288 LZICQ8WZA0 190 aa19.89■□□□□ 0.77
VARS2-209ENST00000477288 PAGE5Q96GU1 130 aa19.89■□□□□ 0.77
VARS2-209ENST00000477288 TSR3Q9UJK0 312 aaKnown RBP19.89■□□□□ 0.77
VARS2-209ENST00000477288 IFNA8P32881 189 aa19.89■□□□□ 0.77
VARS2-209ENST00000477288 GRAMD1BQ3KR37 738 aa19.89■□□□□ 0.77
VARS2-209ENST00000477288 SNRNP48Q6IEG0 339 aaKnown RBP19.89■□□□□ 0.77
VARS2-209ENST00000477288 TOPORSQ9NS56 1045 aaPredicted RBP19.89■□□□□ 0.77
VARS2-209ENST00000477288 SUN2Q9UH99 717 aa19.89■□□□□ 0.77
VARS2-209ENST00000477288 CLDN3O15551 220 aa19.89■□□□□ 0.77
VARS2-209ENST00000477288 PYGLP06737 847 aa19.89■□□□□ 0.77
VARS2-209ENST00000477288 HUS1O60921 280 aa19.88■□□□□ 0.77
VARS2-209ENST00000477288 POLE2P56282 527 aa19.88■□□□□ 0.77
VARS2-209ENST00000477288 TNFAIP2Q03169 654 aa19.88■□□□□ 0.77
VARS2-209ENST00000477288 ZMYND12Q9H0C1 365 aa19.88■□□□□ 0.77
VARS2-209ENST00000477288 NEUROG2Q9H2A3 272 aa19.88■□□□□ 0.77
VARS2-209ENST00000477288 SCOCQ9UIL1 159 aa19.88■□□□□ 0.77
VARS2-209ENST00000477288 PLEKHA8P1O95397 391 aa19.88■□□□□ 0.77
VARS2-209ENST00000477288 CA4P22748 312 aa19.88■□□□□ 0.77
VARS2-209ENST00000477288 PHKA2P46019 1235 aa19.88■□□□□ 0.77
VARS2-209ENST00000477288 KIAA1755Q5JYT7 1200 aa19.88■□□□□ 0.77
VARS2-209ENST00000477288 TUBB6Q9BUF5 446 aa19.88■□□□□ 0.77
VARS2-209ENST00000477288 FSD1LQ9BXM9 530 aa19.88■□□□□ 0.77
VARS2-209ENST00000477288 ATG3Q9NT62 314 aa19.88■□□□□ 0.77
VARS2-209ENST00000477288 KLHL8Q9P2G9 620 aaPredicted RBP19.88■□□□□ 0.77
VARS2-209ENST00000477288 F5H423 210 aaPredicted RBP19.88■□□□□ 0.77
VARS2-209ENST00000477288 E2F6O75461 281 aa19.88■□□□□ 0.77
VARS2-209ENST00000477288 RPAINQ86UA6 219 aa19.88■□□□□ 0.77
VARS2-209ENST00000477288 TEX2Q8IWB9 1127 aa19.88■□□□□ 0.77
VARS2-209ENST00000477288 TDRD3Q9H7E2 651 aaKnown RBP19.88■□□□□ 0.77
VARS2-209ENST00000477288 SCINQ9Y6U3 715 aa19.88■□□□□ 0.77
VARS2-209ENST00000477288 ABCB11O95342 1321 aa19.88■□□□□ 0.77
VARS2-209ENST00000477288 ERBB3P21860 1342 aa19.88■□□□□ 0.77
VARS2-209ENST00000477288 HEG1Q9ULI3 1381 aa19.88■□□□□ 0.77
VARS2-209ENST00000477288 CDC25BP30305 580 aa19.88■□□□□ 0.77
VARS2-209ENST00000477288 MXD4Q14582 209 aaPredicted RBP19.88■□□□□ 0.77
VARS2-209ENST00000477288 ZNF568Q3ZCX4 644 aa19.88■□□□□ 0.77
VARS2-209ENST00000477288 GIMAP8Q8ND71 665 aaPredicted RBP19.88■□□□□ 0.77
VARS2-209ENST00000477288 TTC17Q96AE7 1141 aa19.88■□□□□ 0.77
VARS2-209ENST00000477288 VPS39Q96JC1 886 aa19.88■□□□□ 0.77
VARS2-209ENST00000477288 HECW2Q9P2P5 1572 aa19.88■□□□□ 0.77
VARS2-209ENST00000477288 FAM95CA0A1B0GW59 222 aa19.88■□□□□ 0.77
VARS2-209ENST00000477288 BLVRAP53004 296 aa19.88■□□□□ 0.77
VARS2-209ENST00000477288 HDLBPQ00341 1268 aaKnown RBP19.88■□□□□ 0.77
VARS2-209ENST00000477288 FAM167AQ96KS9 214 aa19.88■□□□□ 0.77
VARS2-209ENST00000477288 SARS2Q9NP81 518 aaKnown RBP19.88■□□□□ 0.77
VARS2-209ENST00000477288 PRDM5Q9NQX1 630 aaPredicted RBP19.88■□□□□ 0.77
VARS2-209ENST00000477288 MAPK6Q16659 721 aa19.87■□□□□ 0.77
VARS2-209ENST00000477288 ZC3H12BQ5HYM0 836 aaKnown RBP19.87■□□□□ 0.77
VARS2-209ENST00000477288 PASD1Q8IV76 773 aa19.87■□□□□ 0.77
VARS2-209ENST00000477288 NEK9Q8TD19 979 aa19.87■□□□□ 0.77
VARS2-209ENST00000477288 USP17L5A8MUK1 530 aa19.87■□□□□ 0.77
VARS2-209ENST00000477288 SRPRBQ9Y5M8 271 aaKnown RBP19.87■□□□□ 0.77
VARS2-209ENST00000477288 ECE2O60344 883 aa19.87■□□□□ 0.77
VARS2-209ENST00000477288 IFNAR1P17181 557 aa19.87■□□□□ 0.77
VARS2-209ENST00000477288 PTK2BQ14289 1009 aa19.87■□□□□ 0.77
VARS2-209ENST00000477288 PDIK1LQ8N165 341 aa19.87■□□□□ 0.77
VARS2-209ENST00000477288 PLA2R1Q13018 1463 aa19.87■□□□□ 0.77
VARS2-209ENST00000477288 IKBKBO14920 756 aa19.87■□□□□ 0.77
VARS2-209ENST00000477288 PAPOLAP51003 745 aaKnown RBP19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms