RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 ADGRD2Q7Z7M1 963 aa7.95□□□□□ -1.14
HDAC3-207ENST00000475549 SMAP1Q8IYB5 467 aaPredicted RBP7.95□□□□□ -1.14
HDAC3-207ENST00000475549 LRRC71Q8N4P6 559 aa7.95□□□□□ -1.14
HDAC3-207ENST00000475549 METTL13Q8N6R0 699 aa7.95□□□□□ -1.14
HDAC3-207ENST00000475549 TBCKQ8TEA7 893 aa7.95□□□□□ -1.14
HDAC3-207ENST00000475549 CCDC12Q8WUD4 166 aaPredicted RBP7.95□□□□□ -1.14
HDAC3-207ENST00000475549 ZNF274Q96GC6 653 aaPredicted RBP7.95□□□□□ -1.14
HDAC3-207ENST00000475549 ZNF668Q96K58 619 aaPredicted RBP7.95□□□□□ -1.14
HDAC3-207ENST00000475549 RIT2Q99578 217 aa7.95□□□□□ -1.14
HDAC3-207ENST00000475549 SH2D3AQ9BRG2 576 aa7.95□□□□□ -1.14
HDAC3-207ENST00000475549 LMAN2LQ9H0V9 348 aa7.95□□□□□ -1.14
HDAC3-207ENST00000475549 UNC45AQ9H3U1 944 aa7.95□□□□□ -1.14
HDAC3-207ENST00000475549 IGFLR1Q9H665 355 aa7.95□□□□□ -1.14
HDAC3-207ENST00000475549 DISC1Q9NRI5 854 aa7.95□□□□□ -1.14
HDAC3-207ENST00000475549 GJB4Q9NTQ9 266 aa7.95□□□□□ -1.14
HDAC3-207ENST00000475549 RNF19AQ9NV58 838 aa7.95□□□□□ -1.14
HDAC3-207ENST00000475549 TYW1Q9NV66 732 aaKnown RBP7.95□□□□□ -1.14
HDAC3-207ENST00000475549 CLDND1Q9NY35 253 aa7.95□□□□□ -1.14
HDAC3-207ENST00000475549 CLEC1BQ9P126 229 aa7.95□□□□□ -1.14
HDAC3-207ENST00000475549 PCDHA4Q9UN74 947 aa7.95□□□□□ -1.14
HDAC3-207ENST00000475549 RWDD3Q9Y3V2 267 aa7.95□□□□□ -1.14
HDAC3-207ENST00000475549 COL4A4P53420 1690 aaPredicted RBP7.95□□□□□ -1.14
HDAC3-207ENST00000475549 COL1A2P08123 1366 aa7.95□□□□□ -1.14
HDAC3-207ENST00000475549 FAM86C2PA6NEL3 165 aa7.94□□□□□ -1.14
HDAC3-207ENST00000475549 C19orf67A6NJJ6 358 aa7.94□□□□□ -1.14
HDAC3-207ENST00000475549 WDR64B1ANS9 1081 aa7.94□□□□□ -1.14
HDAC3-207ENST00000475549 GPR182O15218 404 aa7.94□□□□□ -1.14
HDAC3-207ENST00000475549 EPB41L2O43491 1005 aaKnown RBP7.94□□□□□ -1.14
HDAC3-207ENST00000475549 CHMP2AO43633 222 aa7.94□□□□□ -1.14
HDAC3-207ENST00000475549 GPR37L1O60883 481 aa7.94□□□□□ -1.14
HDAC3-207ENST00000475549 TBX10O75333 385 aa7.94□□□□□ -1.14
HDAC3-207ENST00000475549 CSDE1O75534 798 aaKnown RBP7.94□□□□□ -1.14
HDAC3-207ENST00000475549 STAG3L1P0CL83 205 aa7.94□□□□□ -1.14
HDAC3-207ENST00000475549 FGFR1P11362 822 aa7.94□□□□□ -1.14
HDAC3-207ENST00000475549 IBSPP21815 317 aaPredicted RBP7.94□□□□□ -1.14
HDAC3-207ENST00000475549 NLRP11P59045 1033 aaKnown RBP7.94□□□□□ -1.14
HDAC3-207ENST00000475549 NLRP5P59047 1200 aa7.94□□□□□ -1.14
HDAC3-207ENST00000475549 ERVFC1P60507 584 aa7.94□□□□□ -1.14
HDAC3-207ENST00000475549 RBM10P98175 930 aaKnown RBP7.94□□□□□ -1.14
HDAC3-207ENST00000475549 AKAP17AQ02040 695 aaKnown RBP7.94□□□□□ -1.14
HDAC3-207ENST00000475549 ZP2Q05996 745 aa7.94□□□□□ -1.14
HDAC3-207ENST00000475549 STK3Q13188 491 aa7.94□□□□□ -1.14
HDAC3-207ENST00000475549 CLUL1Q15846 466 aa7.94□□□□□ -1.14
HDAC3-207ENST00000475549 SLC24A5Q71RS6 500 aa7.94□□□□□ -1.14
HDAC3-207ENST00000475549 CKAP2LQ8IYA6 745 aa7.94□□□□□ -1.14
HDAC3-207ENST00000475549 ETNPPLQ8TBG4 499 aa7.94□□□□□ -1.14
HDAC3-207ENST00000475549 BICD2Q8TD16 824 aa7.94□□□□□ -1.14
HDAC3-207ENST00000475549 POF1BQ8WVV4 589 aa7.94□□□□□ -1.14
HDAC3-207ENST00000475549 P2RX5Q93086 422 aa7.94□□□□□ -1.14
HDAC3-207ENST00000475549 MSLNLQ96KJ4 702 aa7.94□□□□□ -1.14
HDAC3-207ENST00000475549 MBOAT7Q96N66 472 aa7.94□□□□□ -1.14
HDAC3-207ENST00000475549 TM6SF1Q9BZW5 370 aa7.94□□□□□ -1.14
HDAC3-207ENST00000475549 CWH43Q9H720 699 aa7.94□□□□□ -1.14
HDAC3-207ENST00000475549 TPCN1Q9ULQ1 816 aa7.94□□□□□ -1.14
HDAC3-207ENST00000475549 KCNJ14Q9UNX9 436 aa7.94□□□□□ -1.14
HDAC3-207ENST00000475549 SAMM50Q9Y512 469 aa7.94□□□□□ -1.14
HDAC3-207ENST00000475549 PCDHB7Q9Y5E2 793 aa7.94□□□□□ -1.14
HDAC3-207ENST00000475549 CYP46A1Q9Y6A2 500 aa7.94□□□□□ -1.14
HDAC3-207ENST00000475549 BRWD1Q9NSI6 2320 aa7.94□□□□□ -1.14
HDAC3-207ENST00000475549 TCF20Q9UGU0 1960 aaKnown RBP7.93□□□□□ -1.14
HDAC3-207ENST00000475549 IGKV6-21A0A0C4DH24 114 aa7.93□□□□□ -1.14
HDAC3-207ENST00000475549 DENND3A2RUS2 1198 aa7.93□□□□□ -1.14
HDAC3-207ENST00000475549 TBKBP1A7MCY6 615 aa7.93□□□□□ -1.14
HDAC3-207ENST00000475549 EML1O00423 815 aa7.93□□□□□ -1.14
HDAC3-207ENST00000475549 PER2O15055 1255 aa7.93□□□□□ -1.14
HDAC3-207ENST00000475549 MAGEB2O15479 319 aa7.93□□□□□ -1.14
HDAC3-207ENST00000475549 MBTPS2O43462 519 aa7.93□□□□□ -1.14
HDAC3-207ENST00000475549 NCK2O43639 380 aa7.93□□□□□ -1.14
HDAC3-207ENST00000475549 SLC37A4O43826 429 aa7.93□□□□□ -1.14
HDAC3-207ENST00000475549 GAS7O60861 476 aa7.93□□□□□ -1.14
HDAC3-207ENST00000475549 DEXIO95424 95 aa7.93□□□□□ -1.14
HDAC3-207ENST00000475549 CTDNEP1O95476 244 aa7.93□□□□□ -1.14
HDAC3-207ENST00000475549 GLP2RO95838 553 aa7.93□□□□□ -1.14
HDAC3-207ENST00000475549 OATP04181 439 aa7.93□□□□□ -1.14
HDAC3-207ENST00000475549 FGFR4P22455 802 aa7.93□□□□□ -1.14
HDAC3-207ENST00000475549 EIF4BP23588 611 aaKnown RBP7.93□□□□□ -1.14
HDAC3-207ENST00000475549 PRKCEQ02156 737 aa7.93□□□□□ -1.14
HDAC3-207ENST00000475549 SSRP1Q08945 709 aaKnown RBP7.93□□□□□ -1.14
HDAC3-207ENST00000475549 SCRN1Q12765 414 aa7.93□□□□□ -1.14
HDAC3-207ENST00000475549 SMAD2Q15796 467 aaKnown RBP7.93□□□□□ -1.14
HDAC3-207ENST00000475549 PUS10Q3MIT2 529 aaKnown RBP7.93□□□□□ -1.14
HDAC3-207ENST00000475549 NAALADL2Q58DX5 795 aa7.93□□□□□ -1.14
HDAC3-207ENST00000475549 EARS2Q5JPH6 523 aaKnown RBP7.93□□□□□ -1.14
HDAC3-207ENST00000475549 TMEM31Q5JXX7 168 aa7.93□□□□□ -1.14
HDAC3-207ENST00000475549 LRCH2Q5VUJ6 765 aa7.93□□□□□ -1.14
HDAC3-207ENST00000475549 RBM23Q86U06 439 aaKnown RBP7.93□□□□□ -1.14
HDAC3-207ENST00000475549 BLIDQ8IZY5 108 aa7.93□□□□□ -1.14
HDAC3-207ENST00000475549 DAGLBQ8NCG7 672 aa7.93□□□□□ -1.14
HDAC3-207ENST00000475549 CCDC148Q8NFR7 591 aa7.93□□□□□ -1.14
HDAC3-207ENST00000475549 VN1R2Q8NFZ6 395 aa7.93□□□□□ -1.14
HDAC3-207ENST00000475549 OXER1Q8TDS5 423 aa7.93□□□□□ -1.14
HDAC3-207ENST00000475549 CASD1Q96PB1 797 aa7.93□□□□□ -1.14
HDAC3-207ENST00000475549 NIFKQ9BYG3 293 aaKnown RBP7.93□□□□□ -1.14
HDAC3-207ENST00000475549 C1orf112Q9NSG2 853 aa7.93□□□□□ -1.14
HDAC3-207ENST00000475549 PDRG1Q9NUG6 133 aa7.93□□□□□ -1.14
HDAC3-207ENST00000475549 WRAP73Q9P2S5 460 aaPredicted RBP7.93□□□□□ -1.14
HDAC3-207ENST00000475549 LRFN2Q9ULH4 789 aa7.93□□□□□ -1.14
HDAC3-207ENST00000475549 CEP131Q9UPN4 1083 aa7.93□□□□□ -1.14
HDAC3-207ENST00000475549 SSUH2Q9Y2M2 353 aa7.93□□□□□ -1.14
HDAC3-207ENST00000475549 TRIOO75962 3097 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms