RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 TMEM161AQ9NX61 479 aa17.67■□□□□ 0.42
SMG5-204ENST00000476954 ZFYVE26Q68DK2 2539 aa17.66■□□□□ 0.42
SMG5-204ENST00000476954 NT5C1B-RDH14C9J2C7 533 aa17.66■□□□□ 0.42
SMG5-204ENST00000476954 RPLP2P05387 115 aaKnown RBP17.66■□□□□ 0.42
SMG5-204ENST00000476954 MX1P20591 662 aa17.66■□□□□ 0.42
SMG5-204ENST00000476954 PPM1AP35813 382 aa17.66■□□□□ 0.42
SMG5-204ENST00000476954 FAM189BP81408 668 aa17.66■□□□□ 0.42
SMG5-204ENST00000476954 NMIQ13287 307 aaPredicted RBP17.66■□□□□ 0.42
SMG5-204ENST00000476954 C20orf194Q5TEA3 1177 aa17.66■□□□□ 0.42
SMG5-204ENST00000476954 PCNX4Q63HM2 1172 aa17.66■□□□□ 0.42
SMG5-204ENST00000476954 CCDC149Q6ZUS6 474 aa17.66■□□□□ 0.42
SMG5-204ENST00000476954 OTOP3Q7RTS5 596 aa17.66■□□□□ 0.42
SMG5-204ENST00000476954 MAML2Q8IZL2 1156 aaPredicted RBP17.66■□□□□ 0.42
SMG5-204ENST00000476954 CHAMP1Q96JM3 812 aa17.66■□□□□ 0.42
SMG5-204ENST00000476954 ZSWIM5Q9P217 1185 aa17.66■□□□□ 0.42
SMG5-204ENST00000476954 NCDNQ9UBB6 729 aa17.66■□□□□ 0.42
SMG5-204ENST00000476954 WNT16Q9UBV4 365 aa17.66■□□□□ 0.42
SMG5-204ENST00000476954 COL4A3Q01955 1670 aa17.65■□□□□ 0.42
SMG5-204ENST00000476954 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.65■□□□□ 0.42
SMG5-204ENST00000476954 SMIM35A0A1B0GVV1 85 aa17.65■□□□□ 0.42
SMG5-204ENST00000476954 N4BP1O75113 896 aaKnown RBP17.65■□□□□ 0.42
SMG5-204ENST00000476954 LRRN2O75325 713 aa17.65■□□□□ 0.42
SMG5-204ENST00000476954 ADRB1P08588 477 aa17.65■□□□□ 0.42
SMG5-204ENST00000476954 GLULP15104 373 aa17.65■□□□□ 0.42
SMG5-204ENST00000476954 CCDC178Q5BJE1 867 aa17.65■□□□□ 0.42
SMG5-204ENST00000476954 VARS2Q5ST30 1063 aaKnown RBP17.65■□□□□ 0.42
SMG5-204ENST00000476954 USP17L6PQ6QN14 398 aa17.65■□□□□ 0.42
SMG5-204ENST00000476954 GPR149Q86SP6 731 aa17.65■□□□□ 0.42
SMG5-204ENST00000476954 NLRX1Q86UT6 975 aa17.65■□□□□ 0.42
SMG5-204ENST00000476954 C1orf210Q8IVY1 113 aa17.65■□□□□ 0.42
SMG5-204ENST00000476954 DOCK8Q8NF50 2099 aa17.64■□□□□ 0.41
SMG5-204ENST00000476954 PALM3A6NDB9 673 aaPredicted RBP17.64■□□□□ 0.41
SMG5-204ENST00000476954 CYTH3O43739 400 aa17.64■□□□□ 0.41
SMG5-204ENST00000476954 HOXB3P14651 431 aaPredicted RBP17.64■□□□□ 0.41
SMG5-204ENST00000476954 METAP2P50579 478 aaKnown RBP eCLIP17.64■□□□□ 0.41
SMG5-204ENST00000476954 DSC3Q14574 896 aa17.64■□□□□ 0.41
SMG5-204ENST00000476954 MTHFD1LQ6UB35 978 aa17.64■□□□□ 0.41
SMG5-204ENST00000476954 FAM228AQ86W67 206 aa17.64■□□□□ 0.41
SMG5-204ENST00000476954 LRRC43Q8N309 656 aa17.64■□□□□ 0.41
SMG5-204ENST00000476954 GIMAP8Q8ND71 665 aaPredicted RBP17.64■□□□□ 0.41
SMG5-204ENST00000476954 PIBF1Q8WXW3 757 aa17.64■□□□□ 0.41
SMG5-204ENST00000476954 CHMP4BQ9H444 224 aaKnown RBP17.64■□□□□ 0.41
SMG5-204ENST00000476954 CDV3Q9UKY7 258 aaKnown RBP17.64■□□□□ 0.41
SMG5-204ENST00000476954 MIA3Q5JRA6 1907 aa17.63■□□□□ 0.41
SMG5-204ENST00000476954 CCER2I3L3R5 266 aa17.63■□□□□ 0.41
SMG5-204ENST00000476954 KINO60870 393 aaKnown RBP17.63■□□□□ 0.41
SMG5-204ENST00000476954 ITGB5P18084 799 aa17.63■□□□□ 0.41
SMG5-204ENST00000476954 CABP7Q86V35 215 aa17.63■□□□□ 0.41
SMG5-204ENST00000476954 TMEM173Q86WV6 379 aaPredicted RBP17.63■□□□□ 0.41
SMG5-204ENST00000476954 EVI5LQ96CN4 794 aa17.63■□□□□ 0.41
SMG5-204ENST00000476954 RIOX1Q9H6W3 641 aa17.63■□□□□ 0.41
SMG5-204ENST00000476954 ELAC1Q9H777 363 aaKnown RBP17.63■□□□□ 0.41
SMG5-204ENST00000476954 IGSF9Q9P2J2 1179 aa17.63■□□□□ 0.41
SMG5-204ENST00000476954 SALL3Q9BXA9 1300 aa17.63■□□□□ 0.41
SMG5-204ENST00000476954 CEP295Q9C0D2 2601 aa17.62■□□□□ 0.41
SMG5-204ENST00000476954 ZNF213O14771 459 aa17.62■□□□□ 0.41
SMG5-204ENST00000476954 HNRNPUQ00839 825 aaKnown RBP eCLIP17.62■□□□□ 0.41
SMG5-204ENST00000476954 CLLU1OSQ5K130 101 aa17.62■□□□□ 0.41
SMG5-204ENST00000476954 KIAA0319LQ8IZA0 1049 aa17.62■□□□□ 0.41
SMG5-204ENST00000476954 VPS52Q8N1B4 723 aa17.62■□□□□ 0.41
SMG5-204ENST00000476954 NME8Q8N427 588 aa17.62■□□□□ 0.41
SMG5-204ENST00000476954 RNF169Q8NCN4 708 aa17.62■□□□□ 0.41
SMG5-204ENST00000476954 GPR152Q8TDT2 470 aa17.62■□□□□ 0.41
SMG5-204ENST00000476954 GPRASP2Q96D09 838 aa17.62■□□□□ 0.41
SMG5-204ENST00000476954 FOXQ1Q9C009 403 aa17.62■□□□□ 0.41
SMG5-204ENST00000476954 ZBP1Q9H171 429 aa17.62■□□□□ 0.41
SMG5-204ENST00000476954 SIT1Q9Y3P8 196 aa17.62■□□□□ 0.41
SMG5-204ENST00000476954 PATJQ8NI35 1801 aa17.62■□□□□ 0.41
SMG5-204ENST00000476954 SDHBP21912 280 aa17.61■□□□□ 0.41
SMG5-204ENST00000476954 KLRC1P26715 233 aa17.61■□□□□ 0.41
SMG5-204ENST00000476954 COL9A3Q14050 684 aaPredicted RBP17.61■□□□□ 0.41
SMG5-204ENST00000476954 SLC44A3Q8N4M1 653 aa17.61■□□□□ 0.41
SMG5-204ENST00000476954 ST13P5Q8NFI4 369 aaPredicted RBP17.61■□□□□ 0.41
SMG5-204ENST00000476954 SMARCC2Q8TAQ2 1214 aa17.61■□□□□ 0.41
SMG5-204ENST00000476954 OSMRQ99650 979 aa17.61■□□□□ 0.41
SMG5-204ENST00000476954 CNOT1A5YKK6 2376 aaKnown RBP17.6■□□□□ 0.41
SMG5-204ENST00000476954 PNMA6FA0A0J9YX94 578 aa17.6■□□□□ 0.41
SMG5-204ENST00000476954 GPR182O15218 404 aa17.6■□□□□ 0.41
SMG5-204ENST00000476954 TGM1P22735 817 aa17.6■□□□□ 0.41
SMG5-204ENST00000476954 BCAR1P56945 870 aa17.6■□□□□ 0.41
SMG5-204ENST00000476954 SEC23AQ15436 765 aa17.6■□□□□ 0.41
SMG5-204ENST00000476954 KIZQ2M2Z5 673 aa17.6■□□□□ 0.41
SMG5-204ENST00000476954 LETM2Q2VYF4 491 aa17.6■□□□□ 0.41
SMG5-204ENST00000476954 IFIT1BQ5T764 474 aaKnown RBP17.6■□□□□ 0.41
SMG5-204ENST00000476954 ABI1Q8IZP0 508 aa17.6■□□□□ 0.41
SMG5-204ENST00000476954 TMEM87AQ8NBN3 555 aa17.6■□□□□ 0.41
SMG5-204ENST00000476954 HELQQ8TDG4 1101 aa17.6■□□□□ 0.41
SMG5-204ENST00000476954 BCL7CQ8WUZ0 217 aaPredicted RBP17.6■□□□□ 0.41
SMG5-204ENST00000476954 RTKNQ9BST9 563 aa17.6■□□□□ 0.41
SMG5-204ENST00000476954 SFXN1Q9H9B4 322 aa17.6■□□□□ 0.41
SMG5-204ENST00000476954 PARD6AQ9NPB6 346 aa17.6■□□□□ 0.41
SMG5-204ENST00000476954 PRR5-ARHGAP8B1AHC4 643 aa17.59■□□□□ 0.41
SMG5-204ENST00000476954 MEIS2O14770 477 aa17.59■□□□□ 0.41
SMG5-204ENST00000476954 SRFP11831 508 aa17.59■□□□□ 0.41
SMG5-204ENST00000476954 GBP2P32456 591 aaPredicted RBP17.59■□□□□ 0.41
SMG5-204ENST00000476954 ARHGAP8P85298 464 aa17.59■□□□□ 0.41
SMG5-204ENST00000476954 LMNB2Q03252 620 aa17.59■□□□□ 0.41
SMG5-204ENST00000476954 GRM4Q14833 912 aa17.59■□□□□ 0.41
SMG5-204ENST00000476954 PHLDB3Q6NSJ2 640 aa17.59■□□□□ 0.41
SMG5-204ENST00000476954 UBAC1Q9BSL1 405 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms