RNA–Protein interactions for RNA: ENST00000475664.1

MCF2L2-209, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-209ENST00000475664 EMC2Q15006 297 aa24.69■■□□□ 1.54
MCF2L2-209ENST00000475664 TRIM71Q2Q1W2 868 aaKnown RBP24.69■■□□□ 1.54
MCF2L2-209ENST00000475664 PADI6Q6TGC4 694 aa24.69■■□□□ 1.54
MCF2L2-209ENST00000475664 SYT2Q8N9I0 419 aaPredicted RBP24.69■■□□□ 1.54
MCF2L2-209ENST00000475664 SLC7A3Q8WY07 619 aa24.69■■□□□ 1.54
MCF2L2-209ENST00000475664 GOLPH3LQ9H4A5 285 aa24.69■■□□□ 1.54
MCF2L2-209ENST00000475664 XPNPEP1Q9NQW7 623 aa24.69■■□□□ 1.54
MCF2L2-209ENST00000475664 PDLIM7Q9NR12 457 aa24.69■■□□□ 1.54
MCF2L2-209ENST00000475664 GOLGA6L4A6NEF3 574 aa24.68■■□□□ 1.54
MCF2L2-209ENST00000475664 USO1O60763 962 aaKnown RBP24.68■■□□□ 1.54
MCF2L2-209ENST00000475664 TPRNQ4KMQ1 711 aa24.68■■□□□ 1.54
MCF2L2-209ENST00000475664 EFCAB12Q6NXP0 572 aa24.68■■□□□ 1.54
MCF2L2-209ENST00000475664 EXOC8Q8IYI6 725 aa24.68■■□□□ 1.54
MCF2L2-209ENST00000475664 LRRC71Q8N4P6 559 aa24.68■■□□□ 1.54
MCF2L2-209ENST00000475664 RETREG2Q8NC44 543 aa24.68■■□□□ 1.54
MCF2L2-209ENST00000475664 LARP4BQ92615 738 aaKnown RBP24.68■■□□□ 1.54
MCF2L2-209ENST00000475664 JPH2Q9BR39 696 aaPredicted RBP24.68■■□□□ 1.54
MCF2L2-209ENST00000475664 BMP2KQ9NSY1 1161 aaPredicted RBP24.68■■□□□ 1.54
MCF2L2-209ENST00000475664 TANC1Q9C0D5 1861 aa24.67■■□□□ 1.54
MCF2L2-209ENST00000475664 POLR2DO15514 142 aaKnown RBP24.67■■□□□ 1.54
MCF2L2-209ENST00000475664 GADD45BO75293 160 aaPredicted RBP24.67■■□□□ 1.54
MCF2L2-209ENST00000475664 CLCN3P51790 818 aa24.67■■□□□ 1.54
MCF2L2-209ENST00000475664 NDUFA8P51970 172 aa24.67■■□□□ 1.54
MCF2L2-209ENST00000475664 RBL2Q08999 1139 aa24.67■■□□□ 1.54
MCF2L2-209ENST00000475664 MKRN4PQ13434 485 aaPredicted RBP24.67■■□□□ 1.54
MCF2L2-209ENST00000475664 MCM6Q14566 821 aa24.67■■□□□ 1.54
MCF2L2-209ENST00000475664 RPAINQ86UA6 219 aa24.67■■□□□ 1.54
MCF2L2-209ENST00000475664 METTL13Q8N6R0 699 aa24.67■■□□□ 1.54
MCF2L2-209ENST00000475664 DHX58Q96C10 678 aa24.67■■□□□ 1.54
MCF2L2-209ENST00000475664 FAM49AQ9H0Q0 323 aaPredicted RBP24.67■■□□□ 1.54
MCF2L2-209ENST00000475664 ATP6V0A4Q9HBG4 840 aa24.67■■□□□ 1.54
MCF2L2-209ENST00000475664 TMEM39AQ9NV64 488 aa24.67■■□□□ 1.54
MCF2L2-209ENST00000475664 KIAA0355O15063 1070 aa24.66■■□□□ 1.54
MCF2L2-209ENST00000475664 GAS2O43903 313 aaKnown RBP24.66■■□□□ 1.54
MCF2L2-209ENST00000475664 EVI5O60447 810 aa24.66■■□□□ 1.54
MCF2L2-209ENST00000475664 SSBP05455 408 aaKnown RBP eCLIP24.66■■□□□ 1.54
MCF2L2-209ENST00000475664 CYP11B2P19099 503 aa24.66■■□□□ 1.54
MCF2L2-209ENST00000475664 DRP2Q13474 957 aa24.66■■□□□ 1.54
MCF2L2-209ENST00000475664 RINT1Q6NUQ1 792 aa24.66■■□□□ 1.54
MCF2L2-209ENST00000475664 SH3RF1Q7Z6J0 888 aa24.66■■□□□ 1.54
MCF2L2-209ENST00000475664 C7orf61Q8IZ16 206 aa24.66■■□□□ 1.54
MCF2L2-209ENST00000475664 KIAA0319LQ8IZA0 1049 aa24.66■■□□□ 1.54
MCF2L2-209ENST00000475664 IQUBQ8NA54 791 aa24.66■■□□□ 1.54
MCF2L2-209ENST00000475664 CAGE1Q8TC20 777 aa24.66■■□□□ 1.54
MCF2L2-209ENST00000475664 DNAJB3Q8WWF6 145 aa24.66■■□□□ 1.54
MCF2L2-209ENST00000475664 MTRQ99707 1265 aa24.66■■□□□ 1.54
MCF2L2-209ENST00000475664 PYM1Q9BRP8 204 aaKnown RBP24.66■■□□□ 1.54
MCF2L2-209ENST00000475664 NOC4LQ9BVI4 516 aaKnown RBP24.66■■□□□ 1.54
MCF2L2-209ENST00000475664 RUSC1Q9BVN2 902 aa24.66■■□□□ 1.54
MCF2L2-209ENST00000475664 CUEDC2Q9H467 287 aa24.66■■□□□ 1.54
MCF2L2-209ENST00000475664 SUGCTQ9HAC7 445 aa24.66■■□□□ 1.54
MCF2L2-209ENST00000475664 SIP14410 1827 aa24.65■■□□□ 1.54
MCF2L2-209ENST00000475664 RPLP2P05387 115 aaKnown RBP24.65■■□□□ 1.54
MCF2L2-209ENST00000475664 C1orf186Q6ZWK4 172 aa24.65■■□□□ 1.54
MCF2L2-209ENST00000475664 MCPH1Q8NEM0 835 aa24.65■■□□□ 1.54
MCF2L2-209ENST00000475664 LTBP2Q14767 1821 aa24.64■■□□□ 1.54
MCF2L2-209ENST00000475664 TRIM43BA6NCK2 446 aa24.64■■□□□ 1.54
MCF2L2-209ENST00000475664 PITPNM1O00562 1244 aa24.64■■□□□ 1.54
MCF2L2-209ENST00000475664 CAND2O75155 1236 aa24.64■■□□□ 1.54
MCF2L2-209ENST00000475664 PRPF40AO75400 957 aaKnown RBP24.64■■□□□ 1.54
MCF2L2-209ENST00000475664 TMOD1P28289 359 aa24.64■■□□□ 1.54
MCF2L2-209ENST00000475664 SYKP43405 635 aa24.64■■□□□ 1.54
MCF2L2-209ENST00000475664 BFSP2Q13515 415 aa24.64■■□□□ 1.54
MCF2L2-209ENST00000475664 DHX8Q14562 1220 aaKnown RBP24.64■■□□□ 1.54
MCF2L2-209ENST00000475664 GPBP1Q86WP2 473 aa24.64■■□□□ 1.54
MCF2L2-209ENST00000475664 CCDC155Q8N6L0 562 aa24.64■■□□□ 1.54
MCF2L2-209ENST00000475664 DPF3Q92784 378 aa24.64■■□□□ 1.54
MCF2L2-209ENST00000475664 TMEM143Q96AN5 459 aa24.64■■□□□ 1.54
MCF2L2-209ENST00000475664 TRIM43Q96BQ3 446 aaPredicted RBP24.64■■□□□ 1.54
MCF2L2-209ENST00000475664 HIPK3Q9H422 1215 aa24.64■■□□□ 1.54
MCF2L2-209ENST00000475664 PRDM5Q9NQX1 630 aaPredicted RBP24.64■■□□□ 1.54
MCF2L2-209ENST00000475664 KCND2Q9NZV8 630 aa24.64■■□□□ 1.54
MCF2L2-209ENST00000475664 ACTN4O43707 911 aaKnown RBP24.63■■□□□ 1.53
MCF2L2-209ENST00000475664 CKBP12277 381 aa24.63■■□□□ 1.53
MCF2L2-209ENST00000475664 GUCY2CP25092 1073 aa24.63■■□□□ 1.53
MCF2L2-209ENST00000475664 THPOP40225 353 aa24.63■■□□□ 1.53
MCF2L2-209ENST00000475664 DNM2P50570 870 aa24.63■■□□□ 1.53
MCF2L2-209ENST00000475664 UBE2HP62256 183 aa24.63■■□□□ 1.53
MCF2L2-209ENST00000475664 ARSHQ5FYA8 562 aa24.63■■□□□ 1.53
MCF2L2-209ENST00000475664 IER5Q5VY09 327 aa24.63■■□□□ 1.53
MCF2L2-209ENST00000475664 SV2BQ7L1I2 683 aa24.63■■□□□ 1.53
MCF2L2-209ENST00000475664 RSPH3Q86UC2 560 aa24.63■■□□□ 1.53
MCF2L2-209ENST00000475664 NME8Q8N427 588 aa24.63■■□□□ 1.53
MCF2L2-209ENST00000475664 TCP11Q8WWU5 503 aa24.63■■□□□ 1.53
MCF2L2-209ENST00000475664 MAP7D2Q96T17 732 aa24.63■■□□□ 1.53
MCF2L2-209ENST00000475664 MAGEF1Q9HAY2 307 aa24.63■■□□□ 1.53
MCF2L2-209ENST00000475664 USP25Q9UHP3 1055 aa24.63■■□□□ 1.53
MCF2L2-209ENST00000475664 UMODL1Q5DID0 1318 aa24.62■■□□□ 1.53
MCF2L2-209ENST00000475664 TRAF7Q6Q0C0 670 aa24.62■■□□□ 1.53
MCF2L2-209ENST00000475664 FMR1NBQ8N0W7 255 aaPredicted RBP24.62■■□□□ 1.53
MCF2L2-209ENST00000475664 ENGASEQ8NFI3 743 aa24.62■■□□□ 1.53
MCF2L2-209ENST00000475664 PPP1R12CQ9BZL4 782 aa24.62■■□□□ 1.53
MCF2L2-209ENST00000475664 GPRC5CQ9NQ84 441 aa24.62■■□□□ 1.53
MCF2L2-209ENST00000475664 KBTBD4Q9NVX7 518 aa24.62■■□□□ 1.53
MCF2L2-209ENST00000475664 SUCLA2Q9P2R7 463 aaPredicted RBP24.62■■□□□ 1.53
MCF2L2-209ENST00000475664 SERTAD1Q9UHV2 236 aa24.62■■□□□ 1.53
MCF2L2-209ENST00000475664 AKT3Q9Y243 479 aa24.62■■□□□ 1.53
MCF2L2-209ENST00000475664 MYH11P35749 1972 aa24.62■■□□□ 1.53
MCF2L2-209ENST00000475664 VTNP04004 478 aa24.61■■□□□ 1.53
MCF2L2-209ENST00000475664 SLFN14P0C7P3 912 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms