RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 HSD17B14Q9BPX1 270 aa7.83□□□□□ -1.16
SHQ1-207ENST00000475558 C7orf25Q9BPX7 421 aa7.83□□□□□ -1.16
SHQ1-207ENST00000475558 TIPINQ9BVW5 301 aa7.83□□□□□ -1.16
SHQ1-207ENST00000475558 GOLPH3LQ9H4A5 285 aa7.83□□□□□ -1.16
SHQ1-207ENST00000475558 ZSWIM4Q9H7M6 989 aa7.83□□□□□ -1.16
SHQ1-207ENST00000475558 AGO4Q9HCK5 861 aaKnown RBP7.83□□□□□ -1.16
SHQ1-207ENST00000475558 KBTBD4Q9NVX7 518 aa7.83□□□□□ -1.16
SHQ1-207ENST00000475558 TUBE1Q9UJT0 475 aa7.83□□□□□ -1.16
SHQ1-207ENST00000475558 PPME1Q9Y570 386 aa7.83□□□□□ -1.16
SHQ1-207ENST00000475558 PCDHA10Q9Y5I2 948 aa7.83□□□□□ -1.16
SHQ1-207ENST00000475558 MYH8P13535 1937 aa7.83□□□□□ -1.16
SHQ1-207ENST00000475558 COL11A1P12107 1806 aaPredicted RBP7.82□□□□□ -1.16
SHQ1-207ENST00000475558 PARP14Q460N5 1801 aa7.82□□□□□ -1.16
SHQ1-207ENST00000475558 A0A0U1RQG5 324 aaPredicted RBP7.82□□□□□ -1.16
SHQ1-207ENST00000475558 GRXCR1A8MXD5 290 aa7.82□□□□□ -1.16
SHQ1-207ENST00000475558 WDR64B1ANS9 1081 aa7.82□□□□□ -1.16
SHQ1-207ENST00000475558 ARVCFO00192 962 aa7.82□□□□□ -1.16
SHQ1-207ENST00000475558 ADAMTS3O15072 1205 aa7.82□□□□□ -1.16
SHQ1-207ENST00000475558 NKRFO15226 690 aaKnown RBP eCLIP7.82□□□□□ -1.16
SHQ1-207ENST00000475558 SNAI1O95863 264 aaPredicted RBP7.82□□□□□ -1.16
SHQ1-207ENST00000475558 ASGR1P07306 291 aa7.82□□□□□ -1.16
SHQ1-207ENST00000475558 PSAPP07602 524 aa7.82□□□□□ -1.16
SHQ1-207ENST00000475558 C6orf222P0C671 652 aaPredicted RBP7.82□□□□□ -1.16
SHQ1-207ENST00000475558 CSF2RAP15509 400 aa7.82□□□□□ -1.16
SHQ1-207ENST00000475558 ITGB5P18084 799 aa7.82□□□□□ -1.16
SHQ1-207ENST00000475558 EIF2AK2P19525 551 aaKnown RBP7.82□□□□□ -1.16
SHQ1-207ENST00000475558 IGFBP4P22692 258 aa7.82□□□□□ -1.16
SHQ1-207ENST00000475558 ERCC5P28715 1186 aaPredicted RBP7.82□□□□□ -1.16
SHQ1-207ENST00000475558 PLA2G5P39877 138 aa7.82□□□□□ -1.16
SHQ1-207ENST00000475558 SARSP49591 514 aaKnown RBP7.82□□□□□ -1.16
SHQ1-207ENST00000475558 ALDH5A1P51649 535 aaPredicted RBP7.82□□□□□ -1.16
SHQ1-207ENST00000475558 NLRP12P59046 1061 aa7.82□□□□□ -1.16
SHQ1-207ENST00000475558 MRPS9P82933 396 aaKnown RBP7.82□□□□□ -1.16
SHQ1-207ENST00000475558 STIM1Q13586 685 aa7.82□□□□□ -1.16
SHQ1-207ENST00000475558 KCNB1Q14721 858 aa7.82□□□□□ -1.16
SHQ1-207ENST00000475558 E2F4Q16254 413 aa7.82□□□□□ -1.16
SHQ1-207ENST00000475558 STX1AQ16623 288 aa7.82□□□□□ -1.16
SHQ1-207ENST00000475558 SPECC1Q5M775 1068 aa7.82□□□□□ -1.16
SHQ1-207ENST00000475558 MIS18BP1Q6P0N0 1132 aa7.82□□□□□ -1.16
SHQ1-207ENST00000475558 SPATA20Q8TB22 786 aa7.82□□□□□ -1.16
SHQ1-207ENST00000475558 SNX29Q8TEQ0 813 aa7.82□□□□□ -1.16
SHQ1-207ENST00000475558 HERVK_113Q902F9 699 aa7.82□□□□□ -1.16
SHQ1-207ENST00000475558 LENG1Q96BZ8 264 aaPredicted RBP7.82□□□□□ -1.16
SHQ1-207ENST00000475558 BPIFA3Q9BQP9 254 aa7.82□□□□□ -1.16
SHQ1-207ENST00000475558 C1QTNF1Q9BXJ1 281 aa7.82□□□□□ -1.16
SHQ1-207ENST00000475558 PANK2Q9BZ23 570 aa7.82□□□□□ -1.16
SHQ1-207ENST00000475558 SLC28A3Q9HAS3 691 aa7.82□□□□□ -1.16
SHQ1-207ENST00000475558 VTA1Q9NP79 307 aa7.82□□□□□ -1.16
SHQ1-207ENST00000475558 COL20A1Q9P218 1284 aa7.82□□□□□ -1.16
SHQ1-207ENST00000475558 SERTAD1Q9UHV2 236 aa7.82□□□□□ -1.16
SHQ1-207ENST00000475558 ZHX1Q9UKY1 873 aaPredicted RBP7.82□□□□□ -1.16
SHQ1-207ENST00000475558 BECN2A8MW95 431 aa7.81□□□□□ -1.16
SHQ1-207ENST00000475558 WNT7AO00755 349 aa7.81□□□□□ -1.16
SHQ1-207ENST00000475558 ACTN4O43707 911 aaKnown RBP7.81□□□□□ -1.16
SHQ1-207ENST00000475558 FGFR1OPO95684 399 aaKnown RBP7.81□□□□□ -1.16
SHQ1-207ENST00000475558 FGBP02675 491 aa7.81□□□□□ -1.16
SHQ1-207ENST00000475558 ARP10275 920 aa7.81□□□□□ -1.16
SHQ1-207ENST00000475558 QARSP47897 775 aaKnown RBP7.81□□□□□ -1.16
SHQ1-207ENST00000475558 SLC26A2P50443 739 aa7.81□□□□□ -1.16
SHQ1-207ENST00000475558 GJA9P57773 515 aa7.81□□□□□ -1.16
SHQ1-207ENST00000475558 PSMC5P62195 406 aa7.81□□□□□ -1.16
SHQ1-207ENST00000475558 ACVR2BQ13705 512 aa7.81□□□□□ -1.16
SHQ1-207ENST00000475558 LAMC2Q13753 1193 aa7.81□□□□□ -1.16
SHQ1-207ENST00000475558 ADGRE1Q14246 886 aa7.81□□□□□ -1.16
SHQ1-207ENST00000475558 TTLL4Q14679 1199 aa7.81□□□□□ -1.16
SHQ1-207ENST00000475558 KARSQ15046 597 aaKnown RBP7.81□□□□□ -1.16
SHQ1-207ENST00000475558 CCDC85BQ15834 202 aaPredicted RBP7.81□□□□□ -1.16
SHQ1-207ENST00000475558 AAK1Q2M2I8 961 aa7.81□□□□□ -1.16
SHQ1-207ENST00000475558 GNASQ5JWF2 1037 aa7.81□□□□□ -1.16
SHQ1-207ENST00000475558 IQSEC1Q6DN90 963 aa7.81□□□□□ -1.16
SHQ1-207ENST00000475558 B3GNT9Q6UX72 402 aa7.81□□□□□ -1.16
SHQ1-207ENST00000475558 STXBP4Q6ZWJ1 553 aa7.81□□□□□ -1.16
SHQ1-207ENST00000475558 MIER3Q7Z3K6 550 aa7.81□□□□□ -1.16
SHQ1-207ENST00000475558 CATSPER3Q86XQ3 398 aa7.81□□□□□ -1.16
SHQ1-207ENST00000475558 C4orf19Q8IY42 314 aa7.81□□□□□ -1.16
SHQ1-207ENST00000475558 PDILTQ8N807 584 aa7.81□□□□□ -1.16
SHQ1-207ENST00000475558 SYT2Q8N9I0 419 aaPredicted RBP7.81□□□□□ -1.16
SHQ1-207ENST00000475558 FAM200AQ8TCP9 573 aa7.81□□□□□ -1.16
SHQ1-207ENST00000475558 SCFD2Q8WU76 684 aa7.81□□□□□ -1.16
SHQ1-207ENST00000475558 LARP4BQ92615 738 aaKnown RBP7.81□□□□□ -1.16
SHQ1-207ENST00000475558 ATP6V0A1Q93050 837 aa7.81□□□□□ -1.16
SHQ1-207ENST00000475558 EIF2AK1Q9BQI3 630 aaKnown RBP7.81□□□□□ -1.16
SHQ1-207ENST00000475558 PPP1R12CQ9BZL4 782 aa7.81□□□□□ -1.16
SHQ1-207ENST00000475558 UPF3AQ9H1J1 476 aaKnown RBP7.81□□□□□ -1.16
SHQ1-207ENST00000475558 ABHD16BQ9H3Z7 469 aa7.81□□□□□ -1.16
SHQ1-207ENST00000475558 IL23AQ9NPF7 189 aa7.81□□□□□ -1.16
SHQ1-207ENST00000475558 NRBP2Q9NSY0 501 aa7.81□□□□□ -1.16
SHQ1-207ENST00000475558 ANKEF1Q9NU02 776 aa7.81□□□□□ -1.16
SHQ1-207ENST00000475558 CXXC1Q9P0U4 656 aaPredicted RBP7.81□□□□□ -1.16
SHQ1-207ENST00000475558 RAPGEFL1Q9UHV5 662 aa7.81□□□□□ -1.16
SHQ1-207ENST00000475558 PCDHA5Q9Y5H7 936 aa7.81□□□□□ -1.16
SHQ1-207ENST00000475558 BDP1A6H8Y1 2624 aa7.81□□□□□ -1.16
SHQ1-207ENST00000475558 MYADML2A6NDP7 307 aa7.8□□□□□ -1.16
SHQ1-207ENST00000475558 SOWAHBA6NEL2 793 aa7.8□□□□□ -1.16
SHQ1-207ENST00000475558 GOLGA6L19H0YKK7 550 aa7.8□□□□□ -1.16
SHQ1-207ENST00000475558 IKBKBO14920 756 aa7.8□□□□□ -1.16
SHQ1-207ENST00000475558 DHX15O43143 795 aaKnown RBP7.8□□□□□ -1.16
SHQ1-207ENST00000475558 CABYRO75952 493 aa7.8□□□□□ -1.16
SHQ1-207ENST00000475558 SLITRK3O94933 977 aa7.8□□□□□ -1.16
SHQ1-207ENST00000475558 ATG7O95352 703 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms