RNA–Protein interactions for RNA: ENST00000476553.1

NUP58-209, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-209ENST00000476553 VPS72Q15906 364 aa7.35□□□□□ -1.23
NUP58-209ENST00000476553 HABP4Q5JVS0 413 aaKnown RBP7.35□□□□□ -1.23
NUP58-209ENST00000476553 KRT26Q7Z3Y9 468 aa7.35□□□□□ -1.23
NUP58-209ENST00000476553 GPR27Q9NS67 375 aa7.35□□□□□ -1.23
NUP58-209ENST00000476553 SFMBT1Q9UHJ3 866 aa7.35□□□□□ -1.23
NUP58-209ENST00000476553 MRVI1Q9Y6F6 885 aa7.35□□□□□ -1.23
NUP58-209ENST00000476553 MSCO60682 206 aa7.34□□□□□ -1.23
NUP58-209ENST00000476553 BDNFP23560 247 aa7.34□□□□□ -1.23
NUP58-209ENST00000476553 EPHA5P54756 1037 aa7.34□□□□□ -1.23
NUP58-209ENST00000476553 RRADP55042 308 aa7.34□□□□□ -1.23
NUP58-209ENST00000476553 NOLC1Q14978 699 aaKnown RBP eCLIP7.34□□□□□ -1.23
NUP58-209ENST00000476553 ZRSR2Q15696 482 aaKnown RBP7.34□□□□□ -1.23
NUP58-209ENST00000476553 NFE2Q16621 373 aaPredicted RBP7.34□□□□□ -1.23
NUP58-209ENST00000476553 TBR1Q16650 682 aa7.34□□□□□ -1.23
NUP58-209ENST00000476553 SV2CQ496J9 727 aa7.34□□□□□ -1.23
NUP58-209ENST00000476553 BRDTQ58F21 947 aaPredicted RBP7.34□□□□□ -1.23
NUP58-209ENST00000476553 CPLX3Q8WVH0 158 aa7.34□□□□□ -1.23
NUP58-209ENST00000476553 HNRNPLLQ8WVV9 542 aaKnown RBP7.34□□□□□ -1.23
NUP58-209ENST00000476553 CLIP3Q96DZ5 547 aa7.34□□□□□ -1.23
NUP58-209ENST00000476553 NAP1L5Q96NT1 182 aaPredicted RBP7.34□□□□□ -1.23
NUP58-209ENST00000476553 MPHOSPH6Q99547 160 aaKnown RBP7.34□□□□□ -1.23
NUP58-209ENST00000476553 DNAJC7Q99615 494 aa7.34□□□□□ -1.23
NUP58-209ENST00000476553 CCDC113Q9H0I3 377 aa7.34□□□□□ -1.23
NUP58-209ENST00000476553 LRP2BPQ9P2M1 347 aa7.34□□□□□ -1.23
NUP58-209ENST00000476553 SWAP70Q9UH65 585 aa7.34□□□□□ -1.23
NUP58-209ENST00000476553 FBXO9Q9UK97 447 aaPredicted RBP7.34□□□□□ -1.23
NUP58-209ENST00000476553 CCDC85CA6NKD9 419 aa7.33□□□□□ -1.24
NUP58-209ENST00000476553 IFRD1O00458 451 aaPredicted RBP7.33□□□□□ -1.24
NUP58-209ENST00000476553 ARHGAP6O43182 974 aa7.33□□□□□ -1.24
NUP58-209ENST00000476553 TSPAN6O43657 245 aa7.33□□□□□ -1.24
NUP58-209ENST00000476553 SUSD5O60279 629 aa7.33□□□□□ -1.24
NUP58-209ENST00000476553 KRT18P05783 430 aaKnown RBP7.33□□□□□ -1.24
NUP58-209ENST00000476553 WDR78Q5VTH9 848 aa7.33□□□□□ -1.24
NUP58-209ENST00000476553 C6orf15Q6UXA7 325 aaPredicted RBP7.33□□□□□ -1.24
NUP58-209ENST00000476553 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.33□□□□□ -1.24
NUP58-209ENST00000476553 AMOTL1Q8IY63 956 aa7.33□□□□□ -1.24
NUP58-209ENST00000476553 ULK2Q8IYT8 1036 aa7.33□□□□□ -1.24
NUP58-209ENST00000476553 NAP1L4Q99733 375 aaKnown RBP7.33□□□□□ -1.24
NUP58-209ENST00000476553 R3HCC1Q9Y3T6 440 aaKnown RBP7.33□□□□□ -1.24
NUP58-209ENST00000476553 ACOT7O00154 380 aa7.32□□□□□ -1.24
NUP58-209ENST00000476553 EXOC5O00471 708 aa7.32□□□□□ -1.24
NUP58-209ENST00000476553 RAMP2O60895 175 aa7.32□□□□□ -1.24
NUP58-209ENST00000476553 HIBADHP31937 336 aaKnown RBP7.32□□□□□ -1.24
NUP58-209ENST00000476553 MSX2P35548 267 aaPredicted RBP7.32□□□□□ -1.24
NUP58-209ENST00000476553 CDKN1CP49918 316 aaPredicted RBP7.32□□□□□ -1.24
NUP58-209ENST00000476553 EPHB1P54762 984 aa7.32□□□□□ -1.24
NUP58-209ENST00000476553 MAP4K2Q12851 820 aa7.32□□□□□ -1.24
NUP58-209ENST00000476553 ARNT2Q9HBZ2 717 aa7.32□□□□□ -1.24
NUP58-209ENST00000476553 ATP8A1Q9Y2Q0 1164 aa7.32□□□□□ -1.24
NUP58-209ENST00000476553 MSRB2Q9Y3D2 182 aa7.32□□□□□ -1.24
NUP58-209ENST00000476553 NUB1Q9Y5A7 615 aa7.32□□□□□ -1.24
NUP58-209ENST00000476553 LMO1P25800 156 aa7.31□□□□□ -1.24
NUP58-209ENST00000476553 IL12RB1P42701 662 aa7.31□□□□□ -1.24
NUP58-209ENST00000476553 IFRD2Q12894 506 aaPredicted RBP7.31□□□□□ -1.24
NUP58-209ENST00000476553 HLTFQ14527 1009 aaKnown RBP eCLIP7.31□□□□□ -1.24
NUP58-209ENST00000476553 BRD3Q15059 726 aa7.31□□□□□ -1.24
NUP58-209ENST00000476553 PPP2R5AQ15172 486 aa7.31□□□□□ -1.24
NUP58-209ENST00000476553 SYCP2LQ5T4T6 812 aa7.31□□□□□ -1.24
NUP58-209ENST00000476553 NAF1Q96HR8 494 aaKnown RBP7.31□□□□□ -1.24
NUP58-209ENST00000476553 PLA2G3Q9NZ20 509 aa7.31□□□□□ -1.24
NUP58-209ENST00000476553 PRKAG3Q9UGI9 489 aa7.31□□□□□ -1.24
NUP58-209ENST00000476553 KRTAP23-1A1A580 65 aa7.3□□□□□ -1.24
NUP58-209ENST00000476553 B2RBV5 119 aa7.3□□□□□ -1.24
NUP58-209ENST00000476553 ALDH1L1O75891 902 aa7.3□□□□□ -1.24
NUP58-209ENST00000476553 FGAP02671 866 aa7.3□□□□□ -1.24
NUP58-209ENST00000476553 MYL1P05976 194 aa7.3□□□□□ -1.24
NUP58-209ENST00000476553 POU5F1BQ06416 359 aa7.3□□□□□ -1.24
NUP58-209ENST00000476553 SQSTM1Q13501 440 aa7.3□□□□□ -1.24
NUP58-209ENST00000476553 PCGF5Q86SE9 256 aa7.3□□□□□ -1.24
NUP58-209ENST00000476553 TMPRSS6Q8IU80 811 aa7.3□□□□□ -1.24
NUP58-209ENST00000476553 ZDHHC5Q9C0B5 715 aa7.3□□□□□ -1.24
NUP58-209ENST00000476553 C12orf65Q9H3J6 166 aaKnown RBP7.3□□□□□ -1.24
NUP58-209ENST00000476553 PUF60Q9UHX1 559 aaKnown RBP7.3□□□□□ -1.24
NUP58-209ENST00000476553 NKRFO15226 690 aaKnown RBP eCLIP7.29□□□□□ -1.24
NUP58-209ENST00000476553 FOXN1O15353 648 aa7.29□□□□□ -1.24
NUP58-209ENST00000476553 KCNQ2O43526 872 aa7.29□□□□□ -1.24
NUP58-209ENST00000476553 PEX11BO96011 259 aa7.29□□□□□ -1.24
NUP58-209ENST00000476553 CD53P19397 219 aa7.29□□□□□ -1.24
NUP58-209ENST00000476553 GRK2P25098 689 aa7.29□□□□□ -1.24
NUP58-209ENST00000476553 GRK3P35626 688 aa7.29□□□□□ -1.24
NUP58-209ENST00000476553 TKFCQ3LXA3 575 aa7.29□□□□□ -1.24
NUP58-209ENST00000476553 PPP4R4Q6NUP7 873 aa7.29□□□□□ -1.24
NUP58-209ENST00000476553 RSPO2Q6UXX9 243 aaPredicted RBP7.29□□□□□ -1.24
NUP58-209ENST00000476553 KCTD1Q719H9 257 aa7.29□□□□□ -1.24
NUP58-209ENST00000476553 FAM178BQ8IXR5 827 aa7.29□□□□□ -1.24
NUP58-209ENST00000476553 KIAA1683Q9H0B3 1180 aa7.29□□□□□ -1.24
NUP58-209ENST00000476553 ZNF700Q9H0M5 742 aa7.29□□□□□ -1.24
NUP58-209ENST00000476553 SLC39A2Q9NP94 309 aa7.29□□□□□ -1.24
NUP58-209ENST00000476553 GIT1Q9Y2X7 761 aa7.29□□□□□ -1.24
NUP58-209ENST00000476553 ALG1L2C9J202 215 aa7.28□□□□□ -1.24
NUP58-209ENST00000476553 FOSP01100 380 aaPredicted RBP7.28□□□□□ -1.24
NUP58-209ENST00000476553 HSP90AA1P07900 732 aaKnown RBP7.28□□□□□ -1.24
NUP58-209ENST00000476553 COL6A2P12110 1019 aa7.28□□□□□ -1.24
NUP58-209ENST00000476553 CNGA1P29973 690 aa7.28□□□□□ -1.24
NUP58-209ENST00000476553 ADRA1BP35368 520 aa7.28□□□□□ -1.24
NUP58-209ENST00000476553 ATXN1P54253 815 aaKnown RBP7.28□□□□□ -1.24
NUP58-209ENST00000476553 SPIRE1Q08AE8 756 aa7.28□□□□□ -1.24
NUP58-209ENST00000476553 DBPQ10586 325 aaPredicted RBP7.28□□□□□ -1.24
NUP58-209ENST00000476553 TTF1Q15361 905 aaPredicted RBP7.28□□□□□ -1.24
NUP58-209ENST00000476553 MRM1Q6IN84 353 aaKnown RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms