RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 SLC38A10Q9HBR0 1119 aa18.22■□□□□ 0.51
TVP23B-202ENST00000476139 GJA3Q9Y6H8 435 aa18.22■□□□□ 0.51
TVP23B-202ENST00000476139 FRMPD4Q14CM0 1322 aa18.22■□□□□ 0.51
TVP23B-202ENST00000476139 HIP1RO75146 1068 aa18.22■□□□□ 0.51
TVP23B-202ENST00000476139 VCAM1P19320 739 aa18.22■□□□□ 0.51
TVP23B-202ENST00000476139 ASIC2Q16515 512 aa18.22■□□□□ 0.51
TVP23B-202ENST00000476139 TKFCQ3LXA3 575 aa18.22■□□□□ 0.51
TVP23B-202ENST00000476139 MIER3Q7Z3K6 550 aa18.22■□□□□ 0.51
TVP23B-202ENST00000476139 ZNF571Q7Z3V5 609 aaPredicted RBP18.22■□□□□ 0.51
TVP23B-202ENST00000476139 TEX2Q8IWB9 1127 aa18.22■□□□□ 0.51
TVP23B-202ENST00000476139 KCTD17Q8N5Z5 321 aa18.22■□□□□ 0.51
TVP23B-202ENST00000476139 SYTL5Q8TDW5 730 aaPredicted RBP18.22■□□□□ 0.51
TVP23B-202ENST00000476139 RIT2Q99578 217 aa18.22■□□□□ 0.51
TVP23B-202ENST00000476139 KIF13BQ9NQT8 1826 aa18.22■□□□□ 0.51
TVP23B-202ENST00000476139 ARHGEF35A5YM69 484 aa18.21■□□□□ 0.51
TVP23B-202ENST00000476139 EIF3DO15371 548 aaKnown RBP eCLIP18.21■□□□□ 0.51
TVP23B-202ENST00000476139 CYP2J2P51589 502 aa18.21■□□□□ 0.51
TVP23B-202ENST00000476139 ZNF131P52739 623 aa18.21■□□□□ 0.51
TVP23B-202ENST00000476139 TGFB2P61812 414 aa18.21■□□□□ 0.51
TVP23B-202ENST00000476139 SPP2Q13103 211 aa18.21■□□□□ 0.51
TVP23B-202ENST00000476139 KIAA0753Q2KHM9 967 aa18.21■□□□□ 0.51
TVP23B-202ENST00000476139 OSBPL9Q96SU4 736 aa18.21■□□□□ 0.51
TVP23B-202ENST00000476139 TLR10Q9BXR5 811 aa18.21■□□□□ 0.51
TVP23B-202ENST00000476139 SIX2Q9NPC8 291 aa18.21■□□□□ 0.51
TVP23B-202ENST00000476139 GCNT4Q9P109 453 aa18.21■□□□□ 0.51
TVP23B-202ENST00000476139 HACL1Q9UJ83 578 aa18.21■□□□□ 0.51
TVP23B-202ENST00000476139 ZHX2Q9Y6X8 837 aa18.21■□□□□ 0.51
TVP23B-202ENST00000476139 MYBL2P10244 700 aa18.21■□□□□ 0.51
TVP23B-202ENST00000476139 MAPK7Q13164 816 aa18.21■□□□□ 0.51
TVP23B-202ENST00000476139 TNIP1Q15025 636 aa18.21■□□□□ 0.51
TVP23B-202ENST00000476139 FAM186BQ8IYM0 893 aa18.21■□□□□ 0.51
TVP23B-202ENST00000476139 RIN2Q8WYP3 895 aaPredicted RBP18.21■□□□□ 0.51
TVP23B-202ENST00000476139 LPAR1Q92633 364 aa18.21■□□□□ 0.51
TVP23B-202ENST00000476139 ZKSCAN4Q969J2 545 aaPredicted RBP18.21■□□□□ 0.51
TVP23B-202ENST00000476139 ALS2CR12Q96Q35 445 aa18.21■□□□□ 0.51
TVP23B-202ENST00000476139 PLEKHA4Q9H4M7 779 aa18.21■□□□□ 0.51
TVP23B-202ENST00000476139 METTL14Q9HCE5 456 aaKnown RBP18.21■□□□□ 0.51
TVP23B-202ENST00000476139 PLCB1Q9NQ66 1216 aa18.21■□□□□ 0.51
TVP23B-202ENST00000476139 RPTORQ8N122 1335 aa18.21■□□□□ 0.51
TVP23B-202ENST00000476139 ATP9AO75110 1047 aa18.21■□□□□ 0.5
TVP23B-202ENST00000476139 MYCLP12524 364 aaPredicted RBP18.21■□□□□ 0.5
TVP23B-202ENST00000476139 ZNF280AP59817 542 aaPredicted RBP18.21■□□□□ 0.5
TVP23B-202ENST00000476139 PADI6Q6TGC4 694 aa18.21■□□□□ 0.5
TVP23B-202ENST00000476139 NOX5Q96PH1 765 aa18.21■□□□□ 0.5
TVP23B-202ENST00000476139 RIPK3Q9Y572 518 aa18.21■□□□□ 0.5
TVP23B-202ENST00000476139 TISP43B9A030 160 aa18.2■□□□□ 0.5
TVP23B-202ENST00000476139 SLC16A3O15427 465 aaKnown RBP18.2■□□□□ 0.5
TVP23B-202ENST00000476139 PSMC2P35998 433 aaKnown RBP18.2■□□□□ 0.5
TVP23B-202ENST00000476139 GMPSP49915 693 aaPredicted RBP18.2■□□□□ 0.5
TVP23B-202ENST00000476139 FAM193AP78312 1265 aa18.2■□□□□ 0.5
TVP23B-202ENST00000476139 MTMR1Q13613 665 aa18.2■□□□□ 0.5
TVP23B-202ENST00000476139 RPAP3Q9H6T3 665 aaPredicted RBP18.2■□□□□ 0.5
TVP23B-202ENST00000476139 AGO4Q9HCK5 861 aaKnown RBP18.2■□□□□ 0.5
TVP23B-202ENST00000476139 BCS1LQ9Y276 419 aa18.2■□□□□ 0.5
TVP23B-202ENST00000476139 FAM170AA1A519 330 aa18.2■□□□□ 0.5
TVP23B-202ENST00000476139 CTNND1O60716 968 aaKnown RBP18.2■□□□□ 0.5
TVP23B-202ENST00000476139 PALMO75781 387 aa18.2■□□□□ 0.5
TVP23B-202ENST00000476139 TNFAIP1Q13829 316 aa18.2■□□□□ 0.5
TVP23B-202ENST00000476139 WDR93Q6P2C0 686 aa18.2■□□□□ 0.5
TVP23B-202ENST00000476139 GBP6Q6ZN66 633 aa18.2■□□□□ 0.5
TVP23B-202ENST00000476139 HDAC7Q8WUI4 952 aa18.2■□□□□ 0.5
TVP23B-202ENST00000476139 AGPAT3Q9NRZ7 376 aa18.2■□□□□ 0.5
TVP23B-202ENST00000476139 CNOT7Q9UIV1 285 aaKnown RBP18.2■□□□□ 0.5
TVP23B-202ENST00000476139 PACSIN2Q9UNF0 486 aaPredicted RBP18.2■□□□□ 0.5
TVP23B-202ENST00000476139 CKAP4Q07065 602 aaKnown RBP18.19■□□□□ 0.5
TVP23B-202ENST00000476139 GPS2Q13227 327 aa18.19■□□□□ 0.5
TVP23B-202ENST00000476139 MCF2L2Q86YR7 1114 aa18.19■□□□□ 0.5
TVP23B-202ENST00000476139 MS4A14Q96JA4 679 aa18.19■□□□□ 0.5
TVP23B-202ENST00000476139 GBP3Q9H0R5 595 aa18.19■□□□□ 0.5
TVP23B-202ENST00000476139 UBIAD1Q9Y5Z9 338 aa18.19■□□□□ 0.5
TVP23B-202ENST00000476139 FTCDO95954 541 aa18.19■□□□□ 0.5
TVP23B-202ENST00000476139 TRIM49P0CI25 452 aa18.19■□□□□ 0.5
TVP23B-202ENST00000476139 TRIM49CP0CI26 452 aa18.19■□□□□ 0.5
TVP23B-202ENST00000476139 BCRP11274 1271 aa18.19■□□□□ 0.5
TVP23B-202ENST00000476139 NAB2Q15742 525 aa18.19■□□□□ 0.5
TVP23B-202ENST00000476139 CBWD6Q4V339 395 aa18.19■□□□□ 0.5
TVP23B-202ENST00000476139 CBWD3Q5JTY5 395 aa18.19■□□□□ 0.5
TVP23B-202ENST00000476139 CBWD5Q5RIA9 395 aa18.19■□□□□ 0.5
TVP23B-202ENST00000476139 NSMFQ6X4W1 530 aa18.19■□□□□ 0.5
TVP23B-202ENST00000476139 ODF2LQ9ULJ1 636 aa18.19■□□□□ 0.5
TVP23B-202ENST00000476139 PPP1R9AQ9ULJ8 1098 aa18.19■□□□□ 0.5
TVP23B-202ENST00000476139 EIF3JO75822 258 aaKnown RBP18.18■□□□□ 0.5
TVP23B-202ENST00000476139 P4HBP07237 508 aaKnown RBP18.18■□□□□ 0.5
TVP23B-202ENST00000476139 GUCY2CP25092 1073 aa18.18■□□□□ 0.5
TVP23B-202ENST00000476139 SLC7A5Q01650 507 aa18.18■□□□□ 0.5
TVP23B-202ENST00000476139 PCNX4Q63HM2 1172 aa18.18■□□□□ 0.5
TVP23B-202ENST00000476139 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.18■□□□□ 0.5
TVP23B-202ENST00000476139 RNF10Q8N5U6 811 aaKnown RBP18.18■□□□□ 0.5
TVP23B-202ENST00000476139 MUTP22033 750 aa18.18■□□□□ 0.5
TVP23B-202ENST00000476139 PGM5Q15124 567 aa18.18■□□□□ 0.5
TVP23B-202ENST00000476139 UGCGQ16739 394 aa18.18■□□□□ 0.5
TVP23B-202ENST00000476139 SYCP3Q8IZU3 236 aa18.18■□□□□ 0.5
TVP23B-202ENST00000476139 SPATA4Q8NEY3 305 aa18.18■□□□□ 0.5
TVP23B-202ENST00000476139 ATG4CQ96DT6 458 aa18.18■□□□□ 0.5
TVP23B-202ENST00000476139 RMDN3Q96TC7 470 aa18.18■□□□□ 0.5
TVP23B-202ENST00000476139 PRLRP16471 622 aa18.18■□□□□ 0.5
TVP23B-202ENST00000476139 SKIDA1Q1XH10 827 aa18.18■□□□□ 0.5
TVP23B-202ENST00000476139 HSP90B2PQ58FF3 399 aa18.18■□□□□ 0.5
TVP23B-202ENST00000476139 IQCEQ6IPM2 695 aa18.18■□□□□ 0.5
TVP23B-202ENST00000476139 HS2ST1Q7LGA3 356 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms