RNA–Protein interactions for RNA: ENST00000476581.6

XPC-205, Transcript of XPC complex subunit, DNA damage recognition and repair factor, humanhuman

TSL 1 (best)

Gene XPC, Length 2,944 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPC-205ENST00000476581 STXBP2Q15833 593 aa13.27□□□□□ -0.29
XPC-205ENST00000476581 RIT2Q99578 217 aa13.27□□□□□ -0.29
XPC-205ENST00000476581 ARHGAP39Q9C0H5 1083 aa13.27□□□□□ -0.29
XPC-205ENST00000476581 PLEKHA4Q9H4M7 779 aa13.27□□□□□ -0.29
XPC-205ENST00000476581 TBC1D7Q9P0N9 293 aa13.27□□□□□ -0.29
XPC-205ENST00000476581 STX10O60499 249 aa13.26□□□□□ -0.29
XPC-205ENST00000476581 TUBBP07437 444 aa13.26□□□□□ -0.29
XPC-205ENST00000476581 ATP1A3P13637 1013 aa13.26□□□□□ -0.29
XPC-205ENST00000476581 UBA1P22314 1058 aaKnown RBP13.26□□□□□ -0.29
XPC-205ENST00000476581 YY1P25490 414 aa13.26□□□□□ -0.29
XPC-205ENST00000476581 PMS1P54277 932 aaKnown RBP13.26□□□□□ -0.29
XPC-205ENST00000476581 SV2BQ7L1I2 683 aa13.26□□□□□ -0.29
XPC-205ENST00000476581 DHX37Q8IY37 1157 aaKnown RBP13.26□□□□□ -0.29
XPC-205ENST00000476581 NPLOC4Q8TAT6 608 aa13.26□□□□□ -0.29
XPC-205ENST00000476581 BAG1Q99933 345 aaPredicted RBP13.26□□□□□ -0.29
XPC-205ENST00000476581 CCDC189A1A4V9 331 aa13.26□□□□□ -0.29
XPC-205ENST00000476581 MANSC4A6NHS7 340 aaPredicted RBP13.26□□□□□ -0.29
XPC-205ENST00000476581 SFI1A8K8P3 1242 aa13.26□□□□□ -0.29
XPC-205ENST00000476581 CYP11B2P19099 503 aa13.26□□□□□ -0.29
XPC-205ENST00000476581 FAM110CQ1W6H9 321 aa13.26□□□□□ -0.29
XPC-205ENST00000476581 ZNF792Q3KQV3 632 aa13.26□□□□□ -0.29
XPC-205ENST00000476581 MIER3Q7Z3K6 550 aa13.26□□□□□ -0.29
XPC-205ENST00000476581 KIAA0895Q8NCT3 520 aa13.26□□□□□ -0.29
XPC-205ENST00000476581 C7orf25Q9BPX7 421 aa13.26□□□□□ -0.29
XPC-205ENST00000476581 SUGCTQ9HAC7 445 aa13.26□□□□□ -0.29
XPC-205ENST00000476581 TRIM49BA6NDI0 452 aa13.26□□□□□ -0.29
XPC-205ENST00000476581 PRCPP42785 496 aa13.26□□□□□ -0.29
XPC-205ENST00000476581 PDE4DQ08499 809 aa13.26□□□□□ -0.29
XPC-205ENST00000476581 TUBB2AQ13885 445 aa13.26□□□□□ -0.29
XPC-205ENST00000476581 KCNV1Q6PIU1 500 aa13.26□□□□□ -0.29
XPC-205ENST00000476581 GPBP1Q86WP2 473 aa13.26□□□□□ -0.29
XPC-205ENST00000476581 AFAP1L1Q8TED9 768 aa13.26□□□□□ -0.29
XPC-205ENST00000476581 GPRASP2Q96D09 838 aa13.26□□□□□ -0.29
XPC-205ENST00000476581 IWS1Q96ST2 819 aa13.26□□□□□ -0.29
XPC-205ENST00000476581 POLR3CQ9BUI4 534 aaPredicted RBP13.26□□□□□ -0.29
XPC-205ENST00000476581 TUBB2BQ9BVA1 445 aa13.26□□□□□ -0.29
XPC-205ENST00000476581 SLC39A2Q9NP94 309 aa13.26□□□□□ -0.29
XPC-205ENST00000476581 FLRT1Q9NZU1 646 aa13.26□□□□□ -0.29
XPC-205ENST00000476581 NKRFO15226 690 aaKnown RBP eCLIP13.25□□□□□ -0.29
XPC-205ENST00000476581 ZNF862O60290 1169 aa13.25□□□□□ -0.29
XPC-205ENST00000476581 SERPINC1P01008 464 aa13.25□□□□□ -0.29
XPC-205ENST00000476581 GCLCP48506 637 aaPredicted RBP13.25□□□□□ -0.29
XPC-205ENST00000476581 LRRC41Q15345 812 aa13.25□□□□□ -0.29
XPC-205ENST00000476581 HAUS3Q68CZ6 603 aa13.25□□□□□ -0.29
XPC-205ENST00000476581 PLA2G4FQ68DD2 849 aa13.25□□□□□ -0.29
XPC-205ENST00000476581 C17orf99Q6UX52 265 aa13.25□□□□□ -0.29
XPC-205ENST00000476581 GSDMAQ96QA5 445 aa13.25□□□□□ -0.29
XPC-205ENST00000476581 ZSWIM4Q9H7M6 989 aa13.25□□□□□ -0.29
XPC-205ENST00000476581 STK17AQ9UEE5 414 aa13.25□□□□□ -0.29
XPC-205ENST00000476581 CDC23Q9UJX2 597 aa13.25□□□□□ -0.29
XPC-205ENST00000476581 ADCY6O43306 1168 aa13.25□□□□□ -0.29
XPC-205ENST00000476581 PHACTR2O75167 634 aa13.25□□□□□ -0.29
XPC-205ENST00000476581 IDEP14735 1019 aa13.25□□□□□ -0.29
XPC-205ENST00000476581 AARSP49588 968 aaKnown RBP eCLIP13.25□□□□□ -0.29
XPC-205ENST00000476581 GOLGA8FQ08AF8 430 aa13.25□□□□□ -0.29
XPC-205ENST00000476581 GOLGA8DPQ0D2H9 430 aa13.25□□□□□ -0.29
XPC-205ENST00000476581 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.25□□□□□ -0.29
XPC-205ENST00000476581 ARMCX2Q7L311 632 aa13.25□□□□□ -0.29
XPC-205ENST00000476581 MAEAQ7L5Y9 396 aa13.25□□□□□ -0.29
XPC-205ENST00000476581 CCDC60Q8IWA6 550 aaPredicted RBP13.25□□□□□ -0.29
XPC-205ENST00000476581 SHCBP1Q8NEM2 672 aa13.25□□□□□ -0.29
XPC-205ENST00000476581 IKZF4Q9H2S9 585 aa13.25□□□□□ -0.29
XPC-205ENST00000476581 HOOK1Q9UJC3 728 aaKnown RBP13.25□□□□□ -0.29
XPC-205ENST00000476581 TLR2O60603 784 aa13.24□□□□□ -0.29
XPC-205ENST00000476581 TBX2Q13207 712 aaPredicted RBP13.24□□□□□ -0.29
XPC-205ENST00000476581 EPHA7Q15375 998 aa13.24□□□□□ -0.29
XPC-205ENST00000476581 CCL14Q16627 93 aa13.24□□□□□ -0.29
XPC-205ENST00000476581 PRAMEF19Q5SWL8 479 aa13.24□□□□□ -0.29
XPC-205ENST00000476581 TOGARAM2Q6ZUX3 1019 aa13.24□□□□□ -0.29
XPC-205ENST00000476581 NLRX1Q86UT6 975 aa13.24□□□□□ -0.29
XPC-205ENST00000476581 VIPAS39Q9H9C1 493 aa13.24□□□□□ -0.29
XPC-205ENST00000476581 JPH1Q9HDC5 661 aaPredicted RBP13.24□□□□□ -0.29
XPC-205ENST00000476581 KDM3AQ9Y4C1 1321 aa13.24□□□□□ -0.29
XPC-205ENST00000476581 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.24□□□□□ -0.29
XPC-205ENST00000476581 PRPF6O94906 941 aaKnown RBP13.24□□□□□ -0.29
XPC-205ENST00000476581 LIG3P49916 1009 aa13.24□□□□□ -0.29
XPC-205ENST00000476581 CASP5P51878 434 aa13.24□□□□□ -0.29
XPC-205ENST00000476581 NPEPPSP55786 919 aa13.24□□□□□ -0.29
XPC-205ENST00000476581 SOX10P56693 466 aa13.24□□□□□ -0.29
XPC-205ENST00000476581 GRB14Q14449 540 aa13.24□□□□□ -0.29
XPC-205ENST00000476581 ERMNQ8TAM6 284 aa13.24□□□□□ -0.29
XPC-205ENST00000476581 REEP2Q9BRK0 252 aa13.24□□□□□ -0.29
XPC-205ENST00000476581 NT5C3AQ9H0P0 336 aa13.24□□□□□ -0.29
XPC-205ENST00000476581 TBC1D22BQ9NU19 505 aa13.24□□□□□ -0.29
XPC-205ENST00000476581 FANCLQ9NW38 375 aa13.24□□□□□ -0.29
XPC-205ENST00000476581 CTNND2Q9UQB3 1225 aa13.24□□□□□ -0.29
XPC-205ENST00000476581 RNF40O75150 1001 aa13.23□□□□□ -0.29
XPC-205ENST00000476581 SNAI1O95863 264 aaPredicted RBP13.23□□□□□ -0.29
XPC-205ENST00000476581 ATP4AP20648 1035 aa13.23□□□□□ -0.29
XPC-205ENST00000476581 ACTR2P61160 394 aa13.23□□□□□ -0.29
XPC-205ENST00000476581 VSNL1P62760 191 aa13.23□□□□□ -0.29
XPC-205ENST00000476581 GIT2Q14161 759 aa13.23□□□□□ -0.29
XPC-205ENST00000476581 HSDL1Q3SXM5 330 aa13.23□□□□□ -0.29
XPC-205ENST00000476581 XRRA1Q6P2D8 792 aa13.23□□□□□ -0.29
XPC-205ENST00000476581 PYM1Q9BRP8 204 aaKnown RBP13.23□□□□□ -0.29
XPC-205ENST00000476581 CUEDC2Q9H467 287 aa13.23□□□□□ -0.29
XPC-205ENST00000476581 SAMSN1Q9NSI8 373 aaKnown RBP13.23□□□□□ -0.29
XPC-205ENST00000476581 ADD3Q9UEY8 706 aaKnown RBP13.23□□□□□ -0.29
XPC-205ENST00000476581 PUF60Q9UHX1 559 aaKnown RBP13.23□□□□□ -0.29
XPC-205ENST00000476581 DNM3Q9UQ16 869 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms