RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 EXOC6BQ9Y2D4 811 aa5□□□□□ -1.61
VPS13D-206ENST00000476045 RABGAP1Q9Y3P9 1069 aa5□□□□□ -1.61
VPS13D-206ENST00000476045 AK5Q9Y6K8 562 aa5□□□□□ -1.61
VPS13D-206ENST00000476045 LRRC37A2A6NM11 1700 aa5□□□□□ -1.61
VPS13D-206ENST00000476045 A0A0C4DFX4 3053 aa5□□□□□ -1.61
VPS13D-206ENST00000476045 RPTORQ8N122 1335 aa4.99□□□□□ -1.61
VPS13D-206ENST00000476045 COL6A3P12111 3177 aa4.99□□□□□ -1.61
VPS13D-206ENST00000476045 MCM3APO60318 1980 aa4.99□□□□□ -1.61
VPS13D-206ENST00000476045 SGPL1O95470 568 aa4.99□□□□□ -1.61
VPS13D-206ENST00000476045 GH2P01242 217 aa4.99□□□□□ -1.61
VPS13D-206ENST00000476045 VCAM1P19320 739 aa4.99□□□□□ -1.61
VPS13D-206ENST00000476045 UBE3CQ15386 1083 aa4.99□□□□□ -1.61
VPS13D-206ENST00000476045 ABCB5Q2M3G0 1257 aa4.99□□□□□ -1.61
VPS13D-206ENST00000476045 CERKLQ49MI3 558 aaPredicted RBP4.99□□□□□ -1.61
VPS13D-206ENST00000476045 SLC9C2Q5TAH2 1124 aa4.99□□□□□ -1.61
VPS13D-206ENST00000476045 MAP3K21Q5TCX8 1036 aa4.99□□□□□ -1.61
VPS13D-206ENST00000476045 C22orf34Q6ZV56 151 aa4.99□□□□□ -1.61
VPS13D-206ENST00000476045 CYFIP1Q7L576 1253 aa4.99□□□□□ -1.61
VPS13D-206ENST00000476045 NECAB2Q7Z6G3 386 aa4.99□□□□□ -1.61
VPS13D-206ENST00000476045 UBE3DQ7Z6J8 389 aa4.99□□□□□ -1.61
VPS13D-206ENST00000476045 CHD1LQ86WJ1 897 aa4.99□□□□□ -1.61
VPS13D-206ENST00000476045 HSCBQ8IWL3 235 aa4.99□□□□□ -1.61
VPS13D-206ENST00000476045 SHCBP1Q8NEM2 672 aa4.99□□□□□ -1.61
VPS13D-206ENST00000476045 CCDC17Q96LX7 622 aa4.99□□□□□ -1.61
VPS13D-206ENST00000476045 ANTXR1Q9H6X2 564 aa4.99□□□□□ -1.61
VPS13D-206ENST00000476045 PAG1Q9NWQ8 432 aa4.99□□□□□ -1.61
VPS13D-206ENST00000476045 SLC5A4Q9NY91 659 aa4.99□□□□□ -1.61
VPS13D-206ENST00000476045 CHMP5Q9NZZ3 219 aa4.99□□□□□ -1.61
VPS13D-206ENST00000476045 ARPP21Q9UBL0 812 aaPredicted RBP4.99□□□□□ -1.61
VPS13D-206ENST00000476045 SYNPO2Q9UMS6 1093 aa4.99□□□□□ -1.61
VPS13D-206ENST00000476045 TACC3Q9Y6A5 838 aa4.99□□□□□ -1.61
VPS13D-206ENST00000476045 PLIN4Q96Q06 1357 aa4.99□□□□□ -1.61
VPS13D-206ENST00000476045 ANKRD33BA6NCL7 494 aa4.98□□□□□ -1.61
VPS13D-206ENST00000476045 SLC15A5A6NIM6 579 aa4.98□□□□□ -1.61
VPS13D-206ENST00000476045 WDR46O15213 610 aaKnown RBP4.98□□□□□ -1.61
VPS13D-206ENST00000476045 PAX4O43316 350 aa4.98□□□□□ -1.61
VPS13D-206ENST00000476045 LEFTY1O75610 366 aa4.98□□□□□ -1.61
VPS13D-206ENST00000476045 CEACAM5P06731 702 aa4.98□□□□□ -1.61
VPS13D-206ENST00000476045 ZFYP08048 801 aaPredicted RBP4.98□□□□□ -1.61
VPS13D-206ENST00000476045 HOXC6P09630 235 aa4.98□□□□□ -1.61
VPS13D-206ENST00000476045 ATP5JP18859 108 aa4.98□□□□□ -1.61
VPS13D-206ENST00000476045 EIF4BP23588 611 aaKnown RBP4.98□□□□□ -1.61
VPS13D-206ENST00000476045 MCM4P33991 863 aa4.98□□□□□ -1.61
VPS13D-206ENST00000476045 SHMT1P34896 483 aa4.98□□□□□ -1.61
VPS13D-206ENST00000476045 ST13P50502 369 aaKnown RBP4.98□□□□□ -1.61
VPS13D-206ENST00000476045 PRKCQQ04759 706 aa4.98□□□□□ -1.61
VPS13D-206ENST00000476045 ICA1Q05084 483 aa4.98□□□□□ -1.61
VPS13D-206ENST00000476045 GABPAQ06546 454 aa4.98□□□□□ -1.61
VPS13D-206ENST00000476045 PPM1JQ5JR12 505 aa4.98□□□□□ -1.61
VPS13D-206ENST00000476045 GIMAP6Q6P9H5 292 aa4.98□□□□□ -1.61
VPS13D-206ENST00000476045 GPR142Q7Z601 462 aa4.98□□□□□ -1.61
VPS13D-206ENST00000476045 PLEKHH3Q7Z736 793 aa4.98□□□□□ -1.61
VPS13D-206ENST00000476045 CCDC84Q86UT8 332 aaPredicted RBP4.98□□□□□ -1.61
VPS13D-206ENST00000476045 ABRAQ8N0Z2 381 aa4.98□□□□□ -1.61
VPS13D-206ENST00000476045 MIGA1Q8NAN2 632 aa4.98□□□□□ -1.61
VPS13D-206ENST00000476045 KCT2Q8NC54 265 aa4.98□□□□□ -1.61
VPS13D-206ENST00000476045 NETO1Q8TDF5 533 aa4.98□□□□□ -1.61
VPS13D-206ENST00000476045 TRIB2Q92519 343 aa4.98□□□□□ -1.61
VPS13D-206ENST00000476045 DEFB118Q96PH6 123 aa4.98□□□□□ -1.61
VPS13D-206ENST00000476045 DNAJC2Q99543 621 aaKnown RBP4.98□□□□□ -1.61
VPS13D-206ENST00000476045 HAUS7Q99871 368 aa4.98□□□□□ -1.61
VPS13D-206ENST00000476045 LRRCC1Q9C099 1032 aa4.98□□□□□ -1.61
VPS13D-206ENST00000476045 CCDC8Q9H0W5 538 aaPredicted RBP4.98□□□□□ -1.61
VPS13D-206ENST00000476045 ZNF287Q9HBT7 754 aa4.98□□□□□ -1.61
VPS13D-206ENST00000476045 MCM9Q9NXL9 1143 aa4.98□□□□□ -1.61
VPS13D-206ENST00000476045 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.98□□□□□ -1.61
VPS13D-206ENST00000476045 SAP30BPQ9UHR5 308 aaKnown RBP4.98□□□□□ -1.61
VPS13D-206ENST00000476045 NRBP1Q9UHY1 535 aa4.98□□□□□ -1.61
VPS13D-206ENST00000476045 PALD1Q9ULE6 856 aa4.98□□□□□ -1.61
VPS13D-206ENST00000476045 GABRQQ9UN88 632 aa4.98□□□□□ -1.61
VPS13D-206ENST00000476045 ZNF532Q9HCE3 1301 aa4.97□□□□□ -1.61
VPS13D-206ENST00000476045 MYH6P13533 1939 aa4.97□□□□□ -1.61
VPS13D-206ENST00000476045 TCRBV5S4A2TA0A5A2 114 aa4.97□□□□□ -1.61
VPS13D-206ENST00000476045 H0YGN5 161 aa4.97□□□□□ -1.61
VPS13D-206ENST00000476045 GOLIM4O00461 696 aa4.97□□□□□ -1.61
VPS13D-206ENST00000476045 STRNO43815 780 aa4.97□□□□□ -1.61
VPS13D-206ENST00000476045 MBD4O95243 580 aa4.97□□□□□ -1.61
VPS13D-206ENST00000476045 TFRCP02786 760 aaKnown RBP4.97□□□□□ -1.61
VPS13D-206ENST00000476045 GNAT2P19087 354 aa4.97□□□□□ -1.61
VPS13D-206ENST00000476045 ADD2P35612 726 aa4.97□□□□□ -1.61
VPS13D-206ENST00000476045 FXR1P51114 621 aaKnown RBP eCLIP4.97□□□□□ -1.61
VPS13D-206ENST00000476045 DYNLL1P63167 89 aaKnown RBP4.97□□□□□ -1.61
VPS13D-206ENST00000476045 PTPN11Q06124 597 aaPredicted RBP4.97□□□□□ -1.61
VPS13D-206ENST00000476045 GRB14Q14449 540 aa4.97□□□□□ -1.61
VPS13D-206ENST00000476045 RAB3GAP1Q15042 981 aa4.97□□□□□ -1.61
VPS13D-206ENST00000476045 IFI16Q16666 785 aaKnown RBP4.97□□□□□ -1.61
VPS13D-206ENST00000476045 MFSD14CQ5VZR4 134 aa4.97□□□□□ -1.61
VPS13D-206ENST00000476045 LRFN4Q6PJG9 635 aa4.97□□□□□ -1.61
VPS13D-206ENST00000476045 AGMOQ6ZNB7 445 aa4.97□□□□□ -1.61
VPS13D-206ENST00000476045 CATSPERGQ6ZRH7 1159 aa4.97□□□□□ -1.61
VPS13D-206ENST00000476045 C16orf86Q6ZW13 317 aa4.97□□□□□ -1.61
VPS13D-206ENST00000476045 TICAM2Q86XR7 235 aa4.97□□□□□ -1.61
VPS13D-206ENST00000476045 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.97□□□□□ -1.61
VPS13D-206ENST00000476045 PLD6Q8N2A8 252 aaKnown RBP4.97□□□□□ -1.61
VPS13D-206ENST00000476045 FLCNQ8NFG4 579 aa4.97□□□□□ -1.61
VPS13D-206ENST00000476045 USP6NLQ92738 828 aa4.97□□□□□ -1.61
VPS13D-206ENST00000476045 DPF3Q92784 378 aa4.97□□□□□ -1.61
VPS13D-206ENST00000476045 HEXIM2Q96MH2 286 aaKnown RBP4.97□□□□□ -1.61
VPS13D-206ENST00000476045 DUSP9Q99956 384 aaKnown RBP4.97□□□□□ -1.61
VPS13D-206ENST00000476045 PAGR1Q9BTK6 254 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms